RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 PPP1R3GB7ZBB8 358 aa4.79□□□□□ -1.64
CHD9-209ENST00000564255 C3orf80F5H4A9 247 aa4.79□□□□□ -1.64
CHD9-209ENST00000564255 TRIM26Q12899 539 aaPredicted RBP4.79□□□□□ -1.64
CHD9-209ENST00000564255 RSBN1LQ6PCB5 846 aaPredicted RBP4.79□□□□□ -1.64
CHD9-209ENST00000564255 POTEB2H3BUK9 544 aa4.79□□□□□ -1.64
CHD9-209ENST00000564255 RAD21O60216 631 aa4.79□□□□□ -1.64
CHD9-209ENST00000564255 HRCP23327 699 aa4.79□□□□□ -1.64
CHD9-209ENST00000564255 DNAJB2P25686 324 aa4.79□□□□□ -1.64
CHD9-209ENST00000564255 PODXL2Q9NZ53 605 aa4.79□□□□□ -1.64
CHD9-209ENST00000564255 ZNF777Q9ULD5 760 aaPredicted RBP4.79□□□□□ -1.64
CHD9-209ENST00000564255 TRIM6-TRIM34B2RNG4 842 aa4.78□□□□□ -1.64
CHD9-209ENST00000564255 NUDT18Q6ZVK8 323 aa4.78□□□□□ -1.64
CHD9-209ENST00000564255 SULF1Q8IWU6 871 aa4.78□□□□□ -1.64
CHD9-209ENST00000564255 TATDN2Q93075 761 aa4.78□□□□□ -1.64
CHD9-209ENST00000564255 SERPINA10Q9UK55 444 aa4.78□□□□□ -1.64
CHD9-209ENST00000564255 NBPF26B4DH59 902 aa4.78□□□□□ -1.64
CHD9-209ENST00000564255 LILRB3O75022 631 aa4.78□□□□□ -1.64
CHD9-209ENST00000564255 TMEM134Q9H6X4 195 aa4.78□□□□□ -1.64
CHD9-209ENST00000564255 PTPREP23469 700 aa4.77□□□□□ -1.65
CHD9-209ENST00000564255 ATP1B4Q9UN42 357 aaPredicted RBP4.77□□□□□ -1.65
CHD9-209ENST00000564255 MTMR14Q8NCE2 650 aa4.77□□□□□ -1.65
CHD9-209ENST00000564255 SCUBE2Q9NQ36 999 aa4.77□□□□□ -1.65
CHD9-209ENST00000564255 PNMA3Q9UL41 463 aa4.77□□□□□ -1.65
CHD9-209ENST00000564255 MOXD2PA6NHM9 499 aa4.76□□□□□ -1.65
CHD9-209ENST00000564255 MAMSTRQ6ZN01 415 aa4.76□□□□□ -1.65
CHD9-209ENST00000564255 NUTM1Q86Y26 1132 aa4.76□□□□□ -1.65
CHD9-209ENST00000564255 PRPF38BQ5VTL8 546 aaKnown RBP4.75□□□□□ -1.65
CHD9-209ENST00000564255 PACS2Q86VP3 889 aa4.75□□□□□ -1.65
CHD9-209ENST00000564255 POTEMA6NI47 508 aa4.75□□□□□ -1.65
CHD9-209ENST00000564255 DDX11L8A8MPP1 907 aa4.75□□□□□ -1.65
CHD9-209ENST00000564255 HOXB1P14653 301 aaPredicted RBP4.75□□□□□ -1.65
CHD9-209ENST00000564255 NDUFV2P19404 249 aa4.75□□□□□ -1.65
CHD9-209ENST00000564255 ZNF710Q8N1W2 664 aa4.75□□□□□ -1.65
CHD9-209ENST00000564255 RTL5Q5HYW3 569 aaPredicted RBP4.75□□□□□ -1.65
CHD9-209ENST00000564255 TRAIPQ9BWF2 469 aa4.74□□□□□ -1.65
CHD9-209ENST00000564255 ZNF330Q9Y3S2 320 aaPredicted RBP4.74□□□□□ -1.65
CHD9-209ENST00000564255 PDIA4P13667 645 aaKnown RBP4.74□□□□□ -1.65
CHD9-209ENST00000564255 GCGRP47871 477 aa4.74□□□□□ -1.65
CHD9-209ENST00000564255 QPCTQ16769 361 aa4.74□□□□□ -1.65
CHD9-209ENST00000564255 CCDC97Q96F63 343 aaPredicted RBP4.74□□□□□ -1.65
CHD9-209ENST00000564255 PCDHB15Q9Y5E8 787 aa4.74□□□□□ -1.65
CHD9-209ENST00000564255 USP46P62068 366 aa4.73□□□□□ -1.65
CHD9-209ENST00000564255 POTEGQ6S5H5 508 aa4.72□□□□□ -1.65
CHD9-209ENST00000564255 CABLES1Q8TDN4 633 aa4.72□□□□□ -1.65
CHD9-209ENST00000564255 GDPD2Q9HCC8 539 aa4.72□□□□□ -1.65
CHD9-209ENST00000564255 HOXA2O43364 376 aa4.72□□□□□ -1.65
CHD9-209ENST00000564255 KDM4AO75164 1064 aa4.72□□□□□ -1.65
CHD9-209ENST00000564255 PROX2Q3B8N5 592 aa4.72□□□□□ -1.65
CHD9-209ENST00000564255 GJD4Q96KN9 370 aaPredicted RBP4.72□□□□□ -1.65
CHD9-209ENST00000564255 ZBED2Q9BTP6 218 aa4.72□□□□□ -1.65
CHD9-209ENST00000564255 SNPHO15079 494 aa4.71□□□□□ -1.65
CHD9-209ENST00000564255 USP17L8P0C7I0 530 aa4.71□□□□□ -1.65
CHD9-209ENST00000564255 WWC1Q8IX03 1113 aa4.71□□□□□ -1.65
CHD9-209ENST00000564255 SLC4A5Q9BY07 1137 aa4.71□□□□□ -1.65
CHD9-209ENST00000564255 ZBTB3Q9H5J0 574 aa4.71□□□□□ -1.65
CHD9-209ENST00000564255 PRM3Q9NNZ6 103 aa4.71□□□□□ -1.65
CHD9-209ENST00000564255 AP1G2O75843 785 aa4.71□□□□□ -1.66
CHD9-209ENST00000564255 CSPP1Q1MSJ5 1256 aa4.71□□□□□ -1.66
CHD9-209ENST00000564255 RDH13Q8NBN7 331 aa4.71□□□□□ -1.66
CHD9-209ENST00000564255 SMAPO00193 183 aa4.71□□□□□ -1.66
CHD9-209ENST00000564255 NECTIN2Q92692 538 aa4.71□□□□□ -1.66
CHD9-209ENST00000564255 KIAA1468Q9P260 1216 aa4.71□□□□□ -1.66
CHD9-209ENST00000564255 SLC10A3P09131 477 aa4.7□□□□□ -1.66
CHD9-209ENST00000564255 KCNK17Q96T54 332 aa4.7□□□□□ -1.66
CHD9-209ENST00000564255 PCDHGC3Q9UN70 934 aa4.7□□□□□ -1.66
CHD9-209ENST00000564255 TBC1D2BQ9UPU7 963 aa4.7□□□□□ -1.66
CHD9-209ENST00000564255 POM121CA8CG34 1229 aa4.7□□□□□ -1.66
CHD9-209ENST00000564255 RSPH4AQ5TD94 716 aa4.7□□□□□ -1.66
CHD9-209ENST00000564255 NDUFB9Q9Y6M9 179 aa4.7□□□□□ -1.66
CHD9-209ENST00000564255 NUTM2BA6NNL0 878 aaPredicted RBP4.69□□□□□ -1.66
CHD9-209ENST00000564255 NUTM2EB1AL46 878 aaPredicted RBP4.69□□□□□ -1.66
CHD9-209ENST00000564255 FDX1P10109 184 aa4.69□□□□□ -1.66
CHD9-209ENST00000564255 ABL2P42684 1182 aa4.69□□□□□ -1.66
CHD9-209ENST00000564255 IRF5Q13568 498 aa4.69□□□□□ -1.66
CHD9-209ENST00000564255 SWT1Q5T5J6 900 aaKnown RBP4.69□□□□□ -1.66
CHD9-209ENST00000564255 NUTM2DQ5VT03 806 aaPredicted RBP4.69□□□□□ -1.66
CHD9-209ENST00000564255 NUTM2AQ8IVF1 878 aaPredicted RBP4.69□□□□□ -1.66
CHD9-209ENST00000564255 OTUD5Q96G74 571 aa4.69□□□□□ -1.66
CHD9-209ENST00000564255 ZBTB7CA1YPR0 619 aa4.68□□□□□ -1.66
CHD9-209ENST00000564255 GPR37L1O60883 481 aa4.68□□□□□ -1.66
CHD9-209ENST00000564255 PPP1R15AO75807 674 aaPredicted RBP4.68□□□□□ -1.66
CHD9-209ENST00000564255 RABGEF1Q9UJ41 708 aa4.68□□□□□ -1.66
CHD9-209ENST00000564255 GLMNQ92990 594 aa4.68□□□□□ -1.66
CHD9-209ENST00000564255 TRIM34Q9BYJ4 488 aa4.67□□□□□ -1.66
CHD9-209ENST00000564255 GUCA2AQ02747 115 aa4.67□□□□□ -1.66
CHD9-209ENST00000564255 CTDSPL2Q05D32 466 aa4.67□□□□□ -1.66
CHD9-209ENST00000564255 MTMR2Q13614 643 aa4.67□□□□□ -1.66
CHD9-209ENST00000564255 CALR3Q96L12 384 aaKnown RBP4.67□□□□□ -1.66
CHD9-209ENST00000564255 WASHC4Q2M389 1173 aa4.67□□□□□ -1.66
CHD9-209ENST00000564255 POTEEQ6S8J3 1075 aa4.67□□□□□ -1.66
CHD9-209ENST00000564255 KCTD17Q8N5Z5 321 aa4.67□□□□□ -1.66
CHD9-209ENST00000564255 KCNH8Q96L42 1107 aa4.67□□□□□ -1.66
CHD9-209ENST00000564255 ARHGAP33O14559 1287 aa4.66□□□□□ -1.66
CHD9-209ENST00000564255 PSEN2P49810 448 aa4.66□□□□□ -1.66
CHD9-209ENST00000564255 RETREG2Q8NC44 543 aa4.66□□□□□ -1.66
CHD9-209ENST00000564255 ADAMTS19Q8TE59 1207 aa4.66□□□□□ -1.66
CHD9-209ENST00000564255 HLA-CQ95604 372 aa4.66□□□□□ -1.66
CHD9-209ENST00000564255 HMX1Q9NP08 348 aaPredicted RBP4.66□□□□□ -1.66
CHD9-209ENST00000564255 CFAP99D6REC4 459 aa4.66□□□□□ -1.66
CHD9-209ENST00000564255 DMRTA1Q5VZB9 504 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms