RNA–Protein interactions for RNA: ENST00000564201.1

NR4A1-220, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-220ENST00000564201 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
NR4A1-220ENST00000564201 KDM5AP29375 1690 aaKnown RBP17.29■□□□□ 0.36
NR4A1-220ENST00000564201 TMEM2Q9UHN6 1383 aa17.27■□□□□ 0.35
NR4A1-220ENST00000564201 KDM2AQ9Y2K7 1162 aa17.26■□□□□ 0.35
NR4A1-220ENST00000564201 RIMS2Q9UQ26 1411 aa17.26■□□□□ 0.35
NR4A1-220ENST00000564201 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
NR4A1-220ENST00000564201 TXNDC2Q86VQ3 553 aa17.25■□□□□ 0.35
NR4A1-220ENST00000564201 DCAF11Q8TEB1 546 aa17.25■□□□□ 0.35
NR4A1-220ENST00000564201 EID1Q9Y6B2 187 aa17.25■□□□□ 0.35
NR4A1-220ENST00000564201 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
NR4A1-220ENST00000564201 HDGFP51858 240 aaKnown RBP17.24■□□□□ 0.35
NR4A1-220ENST00000564201 ANKLE2Q86XL3 938 aa17.24■□□□□ 0.35
NR4A1-220ENST00000564201 L3MBTL2Q969R5 705 aa17.24■□□□□ 0.35
NR4A1-220ENST00000564201 RPGRIP1LQ68CZ1 1315 aa17.23■□□□□ 0.35
NR4A1-220ENST00000564201 NCKAP5LQ9HCH0 1330 aa17.23■□□□□ 0.35
NR4A1-220ENST00000564201 LTKP29376 864 aa17.23■□□□□ 0.35
NR4A1-220ENST00000564201 NEURL4Q96JN8 1562 aa17.23■□□□□ 0.35
NR4A1-220ENST00000564201 SLIT1O75093 1534 aa17.22■□□□□ 0.35
NR4A1-220ENST00000564201 NEXMIFQ5QGS0 1516 aa17.22■□□□□ 0.35
NR4A1-220ENST00000564201 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.22■□□□□ 0.35
NR4A1-220ENST00000564201 BCANQ96GW7 911 aa17.22■□□□□ 0.35
NR4A1-220ENST00000564201 ARHGAP23Q9P227 1491 aa17.22■□□□□ 0.35
NR4A1-220ENST00000564201 ZFYVE9O95405 1425 aa17.21■□□□□ 0.35
NR4A1-220ENST00000564201 PPLO60437 1756 aa17.21■□□□□ 0.35
NR4A1-220ENST00000564201 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.35
NR4A1-220ENST00000564201 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
NR4A1-220ENST00000564201 SCAF11Q99590 1463 aaKnown RBP17.19■□□□□ 0.34
NR4A1-220ENST00000564201 ADGRF5Q8IZF2 1346 aa17.19■□□□□ 0.34
NR4A1-220ENST00000564201 IFT172Q9UG01 1749 aa17.18■□□□□ 0.34
NR4A1-220ENST00000564201 KCNA4P22459 653 aa17.18■□□□□ 0.34
NR4A1-220ENST00000564201 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
NR4A1-220ENST00000564201 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
NR4A1-220ENST00000564201 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
NR4A1-220ENST00000564201 NPHP4O75161 1426 aaPredicted RBP17.14■□□□□ 0.33
NR4A1-220ENST00000564201 PLEKHG1Q9ULL1 1385 aa17.14■□□□□ 0.33
NR4A1-220ENST00000564201 MYOM2P54296 1465 aa17.13■□□□□ 0.33
NR4A1-220ENST00000564201 STAC3Q96MF2 364 aa17.13■□□□□ 0.33
NR4A1-220ENST00000564201 SLC26A8Q96RN1 970 aa17.13■□□□□ 0.33
NR4A1-220ENST00000564201 TIMELESSQ9UNS1 1208 aa17.13■□□□□ 0.33
NR4A1-220ENST00000564201 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
NR4A1-220ENST00000564201 IQGAP1P46940 1657 aa17.11■□□□□ 0.33
NR4A1-220ENST00000564201 MED14O60244 1454 aa17.11■□□□□ 0.33
NR4A1-220ENST00000564201 NBPF8Q3BBV2 869 aa17.09■□□□□ 0.33
NR4A1-220ENST00000564201 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
NR4A1-220ENST00000564201 PIK3C2GO75747 1445 aa17.09■□□□□ 0.33
NR4A1-220ENST00000564201 PRAG1Q86YV5 1406 aa17.09■□□□□ 0.33
NR4A1-220ENST00000564201 NRXN1Q9ULB1 1477 aa17.09■□□□□ 0.33
NR4A1-220ENST00000564201 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
NR4A1-220ENST00000564201 SETBP1Q9Y6X0 1596 aa17.07■□□□□ 0.32
NR4A1-220ENST00000564201 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
NR4A1-220ENST00000564201 ALKQ9UM73 1620 aa17.07■□□□□ 0.32
NR4A1-220ENST00000564201 C14orf93Q9H972 538 aaKnown RBP17.06■□□□□ 0.32
NR4A1-220ENST00000564201 TMEM132EQ6IEE7 984 aa17.05■□□□□ 0.32
NR4A1-220ENST00000564201 TBX22Q9Y458 520 aa17.05■□□□□ 0.32
NR4A1-220ENST00000564201 METP08581 1390 aa17.03■□□□□ 0.32
NR4A1-220ENST00000564201 NBPF1Q3BBV0 1214 aa17.03■□□□□ 0.32
NR4A1-220ENST00000564201 DIP2AQ14689 1571 aa17.02■□□□□ 0.31
NR4A1-220ENST00000564201 LAMC1P11047 1609 aa17.01■□□□□ 0.31
NR4A1-220ENST00000564201 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
NR4A1-220ENST00000564201 STK26Q9P289 416 aa17.01■□□□□ 0.31
NR4A1-220ENST00000564201 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
NR4A1-220ENST00000564201 ZEB1P37275 1124 aaPredicted RBP17■□□□□ 0.31
NR4A1-220ENST00000564201 ROCK2O75116 1388 aaKnown RBP17■□□□□ 0.31
NR4A1-220ENST00000564201 KIAA1210Q9ULL0 1709 aa16.99■□□□□ 0.31
NR4A1-220ENST00000564201 ASXL1Q8IXJ9 1541 aa16.98■□□□□ 0.31
NR4A1-220ENST00000564201 AMOTL2Q9Y2J4 779 aa16.98■□□□□ 0.31
NR4A1-220ENST00000564201 ZNF335Q9H4Z2 1342 aaPredicted RBP16.97■□□□□ 0.31
NR4A1-220ENST00000564201 PTPRUQ92729 1446 aa16.97■□□□□ 0.31
NR4A1-220ENST00000564201 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
NR4A1-220ENST00000564201 KCNA6P17658 529 aa16.96■□□□□ 0.31
NR4A1-220ENST00000564201 CARD11Q9BXL7 1154 aa16.96■□□□□ 0.31
NR4A1-220ENST00000564201 TRAK1Q9UPV9 953 aa16.96■□□□□ 0.31
NR4A1-220ENST00000564201 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.3
NR4A1-220ENST00000564201 YTHDC2Q9H6S0 1430 aaKnown RBP16.96■□□□□ 0.3
NR4A1-220ENST00000564201 ADGRB1O14514 1584 aa16.95■□□□□ 0.3
NR4A1-220ENST00000564201 PIK3R4Q99570 1358 aa16.95■□□□□ 0.3
NR4A1-220ENST00000564201 LRPPRCP42704 1394 aaKnown RBP16.93■□□□□ 0.3
NR4A1-220ENST00000564201 STRCP1A6NGW2 1772 aa16.92■□□□□ 0.3
NR4A1-220ENST00000564201 PROSER2Q86WR7 435 aaPredicted RBP16.91■□□□□ 0.3
NR4A1-220ENST00000564201 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
NR4A1-220ENST00000564201 GPRASP1Q5JY77 1395 aa16.9■□□□□ 0.3
NR4A1-220ENST00000564201 ABCC11Q96J66 1382 aa16.9■□□□□ 0.3
NR4A1-220ENST00000564201 XRN1Q8IZH2 1706 aaKnown RBP16.9■□□□□ 0.3
NR4A1-220ENST00000564201 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
NR4A1-220ENST00000564201 SAFB2Q14151 953 aaKnown RBP eCLIP16.9■□□□□ 0.3
NR4A1-220ENST00000564201 ROBO2Q9HCK4 1378 aa16.89■□□□□ 0.3
NR4A1-220ENST00000564201 NWD1Q149M9 1564 aa16.89■□□□□ 0.3
NR4A1-220ENST00000564201 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
NR4A1-220ENST00000564201 POGKQ9P215 609 aa16.89■□□□□ 0.29
NR4A1-220ENST00000564201 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
NR4A1-220ENST00000564201 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
NR4A1-220ENST00000564201 PLEKHH1Q9ULM0 1364 aa16.87■□□□□ 0.29
NR4A1-220ENST00000564201 TECPR2O15040 1411 aa16.87■□□□□ 0.29
NR4A1-220ENST00000564201 C14orf37Q86TY3 774 aa16.86■□□□□ 0.29
NR4A1-220ENST00000564201 ARHGEF28Q8N1W1 1705 aaKnown RBP16.86■□□□□ 0.29
NR4A1-220ENST00000564201 NKTRP30414 1462 aaKnown RBP16.86■□□□□ 0.29
NR4A1-220ENST00000564201 CPS1P31327 1500 aa16.86■□□□□ 0.29
NR4A1-220ENST00000564201 USP47Q96K76 1375 aa16.85■□□□□ 0.29
NR4A1-220ENST00000564201 PTCH1Q13635 1447 aa16.85■□□□□ 0.29
NR4A1-220ENST00000564201 DLC1Q96QB1 1528 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms