RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 U2AF1Q01081 240 aaKnown RBP eCLIP7.27□□□□□ -1.25
TCF4-218ENST00000563686 SAFB2Q14151 953 aaKnown RBP eCLIP7.27□□□□□ -1.25
TCF4-218ENST00000563686 NBPF1Q3BBV0 1214 aa7.27□□□□□ -1.25
TCF4-218ENST00000563686 PRAG1Q86YV5 1406 aa7.27□□□□□ -1.25
TCF4-218ENST00000563686 TERF2IPQ9NYB0 399 aa7.26□□□□□ -1.25
TCF4-218ENST00000563686 RUNDC1Q96C34 613 aa7.26□□□□□ -1.25
TCF4-218ENST00000563686 TRAK1Q9UPV9 953 aa7.26□□□□□ -1.25
TCF4-218ENST00000563686 HDGFP51858 240 aaKnown RBP7.26□□□□□ -1.25
TCF4-218ENST00000563686 POLR1AO95602 1720 aaPredicted RBP7.26□□□□□ -1.25
TCF4-218ENST00000563686 DNAJC5BQ9UF47 199 aa7.26□□□□□ -1.25
TCF4-218ENST00000563686 ADAMTS8Q9UP79 889 aa7.26□□□□□ -1.25
TCF4-218ENST00000563686 SMC4Q9NTJ3 1288 aa7.25□□□□□ -1.25
TCF4-218ENST00000563686 DISP3Q9P2K9 1392 aa7.25□□□□□ -1.25
TCF4-218ENST00000563686 MYO5CQ9NQX4 1742 aa7.25□□□□□ -1.25
TCF4-218ENST00000563686 SCAF11Q99590 1463 aaKnown RBP7.25□□□□□ -1.25
TCF4-218ENST00000563686 ABCA8O94911 1581 aa7.25□□□□□ -1.25
TCF4-218ENST00000563686 NUTM2DQ5VT03 806 aaPredicted RBP7.25□□□□□ -1.25
TCF4-218ENST00000563686 PREX2Q70Z35 1606 aa7.25□□□□□ -1.25
TCF4-218ENST00000563686 KDM5DQ9BY66 1539 aa7.24□□□□□ -1.25
TCF4-218ENST00000563686 AAMPQ13685 434 aa7.24□□□□□ -1.25
TCF4-218ENST00000563686 TRIM44Q96DX7 344 aaPredicted RBP7.24□□□□□ -1.25
TCF4-218ENST00000563686 RTN4Q9NQC3 1192 aaKnown RBP7.24□□□□□ -1.25
TCF4-218ENST00000563686 RRP7AQ9Y3A4 280 aaKnown RBP7.24□□□□□ -1.25
TCF4-218ENST00000563686 MSH5O43196 834 aa7.24□□□□□ -1.25
TCF4-218ENST00000563686 PLPPR3Q6T4P5 718 aa7.24□□□□□ -1.25
TCF4-218ENST00000563686 SPRYD3Q8NCJ5 442 aa7.24□□□□□ -1.25
TCF4-218ENST00000563686 CDCA7LQ96GN5 454 aa7.24□□□□□ -1.25
TCF4-218ENST00000563686 DHX29Q7Z478 1369 aaKnown RBP7.24□□□□□ -1.25
TCF4-218ENST00000563686 APAF1O14727 1248 aa7.23□□□□□ -1.25
TCF4-218ENST00000563686 VGFO15240 615 aaPredicted RBP7.23□□□□□ -1.25
TCF4-218ENST00000563686 ASXL1Q8IXJ9 1541 aa7.23□□□□□ -1.25
TCF4-218ENST00000563686 NCLP19338 710 aaKnown RBP7.23□□□□□ -1.25
TCF4-218ENST00000563686 SAMD9LQ8IVG5 1584 aa7.23□□□□□ -1.25
TCF4-218ENST00000563686 MFAP1P55081 439 aaKnown RBP7.22□□□□□ -1.25
TCF4-218ENST00000563686 GLIPR1L2Q4G1C9 344 aa7.22□□□□□ -1.25
TCF4-218ENST00000563686 ZKSCAN2Q63HK3 967 aa7.22□□□□□ -1.25
TCF4-218ENST00000563686 MBD5Q9P267 1494 aa7.22□□□□□ -1.25
TCF4-218ENST00000563686 SHROOM2Q13796 1616 aa7.22□□□□□ -1.25
TCF4-218ENST00000563686 ABCC2Q92887 1545 aa7.22□□□□□ -1.25
TCF4-218ENST00000563686 CDC42BPAQ5VT25 1732 aa7.22□□□□□ -1.25
TCF4-218ENST00000563686 COL17A1Q9UMD9 1497 aaPredicted RBP7.22□□□□□ -1.25
TCF4-218ENST00000563686 PLCH2O75038 1416 aa7.22□□□□□ -1.25
TCF4-218ENST00000563686 PARD3Q8TEW0 1356 aa7.22□□□□□ -1.25
TCF4-218ENST00000563686 ZMYM4Q5VZL5 1548 aa7.22□□□□□ -1.25
TCF4-218ENST00000563686 LMOD3Q0VAK6 560 aa7.21□□□□□ -1.25
TCF4-218ENST00000563686 KDM5AP29375 1690 aaKnown RBP7.21□□□□□ -1.25
TCF4-218ENST00000563686 ADGRL1O94910 1474 aa7.21□□□□□ -1.25
TCF4-218ENST00000563686 NKTRP30414 1462 aaKnown RBP7.21□□□□□ -1.26
TCF4-218ENST00000563686 ABCC10Q5T3U5 1492 aa7.21□□□□□ -1.26
TCF4-218ENST00000563686 GSE1Q14687 1217 aa7.21□□□□□ -1.26
TCF4-218ENST00000563686 ZBTB7CA1YPR0 619 aa7.21□□□□□ -1.26
TCF4-218ENST00000563686 COG6Q9Y2V7 657 aa7.2□□□□□ -1.26
TCF4-218ENST00000563686 GBP4Q96PP9 640 aa7.2□□□□□ -1.26
TCF4-218ENST00000563686 RPGRIP1LQ68CZ1 1315 aa7.2□□□□□ -1.26
TCF4-218ENST00000563686 HAP1P54257 671 aaPredicted RBP7.2□□□□□ -1.26
TCF4-218ENST00000563686 MCCP23508 829 aa7.2□□□□□ -1.26
TCF4-218ENST00000563686 CLUAP1Q96AJ1 413 aa7.2□□□□□ -1.26
TCF4-218ENST00000563686 BACH2Q9BYV9 841 aa7.2□□□□□ -1.26
TCF4-218ENST00000563686 SLC4A3P48751 1232 aa7.19□□□□□ -1.26
TCF4-218ENST00000563686 C14orf37Q86TY3 774 aa7.19□□□□□ -1.26
TCF4-218ENST00000563686 CFAP74Q9C0B2 1584 aa7.19□□□□□ -1.26
TCF4-218ENST00000563686 NSD3Q9BZ95 1437 aa7.19□□□□□ -1.26
TCF4-218ENST00000563686 A2MP01023 1474 aa7.19□□□□□ -1.26
TCF4-218ENST00000563686 GOLGA6L3A6NEY3 463 aa7.19□□□□□ -1.26
TCF4-218ENST00000563686 FANCAO15360 1455 aa7.19□□□□□ -1.26
TCF4-218ENST00000563686 SLFN5Q08AF3 891 aa7.19□□□□□ -1.26
TCF4-218ENST00000563686 SLKQ9H2G2 1235 aaPredicted RBP7.19□□□□□ -1.26
TCF4-218ENST00000563686 DDX19BQ9UMR2 479 aa7.19□□□□□ -1.26
TCF4-218ENST00000563686 SPATA31E1Q6ZUB1 1445 aa7.19□□□□□ -1.26
TCF4-218ENST00000563686 AFAP1Q8N556 730 aa7.18□□□□□ -1.26
TCF4-218ENST00000563686 RTF1Q92541 710 aaKnown RBP7.18□□□□□ -1.26
TCF4-218ENST00000563686 TRPM1Q7Z4N2 1603 aa7.18□□□□□ -1.26
TCF4-218ENST00000563686 DDX11L8A8MPP1 907 aa7.18□□□□□ -1.26
TCF4-218ENST00000563686 CFAP70Q5T0N1 1121 aa7.18□□□□□ -1.26
TCF4-218ENST00000563686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.18□□□□□ -1.26
TCF4-218ENST00000563686 DZIP1LQ8IYY4 767 aaKnown RBP7.18□□□□□ -1.26
TCF4-218ENST00000563686 BLMP54132 1417 aaPredicted RBP7.18□□□□□ -1.26
TCF4-218ENST00000563686 SYNMO15061 1565 aa7.18□□□□□ -1.26
TCF4-218ENST00000563686 CHD1O14646 1710 aa7.18□□□□□ -1.26
TCF4-218ENST00000563686 DIAPH1O60610 1272 aaKnown RBP7.18□□□□□ -1.26
TCF4-218ENST00000563686 UNC13BO14795 1591 aa7.18□□□□□ -1.26
TCF4-218ENST00000563686 IQGAP3Q86VI3 1631 aa7.18□□□□□ -1.26
TCF4-218ENST00000563686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.18□□□□□ -1.26
TCF4-218ENST00000563686 KDM5BQ9UGL1 1544 aa7.18□□□□□ -1.26
TCF4-218ENST00000563686 PANK1Q8TE04 598 aa7.18□□□□□ -1.26
TCF4-218ENST00000563686 NAP1L5Q96NT1 182 aaPredicted RBP7.18□□□□□ -1.26
TCF4-218ENST00000563686 TTC37Q6PGP7 1564 aa7.17□□□□□ -1.26
TCF4-218ENST00000563686 WDR63Q8IWG1 891 aa7.17□□□□□ -1.26
TCF4-218ENST00000563686 PLXNC1O60486 1568 aa7.17□□□□□ -1.26
TCF4-218ENST00000563686 MLECQ14165 292 aa7.17□□□□□ -1.26
TCF4-218ENST00000563686 CABP2Q9NPB3 220 aa7.17□□□□□ -1.26
TCF4-218ENST00000563686 PRDM15P57071 1507 aaPredicted RBP7.17□□□□□ -1.26
TCF4-218ENST00000563686 WDR7Q9Y4E6 1490 aa7.17□□□□□ -1.26
TCF4-218ENST00000563686 PAK3O75914 559 aaPredicted RBP7.17□□□□□ -1.26
TCF4-218ENST00000563686 RTEL1-TNFRSF6BF6WH68 1400 aa7.17□□□□□ -1.26
TCF4-218ENST00000563686 ZCCHC11Q5TAX3 1644 aaKnown RBP7.17□□□□□ -1.26
TCF4-218ENST00000563686 PDE3AQ14432 1141 aa7.17□□□□□ -1.26
TCF4-218ENST00000563686 INSRP06213 1382 aa7.17□□□□□ -1.26
TCF4-218ENST00000563686 MINK1Q8N4C8 1332 aaPredicted RBP7.16□□□□□ -1.26
TCF4-218ENST00000563686 BCL2L13Q9BXK5 485 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms