RNA–Protein interactions for RNA: ENST00000563589.1

POLR2C-205, Transcript of RNA polymerase II subunit C, humanhuman

TSL 4

Gene POLR2C, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-205ENST00000563589 ANKRD50Q9ULJ7 1429 aa11.93□□□□□ -0.5
POLR2C-205ENST00000563589 IQGAP3Q86VI3 1631 aa11.91□□□□□ -0.5
POLR2C-205ENST00000563589 E9PCH4 1651 aa11.91□□□□□ -0.5
POLR2C-205ENST00000563589 TMEM131LA2VDJ0 1609 aa11.9□□□□□ -0.5
POLR2C-205ENST00000563589 FAM50AQ14320 339 aaKnown RBP11.9□□□□□ -0.5
POLR2C-205ENST00000563589 TMEM94Q12767 1356 aa11.9□□□□□ -0.5
POLR2C-205ENST00000563589 DIP2AQ14689 1571 aa11.89□□□□□ -0.51
POLR2C-205ENST00000563589 CHD2O14647 1828 aaKnown RBP11.89□□□□□ -0.51
POLR2C-205ENST00000563589 IDI1Q13907 227 aa11.89□□□□□ -0.51
POLR2C-205ENST00000563589 PHLPP1O60346 1717 aa11.89□□□□□ -0.51
POLR2C-205ENST00000563589 ZFYVE9O95405 1425 aa11.88□□□□□ -0.51
POLR2C-205ENST00000563589 FAM135BQ49AJ0 1406 aa11.87□□□□□ -0.51
POLR2C-205ENST00000563589 SLC52A1Q9NWF4 448 aa11.87□□□□□ -0.51
POLR2C-205ENST00000563589 MSH6P52701 1360 aa11.87□□□□□ -0.51
POLR2C-205ENST00000563589 PLEKHG1Q9ULL1 1385 aa11.87□□□□□ -0.51
POLR2C-205ENST00000563589 RIMS2Q9UQ26 1411 aa11.86□□□□□ -0.51
POLR2C-205ENST00000563589 PPP1R15AO75807 674 aaPredicted RBP11.86□□□□□ -0.51
POLR2C-205ENST00000563589 KCNA6P17658 529 aa11.86□□□□□ -0.51
POLR2C-205ENST00000563589 SLC26A8Q96RN1 970 aa11.86□□□□□ -0.51
POLR2C-205ENST00000563589 BCANQ96GW7 911 aa11.85□□□□□ -0.51
POLR2C-205ENST00000563589 SPHKAPQ2M3C7 1700 aa11.85□□□□□ -0.51
POLR2C-205ENST00000563589 ROCK1Q13464 1354 aa11.84□□□□□ -0.51
POLR2C-205ENST00000563589 PROSER2Q86WR7 435 aaPredicted RBP11.84□□□□□ -0.51
POLR2C-205ENST00000563589 TRPM2O94759 1503 aa11.83□□□□□ -0.52
POLR2C-205ENST00000563589 COL16A1Q07092 1604 aaPredicted RBP11.82□□□□□ -0.52
POLR2C-205ENST00000563589 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.8□□□□□ -0.52
POLR2C-205ENST00000563589 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
POLR2C-205ENST00000563589 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
POLR2C-205ENST00000563589 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
POLR2C-205ENST00000563589 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
POLR2C-205ENST00000563589 AHDC1Q5TGY3 1603 aaPredicted RBP11.79□□□□□ -0.52
POLR2C-205ENST00000563589 NCOA3Q9Y6Q9 1424 aa11.79□□□□□ -0.52
POLR2C-205ENST00000563589 SHPRHQ149N8 1683 aa11.79□□□□□ -0.52
POLR2C-205ENST00000563589 SETD1AO15047 1707 aaKnown RBP11.79□□□□□ -0.52
POLR2C-205ENST00000563589 XRN1Q8IZH2 1706 aaKnown RBP11.79□□□□□ -0.52
POLR2C-205ENST00000563589 PIK3R4Q99570 1358 aa11.79□□□□□ -0.52
POLR2C-205ENST00000563589 ADAMTS13Q76LX8 1427 aa11.78□□□□□ -0.52
POLR2C-205ENST00000563589 SETBP1Q9Y6X0 1596 aa11.78□□□□□ -0.52
POLR2C-205ENST00000563589 NRXN3Q9Y4C0 1643 aa11.78□□□□□ -0.52
POLR2C-205ENST00000563589 NUP155O75694 1391 aa11.77□□□□□ -0.53
POLR2C-205ENST00000563589 JCADQ9P266 1359 aa11.77□□□□□ -0.53
POLR2C-205ENST00000563589 C14orf37Q86TY3 774 aa11.76□□□□□ -0.53
POLR2C-205ENST00000563589 CLTCL1P53675 1640 aa11.75□□□□□ -0.53
POLR2C-205ENST00000563589 KIF1BO60333 1816 aa11.75□□□□□ -0.53
POLR2C-205ENST00000563589 RGS17Q9UGC6 210 aaPredicted RBP11.75□□□□□ -0.53
POLR2C-205ENST00000563589 TBX22Q9Y458 520 aa11.75□□□□□ -0.53
POLR2C-205ENST00000563589 DCCP43146 1447 aa11.75□□□□□ -0.53
POLR2C-205ENST00000563589 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
POLR2C-205ENST00000563589 NHSL1Q5SYE7 1610 aa11.74□□□□□ -0.53
POLR2C-205ENST00000563589 ITGAEP38570 1179 aa11.73□□□□□ -0.53
POLR2C-205ENST00000563589 NUTM2DQ5VT03 806 aaPredicted RBP11.73□□□□□ -0.53
POLR2C-205ENST00000563589 NALCNQ8IZF0 1738 aa11.73□□□□□ -0.53
POLR2C-205ENST00000563589 LRP6O75581 1613 aa11.72□□□□□ -0.53
POLR2C-205ENST00000563589 NEXMIFQ5QGS0 1516 aa11.72□□□□□ -0.53
POLR2C-205ENST00000563589 ASXL1Q8IXJ9 1541 aa11.72□□□□□ -0.53
POLR2C-205ENST00000563589 PTPRUQ92729 1446 aa11.72□□□□□ -0.53
POLR2C-205ENST00000563589 CADPS2Q86UW7 1296 aa11.72□□□□□ -0.53
POLR2C-205ENST00000563589 ATF3P18847 181 aa11.71□□□□□ -0.53
POLR2C-205ENST00000563589 SPATA31A6Q5VVP1 1343 aa11.7□□□□□ -0.54
POLR2C-205ENST00000563589 POTEAQ6S8J7 498 aa11.7□□□□□ -0.54
POLR2C-205ENST00000563589 MEX3CQ5U5Q3 659 aaKnown RBP11.69□□□□□ -0.54
POLR2C-205ENST00000563589 C19orf44Q9H6X5 657 aa11.69□□□□□ -0.54
POLR2C-205ENST00000563589 ZNF326Q5BKZ1 582 aaKnown RBP11.68□□□□□ -0.54
POLR2C-205ENST00000563589 ADGRL3Q9HAR2 1447 aa11.68□□□□□ -0.54
POLR2C-205ENST00000563589 AMOTL2Q9Y2J4 779 aa11.67□□□□□ -0.54
POLR2C-205ENST00000563589 MST1RQ04912 1400 aa11.67□□□□□ -0.54
POLR2C-205ENST00000563589 RRBP1Q9P2E9 1410 aaKnown RBP11.67□□□□□ -0.54
POLR2C-205ENST00000563589 NAIPQ13075 1403 aa11.66□□□□□ -0.54
POLR2C-205ENST00000563589 PPLO60437 1756 aa11.66□□□□□ -0.54
POLR2C-205ENST00000563589 BRINP3Q76B58 766 aa11.65□□□□□ -0.54
POLR2C-205ENST00000563589 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
POLR2C-205ENST00000563589 PTCH1Q13635 1447 aa11.64□□□□□ -0.55
POLR2C-205ENST00000563589 SETD5Q9C0A6 1442 aa11.64□□□□□ -0.55
POLR2C-205ENST00000563589 METP08581 1390 aa11.64□□□□□ -0.55
POLR2C-205ENST00000563589 LAMC1P11047 1609 aa11.64□□□□□ -0.55
POLR2C-205ENST00000563589 ZNF772Q68DY9 489 aaPredicted RBP11.63□□□□□ -0.55
POLR2C-205ENST00000563589 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
POLR2C-205ENST00000563589 PRAG1Q86YV5 1406 aa11.61□□□□□ -0.55
POLR2C-205ENST00000563589 CDK12Q9NYV4 1490 aaPredicted RBP11.61□□□□□ -0.55
POLR2C-205ENST00000563589 CDC42BPGQ6DT37 1551 aa11.6□□□□□ -0.55
POLR2C-205ENST00000563589 NUTM2BA6NNL0 878 aaPredicted RBP11.6□□□□□ -0.55
POLR2C-205ENST00000563589 NUTM2EB1AL46 878 aaPredicted RBP11.6□□□□□ -0.55
POLR2C-205ENST00000563589 NUTM2AQ8IVF1 878 aaPredicted RBP11.6□□□□□ -0.55
POLR2C-205ENST00000563589 IFT172Q9UG01 1749 aa11.6□□□□□ -0.55
POLR2C-205ENST00000563589 PNPLA6Q8IY17 1366 aa11.59□□□□□ -0.55
POLR2C-205ENST00000563589 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
POLR2C-205ENST00000563589 C1orf167Q5SNV9 1468 aa11.58□□□□□ -0.56
POLR2C-205ENST00000563589 KNDC1Q76NI1 1749 aa11.58□□□□□ -0.56
POLR2C-205ENST00000563589 COL22A1Q8NFW1 1626 aaPredicted RBP11.57□□□□□ -0.56
POLR2C-205ENST00000563589 LRRC59Q96AG4 307 aaKnown RBP11.57□□□□□ -0.56
POLR2C-205ENST00000563589 AFF2P51816 1311 aa11.57□□□□□ -0.56
POLR2C-205ENST00000563589 ROBO2Q9HCK4 1378 aa11.56□□□□□ -0.56
POLR2C-205ENST00000563589 VGFO15240 615 aaPredicted RBP11.56□□□□□ -0.56
POLR2C-205ENST00000563589 RXRBP28702 533 aa11.56□□□□□ -0.56
POLR2C-205ENST00000563589 MARF1Q9Y4F3 1742 aaKnown RBP11.55□□□□□ -0.56
POLR2C-205ENST00000563589 RGS12O14924 1447 aa11.55□□□□□ -0.56
POLR2C-205ENST00000563589 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
POLR2C-205ENST00000563589 CCDC144AA2RUR9 1427 aa11.54□□□□□ -0.56
POLR2C-205ENST00000563589 DDX17Q92841 729 aaKnown RBP11.54□□□□□ -0.56
POLR2C-205ENST00000563589 C8orf37Q96NL8 207 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms