RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 CCDC144AA2RUR9 1427 aa21.76■■□□□ 1.07
SCAMP2-203ENST00000563663 STAG3Q9UJ98 1225 aa21.74■■□□□ 1.07
SCAMP2-203ENST00000563663 IFT172Q9UG01 1749 aa21.74■■□□□ 1.07
SCAMP2-203ENST00000563663 PPLO60437 1756 aa21.73■■□□□ 1.07
SCAMP2-203ENST00000563663 TXNDC2Q86VQ3 553 aa21.73■■□□□ 1.07
SCAMP2-203ENST00000563663 DMRT2Q9Y5R5 561 aa21.72■■□□□ 1.07
SCAMP2-203ENST00000563663 LTBP4Q8N2S1 1624 aa21.72■■□□□ 1.07
SCAMP2-203ENST00000563663 NRXN3Q9Y4C0 1643 aa21.72■■□□□ 1.07
SCAMP2-203ENST00000563663 STRCP1A6NGW2 1772 aa21.7■■□□□ 1.06
SCAMP2-203ENST00000563663 DHX57Q6P158 1386 aaKnown RBP21.7■■□□□ 1.06
SCAMP2-203ENST00000563663 CHGAP10645 457 aaKnown RBP21.69■■□□□ 1.06
SCAMP2-203ENST00000563663 PLEKHG1Q9ULL1 1385 aa21.69■■□□□ 1.06
SCAMP2-203ENST00000563663 SETBP1Q9Y6X0 1596 aa21.67■■□□□ 1.06
SCAMP2-203ENST00000563663 ADAMTS13Q76LX8 1427 aa21.67■■□□□ 1.06
SCAMP2-203ENST00000563663 EID1Q9Y6B2 187 aa21.66■■□□□ 1.06
SCAMP2-203ENST00000563663 SETD1AO15047 1707 aaKnown RBP21.65■■□□□ 1.06
SCAMP2-203ENST00000563663 NUTM2DQ5VT03 806 aaPredicted RBP21.64■■□□□ 1.05
SCAMP2-203ENST00000563663 ZNF335Q9H4Z2 1342 aaPredicted RBP21.63■■□□□ 1.05
SCAMP2-203ENST00000563663 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.61■■□□□ 1.05
SCAMP2-203ENST00000563663 DIP2AQ14689 1571 aa21.61■■□□□ 1.05
SCAMP2-203ENST00000563663 NWD1Q149M9 1564 aa21.6■■□□□ 1.05
SCAMP2-203ENST00000563663 RPGRIP1LQ68CZ1 1315 aa21.6■■□□□ 1.05
SCAMP2-203ENST00000563663 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
SCAMP2-203ENST00000563663 CHD2O14647 1828 aaKnown RBP21.58■■□□□ 1.05
SCAMP2-203ENST00000563663 NRXN1Q9ULB1 1477 aa21.58■■□□□ 1.05
SCAMP2-203ENST00000563663 SLC26A8Q96RN1 970 aa21.57■■□□□ 1.04
SCAMP2-203ENST00000563663 MYOM2P54296 1465 aa21.56■■□□□ 1.04
SCAMP2-203ENST00000563663 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
SCAMP2-203ENST00000563663 PPP1R15AO75807 674 aaPredicted RBP21.56■■□□□ 1.04
SCAMP2-203ENST00000563663 RGL3Q3MIN7 710 aa21.56■■□□□ 1.04
SCAMP2-203ENST00000563663 XIRP1Q702N8 1843 aaKnown RBP21.54■■□□□ 1.04
SCAMP2-203ENST00000563663 PIK3C2GO75747 1445 aa21.54■■□□□ 1.04
SCAMP2-203ENST00000563663 SENP3Q9H4L4 574 aaPredicted RBP21.54■■□□□ 1.04
SCAMP2-203ENST00000563663 CPS1P31327 1500 aa21.54■■□□□ 1.04
SCAMP2-203ENST00000563663 ADGRF5Q8IZF2 1346 aa21.54■■□□□ 1.04
SCAMP2-203ENST00000563663 ALKQ9UM73 1620 aa21.54■■□□□ 1.04
SCAMP2-203ENST00000563663 XRN1Q8IZH2 1706 aaKnown RBP21.53■■□□□ 1.04
SCAMP2-203ENST00000563663 TBX22Q9Y458 520 aa21.53■■□□□ 1.04
SCAMP2-203ENST00000563663 PTPRUQ92729 1446 aa21.52■■□□□ 1.04
SCAMP2-203ENST00000563663 ASXL1Q8IXJ9 1541 aa21.51■■□□□ 1.03
SCAMP2-203ENST00000563663 VGFO15240 615 aaPredicted RBP21.51■■□□□ 1.03
SCAMP2-203ENST00000563663 METP08581 1390 aa21.5■■□□□ 1.03
SCAMP2-203ENST00000563663 LRRC7Q96NW7 1537 aa21.5■■□□□ 1.03
SCAMP2-203ENST00000563663 PIK3R4Q99570 1358 aa21.49■■□□□ 1.03
SCAMP2-203ENST00000563663 SIN3AQ96ST3 1273 aa21.48■■□□□ 1.03
SCAMP2-203ENST00000563663 NKTRP30414 1462 aaKnown RBP21.48■■□□□ 1.03
SCAMP2-203ENST00000563663 IQSEC2Q5JU85 1478 aa21.48■■□□□ 1.03
SCAMP2-203ENST00000563663 CERKQ8TCT0 537 aa21.47■■□□□ 1.03
SCAMP2-203ENST00000563663 KCNA6P17658 529 aa21.46■■□□□ 1.03
SCAMP2-203ENST00000563663 PRAG1Q86YV5 1406 aa21.45■■□□□ 1.02
SCAMP2-203ENST00000563663 LAMC1P11047 1609 aa21.44■■□□□ 1.02
SCAMP2-203ENST00000563663 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
SCAMP2-203ENST00000563663 BCANQ96GW7 911 aa21.43■■□□□ 1.02
SCAMP2-203ENST00000563663 ADGRB1O14514 1584 aa21.41■■□□□ 1.02
SCAMP2-203ENST00000563663 DCAF11Q8TEB1 546 aa21.39■■□□□ 1.01
SCAMP2-203ENST00000563663 KNDC1Q76NI1 1749 aa21.39■■□□□ 1.01
SCAMP2-203ENST00000563663 C14orf93Q9H972 538 aaKnown RBP21.38■■□□□ 1.01
SCAMP2-203ENST00000563663 L3MBTL2Q969R5 705 aa21.37■■□□□ 1.01
SCAMP2-203ENST00000563663 TMEM94Q12767 1356 aa21.37■■□□□ 1.01
SCAMP2-203ENST00000563663 KIAA1210Q9ULL0 1709 aa21.36■■□□□ 1.01
SCAMP2-203ENST00000563663 TECPR2O15040 1411 aa21.36■■□□□ 1.01
SCAMP2-203ENST00000563663 PTCH1Q13635 1447 aa21.36■■□□□ 1.01
SCAMP2-203ENST00000563663 STAC3Q96MF2 364 aa21.36■■□□□ 1.01
SCAMP2-203ENST00000563663 AMOTL2Q9Y2J4 779 aa21.36■■□□□ 1.01
SCAMP2-203ENST00000563663 CFAP70Q5T0N1 1121 aa21.35■■□□□ 1.01
SCAMP2-203ENST00000563663 NEUROD1Q13562 356 aa21.34■■□□□ 1.01
SCAMP2-203ENST00000563663 ROBO2Q9HCK4 1378 aa21.33■■□□□ 1.01
SCAMP2-203ENST00000563663 KDM2AQ9Y2K7 1162 aa21.33■■□□□ 1.01
SCAMP2-203ENST00000563663 RBM33Q96EV2 1170 aaKnown RBP21.33■■□□□ 1
SCAMP2-203ENST00000563663 NALCNQ8IZF0 1738 aa21.32■■□□□ 1
SCAMP2-203ENST00000563663 LRPPRCP42704 1394 aaKnown RBP21.32■■□□□ 1
SCAMP2-203ENST00000563663 YTHDC2Q9H6S0 1430 aaKnown RBP21.31■■□□□ 1
SCAMP2-203ENST00000563663 CLSPNQ9HAW4 1339 aa21.31■■□□□ 1
SCAMP2-203ENST00000563663 NCOA3Q9Y6Q9 1424 aa21.31■■□□□ 1
SCAMP2-203ENST00000563663 TMEM132EQ6IEE7 984 aa21.31■■□□□ 1
SCAMP2-203ENST00000563663 TRPM1Q7Z4N2 1603 aa21.3■■□□□ 1
SCAMP2-203ENST00000563663 ABCC11Q96J66 1382 aa21.29■■□□□ 1
SCAMP2-203ENST00000563663 PROSER2Q86WR7 435 aaPredicted RBP21.29■■□□□ 1
SCAMP2-203ENST00000563663 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.29■■□□□ 1
SCAMP2-203ENST00000563663 DLC1Q96QB1 1528 aa21.27■□□□□ 0.99
SCAMP2-203ENST00000563663 FBXO41Q8TF61 875 aa21.25■□□□□ 0.99
SCAMP2-203ENST00000563663 ARHGEF28Q8N1W1 1705 aaKnown RBP21.25■□□□□ 0.99
SCAMP2-203ENST00000563663 ADGRL3Q9HAR2 1447 aa21.24■□□□□ 0.99
SCAMP2-203ENST00000563663 PLEKHH1Q9ULM0 1364 aa21.23■□□□□ 0.99
SCAMP2-203ENST00000563663 NBPF8Q3BBV2 869 aa21.23■□□□□ 0.99
SCAMP2-203ENST00000563663 FAM135BQ49AJ0 1406 aa21.23■□□□□ 0.99
SCAMP2-203ENST00000563663 TONSLQ96HA7 1378 aa21.22■□□□□ 0.99
SCAMP2-203ENST00000563663 NBPF1Q3BBV0 1214 aa21.22■□□□□ 0.99
SCAMP2-203ENST00000563663 DCCP43146 1447 aa21.21■□□□□ 0.99
SCAMP2-203ENST00000563663 STK26Q9P289 416 aa21.2■□□□□ 0.98
SCAMP2-203ENST00000563663 MSH6P52701 1360 aa21.19■□□□□ 0.98
SCAMP2-203ENST00000563663 SIRT1Q96EB6 747 aa21.19■□□□□ 0.98
SCAMP2-203ENST00000563663 CDC42BPGQ6DT37 1551 aa21.18■□□□□ 0.98
SCAMP2-203ENST00000563663 UBAP1LF5GYI3 381 aa21.18■□□□□ 0.98
SCAMP2-203ENST00000563663 ILDR1Q86SU0 546 aaPredicted RBP21.18■□□□□ 0.98
SCAMP2-203ENST00000563663 WAPLQ7Z5K2 1190 aa21.18■□□□□ 0.98
SCAMP2-203ENST00000563663 GPRASP1Q5JY77 1395 aa21.17■□□□□ 0.98
SCAMP2-203ENST00000563663 RALGAPBQ86X10 1494 aa21.17■□□□□ 0.98
SCAMP2-203ENST00000563663 C19orf44Q9H6X5 657 aa21.17■□□□□ 0.98
SCAMP2-203ENST00000563663 ADGRB2O60241 1585 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms