RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CHGAP10645 457 aaKnown RBP24.48■■□□□ 1.51
RNF40-206ENST00000564260 KIF1BO60333 1816 aa24.47■■□□□ 1.51
RNF40-206ENST00000564260 LTKP29376 864 aa24.46■■□□□ 1.51
RNF40-206ENST00000564260 SPATA31E1Q6ZUB1 1445 aa24.44■■□□□ 1.5
RNF40-206ENST00000564260 PLEKHG1Q9ULL1 1385 aa24.44■■□□□ 1.5
RNF40-206ENST00000564260 IQGAP1P46940 1657 aa24.43■■□□□ 1.5
RNF40-206ENST00000564260 PPP1R15AO75807 674 aaPredicted RBP24.41■■□□□ 1.5
RNF40-206ENST00000564260 ZNF326Q5BKZ1 582 aaKnown RBP24.41■■□□□ 1.5
RNF40-206ENST00000564260 MYO5BQ9ULV0 1848 aa24.4■■□□□ 1.5
RNF40-206ENST00000564260 VGFO15240 615 aaPredicted RBP24.39■■□□□ 1.49
RNF40-206ENST00000564260 STAC3Q96MF2 364 aa24.39■■□□□ 1.49
RNF40-206ENST00000564260 NEXMIFQ5QGS0 1516 aa24.39■■□□□ 1.49
RNF40-206ENST00000564260 DHX57Q6P158 1386 aaKnown RBP24.38■■□□□ 1.49
RNF40-206ENST00000564260 PCGF6Q9BYE7 350 aa24.37■■□□□ 1.49
RNF40-206ENST00000564260 DIP2AQ14689 1571 aa24.36■■□□□ 1.49
RNF40-206ENST00000564260 SETBP1Q9Y6X0 1596 aa24.33■■□□□ 1.49
RNF40-206ENST00000564260 PIK3R4Q99570 1358 aa24.32■■□□□ 1.48
RNF40-206ENST00000564260 TBX22Q9Y458 520 aa24.32■■□□□ 1.48
RNF40-206ENST00000564260 MYOM2P54296 1465 aa24.29■■□□□ 1.48
RNF40-206ENST00000564260 CPS1P31327 1500 aa24.29■■□□□ 1.48
RNF40-206ENST00000564260 PPLO60437 1756 aa24.29■■□□□ 1.48
RNF40-206ENST00000564260 CLSPNQ9HAW4 1339 aa24.28■■□□□ 1.48
RNF40-206ENST00000564260 ADAMTS13Q76LX8 1427 aa24.27■■□□□ 1.48
RNF40-206ENST00000564260 IQSEC2Q5JU85 1478 aa24.26■■□□□ 1.47
RNF40-206ENST00000564260 RGL3Q3MIN7 710 aa24.26■■□□□ 1.47
RNF40-206ENST00000564260 BCANQ96GW7 911 aa24.26■■□□□ 1.47
RNF40-206ENST00000564260 IFT172Q9UG01 1749 aa24.26■■□□□ 1.47
RNF40-206ENST00000564260 LTBP4Q8N2S1 1624 aa24.25■■□□□ 1.47
RNF40-206ENST00000564260 NRXN1Q9ULB1 1477 aa24.24■■□□□ 1.47
RNF40-206ENST00000564260 ZNF335Q9H4Z2 1342 aaPredicted RBP24.23■■□□□ 1.47
RNF40-206ENST00000564260 KCNA6P17658 529 aa24.22■■□□□ 1.47
RNF40-206ENST00000564260 SLC26A8Q96RN1 970 aa24.22■■□□□ 1.47
RNF40-206ENST00000564260 NRXN3Q9Y4C0 1643 aa24.21■■□□□ 1.47
RNF40-206ENST00000564260 NKTRP30414 1462 aaKnown RBP24.21■■□□□ 1.47
RNF40-206ENST00000564260 PIK3C2GO75747 1445 aa24.21■■□□□ 1.47
RNF40-206ENST00000564260 NUTM2DQ5VT03 806 aaPredicted RBP24.21■■□□□ 1.47
RNF40-206ENST00000564260 NWD1Q149M9 1564 aa24.2■■□□□ 1.47
RNF40-206ENST00000564260 PRAG1Q86YV5 1406 aa24.17■■□□□ 1.46
RNF40-206ENST00000564260 ADGRF5Q8IZF2 1346 aa24.16■■□□□ 1.46
RNF40-206ENST00000564260 CERKQ8TCT0 537 aa24.16■■□□□ 1.46
RNF40-206ENST00000564260 ALKQ9UM73 1620 aa24.15■■□□□ 1.46
RNF40-206ENST00000564260 LAMC1P11047 1609 aa24.14■■□□□ 1.46
RNF40-206ENST00000564260 DCAF11Q8TEB1 546 aa24.14■■□□□ 1.45
RNF40-206ENST00000564260 NCOA3Q9Y6Q9 1424 aa24.14■■□□□ 1.45
RNF40-206ENST00000564260 CHD2O14647 1828 aaKnown RBP24.12■■□□□ 1.45
RNF40-206ENST00000564260 C14orf93Q9H972 538 aaKnown RBP24.11■■□□□ 1.45
RNF40-206ENST00000564260 METP08581 1390 aa24.1■■□□□ 1.45
RNF40-206ENST00000564260 SETD1AO15047 1707 aaKnown RBP24.1■■□□□ 1.45
RNF40-206ENST00000564260 LRRC7Q96NW7 1537 aa24.1■■□□□ 1.45
RNF40-206ENST00000564260 SIN3AQ96ST3 1273 aa24.09■■□□□ 1.45
RNF40-206ENST00000564260 TIMELESSQ9UNS1 1208 aa24.08■■□□□ 1.45
RNF40-206ENST00000564260 AMOTL2Q9Y2J4 779 aa24.07■■□□□ 1.44
RNF40-206ENST00000564260 PTCH1Q13635 1447 aa24.07■■□□□ 1.44
RNF40-206ENST00000564260 XRN1Q8IZH2 1706 aaKnown RBP24.07■■□□□ 1.44
RNF40-206ENST00000564260 STRCP1A6NGW2 1772 aa24.06■■□□□ 1.44
RNF40-206ENST00000564260 TECPR2O15040 1411 aa24.05■■□□□ 1.44
RNF40-206ENST00000564260 PTPRUQ92729 1446 aa24.05■■□□□ 1.44
RNF40-206ENST00000564260 NEUROD1Q13562 356 aa24.05■■□□□ 1.44
RNF40-206ENST00000564260 L3MBTL2Q969R5 705 aa24.05■■□□□ 1.44
RNF40-206ENST00000564260 TONSLQ96HA7 1378 aa24.04■■□□□ 1.44
RNF40-206ENST00000564260 KDM2AQ9Y2K7 1162 aa24.03■■□□□ 1.44
RNF40-206ENST00000564260 LRPPRCP42704 1394 aaKnown RBP24.03■■□□□ 1.44
RNF40-206ENST00000564260 ABCC11Q96J66 1382 aa24.03■■□□□ 1.44
RNF40-206ENST00000564260 PROSER2Q86WR7 435 aaPredicted RBP24.02■■□□□ 1.44
RNF40-206ENST00000564260 SIRT1Q96EB6 747 aa24.01■■□□□ 1.43
RNF40-206ENST00000564260 TMEM94Q12767 1356 aa24.01■■□□□ 1.43
RNF40-206ENST00000564260 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
RNF40-206ENST00000564260 CFAP70Q5T0N1 1121 aa23.99■■□□□ 1.43
RNF40-206ENST00000564260 CCER1Q8TC90 406 aaPredicted RBP23.99■■□□□ 1.43
RNF40-206ENST00000564260 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
RNF40-206ENST00000564260 YTHDC2Q9H6S0 1430 aaKnown RBP23.98■■□□□ 1.43
RNF40-206ENST00000564260 ASXL1Q8IXJ9 1541 aa23.98■■□□□ 1.43
RNF40-206ENST00000564260 ADGRB1O14514 1584 aa23.98■■□□□ 1.43
RNF40-206ENST00000564260 FAM135BQ49AJ0 1406 aa23.97■■□□□ 1.43
RNF40-206ENST00000564260 KNDC1Q76NI1 1749 aa23.96■■□□□ 1.43
RNF40-206ENST00000564260 DCCP43146 1447 aa23.96■■□□□ 1.43
RNF40-206ENST00000564260 FBXO41Q8TF61 875 aa23.96■■□□□ 1.43
RNF40-206ENST00000564260 MSH6P52701 1360 aa23.95■■□□□ 1.42
RNF40-206ENST00000564260 DLC1Q96QB1 1528 aa23.94■■□□□ 1.42
RNF40-206ENST00000564260 TOM1O60784 492 aa23.94■■□□□ 1.42
RNF40-206ENST00000564260 C19orf44Q9H6X5 657 aa23.93■■□□□ 1.42
RNF40-206ENST00000564260 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
RNF40-206ENST00000564260 TMEM132EQ6IEE7 984 aa23.91■■□□□ 1.42
RNF40-206ENST00000564260 ADGRL3Q9HAR2 1447 aa23.91■■□□□ 1.42
RNF40-206ENST00000564260 XIRP1Q702N8 1843 aaKnown RBP23.89■■□□□ 1.42
RNF40-206ENST00000564260 CADPS2Q86UW7 1296 aa23.89■■□□□ 1.41
RNF40-206ENST00000564260 UBAP1LF5GYI3 381 aa23.86■■□□□ 1.41
RNF40-206ENST00000564260 C14orf37Q86TY3 774 aa23.86■■□□□ 1.41
RNF40-206ENST00000564260 GPRASP1Q5JY77 1395 aa23.86■■□□□ 1.41
RNF40-206ENST00000564260 STK26Q9P289 416 aa23.85■■□□□ 1.41
RNF40-206ENST00000564260 TRPM1Q7Z4N2 1603 aa23.84■■□□□ 1.41
RNF40-206ENST00000564260 RALGAPBQ86X10 1494 aa23.83■■□□□ 1.41
RNF40-206ENST00000564260 ATF3P18847 181 aa23.83■■□□□ 1.41
RNF40-206ENST00000564260 ROCK2O75116 1388 aaKnown RBP23.82■■□□□ 1.4
RNF40-206ENST00000564260 CDC42BPGQ6DT37 1551 aa23.8■■□□□ 1.4
RNF40-206ENST00000564260 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.79■■□□□ 1.4
RNF40-206ENST00000564260 NBPF1Q3BBV0 1214 aa23.79■■□□□ 1.4
RNF40-206ENST00000564260 NBPF8Q3BBV2 869 aa23.79■■□□□ 1.4
RNF40-206ENST00000564260 RBM33Q96EV2 1170 aaKnown RBP23.79■■□□□ 1.4
RNF40-206ENST00000564260 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms