RNA–Protein interactions for RNA: ENST00000564011.5

LCMT1-204, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 1,168 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-204ENST00000564011 MEX3CQ5U5Q3 659 aaKnown RBP16.27■□□□□ 0.2
LCMT1-204ENST00000564011 SLAIN2Q9P270 581 aa16.27■□□□□ 0.2
LCMT1-204ENST00000564011 ADGRB3O60242 1522 aa16.27■□□□□ 0.2
LCMT1-204ENST00000564011 ZNF772Q68DY9 489 aaPredicted RBP16.26■□□□□ 0.19
LCMT1-204ENST00000564011 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
LCMT1-204ENST00000564011 SPATA31A6Q5VVP1 1343 aa16.25■□□□□ 0.19
LCMT1-204ENST00000564011 RPRD2Q5VT52 1461 aaKnown RBP16.25■□□□□ 0.19
LCMT1-204ENST00000564011 NCOA3Q9Y6Q9 1424 aa16.25■□□□□ 0.19
LCMT1-204ENST00000564011 NWD1Q149M9 1564 aa16.25■□□□□ 0.19
LCMT1-204ENST00000564011 PHLPP1O60346 1717 aa16.25■□□□□ 0.19
LCMT1-204ENST00000564011 TET3O43151 1660 aa16.24■□□□□ 0.19
LCMT1-204ENST00000564011 NOS1P29475 1434 aa16.22■□□□□ 0.19
LCMT1-204ENST00000564011 CADPS2Q86UW7 1296 aa16.22■□□□□ 0.19
LCMT1-204ENST00000564011 PLEKHG1Q9ULL1 1385 aa16.22■□□□□ 0.19
LCMT1-204ENST00000564011 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.19
LCMT1-204ENST00000564011 ATF3P18847 181 aa16.21■□□□□ 0.19
LCMT1-204ENST00000564011 CHIC2Q9UKJ5 165 aa16.21■□□□□ 0.19
LCMT1-204ENST00000564011 RBM33Q96EV2 1170 aaKnown RBP16.2■□□□□ 0.18
LCMT1-204ENST00000564011 TBX22Q9Y458 520 aa16.19■□□□□ 0.18
LCMT1-204ENST00000564011 PIK3R4Q99570 1358 aa16.17■□□□□ 0.18
LCMT1-204ENST00000564011 LRP6O75581 1613 aa16.17■□□□□ 0.18
LCMT1-204ENST00000564011 CHGAP10645 457 aaKnown RBP16.17■□□□□ 0.18
LCMT1-204ENST00000564011 UPF1Q92900 1129 aaKnown RBP eCLIP16.17■□□□□ 0.18
LCMT1-204ENST00000564011 C19orf44Q9H6X5 657 aa16.17■□□□□ 0.18
LCMT1-204ENST00000564011 RIMS2Q9UQ26 1411 aa16.17■□□□□ 0.18
LCMT1-204ENST00000564011 DIP2AQ14689 1571 aa16.16■□□□□ 0.18
LCMT1-204ENST00000564011 CHD2O14647 1828 aaKnown RBP16.15■□□□□ 0.18
LCMT1-204ENST00000564011 FOXD1Q16676 465 aa16.15■□□□□ 0.18
LCMT1-204ENST00000564011 ANKRD50Q9ULJ7 1429 aa16.15■□□□□ 0.18
LCMT1-204ENST00000564011 ADGRL2O95490 1459 aa16.14■□□□□ 0.17
LCMT1-204ENST00000564011 ZFYVE9O95405 1425 aa16.13■□□□□ 0.17
LCMT1-204ENST00000564011 RXRBP28702 533 aa16.13■□□□□ 0.17
LCMT1-204ENST00000564011 FAM50AQ14320 339 aaKnown RBP16.13■□□□□ 0.17
LCMT1-204ENST00000564011 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
LCMT1-204ENST00000564011 GCC2Q8IWJ2 1684 aa16.11■□□□□ 0.17
LCMT1-204ENST00000564011 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
LCMT1-204ENST00000564011 TRPM2O94759 1503 aa16.1■□□□□ 0.17
LCMT1-204ENST00000564011 AHDC1Q5TGY3 1603 aaPredicted RBP16.1■□□□□ 0.17
LCMT1-204ENST00000564011 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
LCMT1-204ENST00000564011 SHPRHQ149N8 1683 aa16.1■□□□□ 0.17
LCMT1-204ENST00000564011 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.17
LCMT1-204ENST00000564011 DCCP43146 1447 aa16.08■□□□□ 0.16
LCMT1-204ENST00000564011 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.16
LCMT1-204ENST00000564011 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.06■□□□□ 0.16
LCMT1-204ENST00000564011 LRRC59Q96AG4 307 aaKnown RBP16.06■□□□□ 0.16
LCMT1-204ENST00000564011 AMOTL2Q9Y2J4 779 aa16.06■□□□□ 0.16
LCMT1-204ENST00000564011 NUTM2BA6NNL0 878 aaPredicted RBP16.05■□□□□ 0.16
LCMT1-204ENST00000564011 NUTM2EB1AL46 878 aaPredicted RBP16.05■□□□□ 0.16
LCMT1-204ENST00000564011 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
LCMT1-204ENST00000564011 MYO5BQ9ULV0 1848 aa16.05■□□□□ 0.16
LCMT1-204ENST00000564011 NGLY1Q96IV0 654 aa16.03■□□□□ 0.16
LCMT1-204ENST00000564011 UNC13BO14795 1591 aa16.03■□□□□ 0.16
LCMT1-204ENST00000564011 ADAMTS13Q76LX8 1427 aa16.02■□□□□ 0.16
LCMT1-204ENST00000564011 BRINP3Q76B58 766 aa16.02■□□□□ 0.16
LCMT1-204ENST00000564011 NUTM2DQ5VT03 806 aaPredicted RBP16.01■□□□□ 0.15
LCMT1-204ENST00000564011 AFF2P51816 1311 aa16■□□□□ 0.15
LCMT1-204ENST00000564011 RBM6P78332 1123 aaKnown RBP16■□□□□ 0.15
LCMT1-204ENST00000564011 ZNF326Q5BKZ1 582 aaKnown RBP16■□□□□ 0.15
LCMT1-204ENST00000564011 SETD5Q9C0A6 1442 aa16■□□□□ 0.15
LCMT1-204ENST00000564011 ROCK1Q13464 1354 aa16■□□□□ 0.15
LCMT1-204ENST00000564011 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
LCMT1-204ENST00000564011 IQGAP3Q86VI3 1631 aa15.98■□□□□ 0.15
LCMT1-204ENST00000564011 C8orf37Q96NL8 207 aa15.98■□□□□ 0.15
LCMT1-204ENST00000564011 E9PCH4 1651 aa15.98■□□□□ 0.15
LCMT1-204ENST00000564011 NUP155O75694 1391 aa15.98■□□□□ 0.15
LCMT1-204ENST00000564011 QTRT2Q9H974 415 aaKnown RBP15.96■□□□□ 0.15
LCMT1-204ENST00000564011 RGS12O14924 1447 aa15.95■□□□□ 0.14
LCMT1-204ENST00000564011 NHSL1Q5SYE7 1610 aa15.94■□□□□ 0.14
LCMT1-204ENST00000564011 EP400Q96L91 3159 aa15.94■□□□□ 0.14
LCMT1-204ENST00000564011 ATAD2Q6PL18 1390 aa15.94■□□□□ 0.14
LCMT1-204ENST00000564011 SETBP1Q9Y6X0 1596 aa15.94■□□□□ 0.14
LCMT1-204ENST00000564011 MST1RQ04912 1400 aa15.94■□□□□ 0.14
LCMT1-204ENST00000564011 ADGRL3Q9HAR2 1447 aa15.93■□□□□ 0.14
LCMT1-204ENST00000564011 XRN1Q8IZH2 1706 aaKnown RBP15.91■□□□□ 0.14
LCMT1-204ENST00000564011 TRPC5Q9UL62 973 aaPredicted RBP15.91■□□□□ 0.14
LCMT1-204ENST00000564011 PTPRUQ92729 1446 aa15.9■□□□□ 0.14
LCMT1-204ENST00000564011 PNPLA6Q8IY17 1366 aa15.89■□□□□ 0.13
LCMT1-204ENST00000564011 ZRANB1Q9UGI0 708 aa15.89■□□□□ 0.13
LCMT1-204ENST00000564011 USP21Q9UK80 565 aa15.89■□□□□ 0.13
LCMT1-204ENST00000564011 SPHKAPQ2M3C7 1700 aa15.88■□□□□ 0.13
LCMT1-204ENST00000564011 VGFO15240 615 aaPredicted RBP15.88■□□□□ 0.13
LCMT1-204ENST00000564011 ADAMTS2O95450 1211 aa15.88■□□□□ 0.13
LCMT1-204ENST00000564011 CCDC125Q86Z20 511 aa15.88■□□□□ 0.13
LCMT1-204ENST00000564011 PTCH1Q13635 1447 aa15.87■□□□□ 0.13
LCMT1-204ENST00000564011 ITGAEP38570 1179 aa15.86■□□□□ 0.13
LCMT1-204ENST00000564011 METP08581 1390 aa15.85■□□□□ 0.13
LCMT1-204ENST00000564011 NRXN3Q9Y4C0 1643 aa15.84■□□□□ 0.13
LCMT1-204ENST00000564011 LRPPRCP42704 1394 aaKnown RBP15.84■□□□□ 0.13
LCMT1-204ENST00000564011 C1orf167Q5SNV9 1468 aa15.84■□□□□ 0.13
LCMT1-204ENST00000564011 KIF1BO60333 1816 aa15.82■□□□□ 0.12
LCMT1-204ENST00000564011 SOS2Q07890 1332 aaPredicted RBP15.82■□□□□ 0.12
LCMT1-204ENST00000564011 NPHP3Q7Z494 1330 aa15.82■□□□□ 0.12
LCMT1-204ENST00000564011 NALCNQ8IZF0 1738 aa15.82■□□□□ 0.12
LCMT1-204ENST00000564011 HFM1A2PYH4 1435 aa15.81■□□□□ 0.12
LCMT1-204ENST00000564011 RPGRIP1LQ68CZ1 1315 aa15.81■□□□□ 0.12
LCMT1-204ENST00000564011 LAMC1P11047 1609 aa15.8■□□□□ 0.12
LCMT1-204ENST00000564011 FNBP4Q8N3X1 1017 aaPredicted RBP15.8■□□□□ 0.12
LCMT1-204ENST00000564011 DDX17Q92841 729 aaKnown RBP15.8■□□□□ 0.12
LCMT1-204ENST00000564011 NEXMIFQ5QGS0 1516 aa15.79■□□□□ 0.12
LCMT1-204ENST00000564011 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms