RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 RIMS2Q9UQ26 1411 aa27.15■■□□□ 1.94
FANCA-212ENST00000563513 NEXMIFQ5QGS0 1516 aa27.13■■□□□ 1.93
FANCA-212ENST00000563513 NUTM2DQ5VT03 806 aaPredicted RBP27.12■■□□□ 1.93
FANCA-212ENST00000563513 L3MBTL2Q969R5 705 aa27.12■■□□□ 1.93
FANCA-212ENST00000563513 TXNDC2Q86VQ3 553 aa27.11■■□□□ 1.93
FANCA-212ENST00000563513 ANKLE2Q86XL3 938 aa27.09■■□□□ 1.93
FANCA-212ENST00000563513 NCKAP5LQ9HCH0 1330 aa27.09■■□□□ 1.93
FANCA-212ENST00000563513 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.08■■□□□ 1.93
FANCA-212ENST00000563513 PPLO60437 1756 aa27.07■■□□□ 1.92
FANCA-212ENST00000563513 HDGFP51858 240 aaKnown RBP27.07■■□□□ 1.92
FANCA-212ENST00000563513 DCAF11Q8TEB1 546 aa27.07■■□□□ 1.92
FANCA-212ENST00000563513 EID1Q9Y6B2 187 aa27.07■■□□□ 1.92
FANCA-212ENST00000563513 IFT172Q9UG01 1749 aa27.07■■□□□ 1.92
FANCA-212ENST00000563513 SCAF11Q99590 1463 aaKnown RBP27.06■■□□□ 1.92
FANCA-212ENST00000563513 ADGRF5Q8IZF2 1346 aa27.05■■□□□ 1.92
FANCA-212ENST00000563513 VGFO15240 615 aaPredicted RBP27.04■■□□□ 1.92
FANCA-212ENST00000563513 KDM2AQ9Y2K7 1162 aa27.04■■□□□ 1.92
FANCA-212ENST00000563513 TONSLQ96HA7 1378 aa27.04■■□□□ 1.92
FANCA-212ENST00000563513 STRCQ7RTU9 1775 aa27.04■■□□□ 1.92
FANCA-212ENST00000563513 TIMELESSQ9UNS1 1208 aa27.02■■□□□ 1.92
FANCA-212ENST00000563513 STAC3Q96MF2 364 aa27.01■■□□□ 1.91
FANCA-212ENST00000563513 MED14O60244 1454 aa27■■□□□ 1.91
FANCA-212ENST00000563513 PPP1R15AO75807 674 aaPredicted RBP27■■□□□ 1.91
FANCA-212ENST00000563513 MYOM2P54296 1465 aa27■■□□□ 1.91
FANCA-212ENST00000563513 PLEKHG1Q9ULL1 1385 aa26.99■■□□□ 1.91
FANCA-212ENST00000563513 NRXN1Q9ULB1 1477 aa26.99■■□□□ 1.91
FANCA-212ENST00000563513 SENP3Q9H4L4 574 aaPredicted RBP26.98■■□□□ 1.91
FANCA-212ENST00000563513 POLR1AO95602 1720 aaPredicted RBP26.98■■□□□ 1.91
FANCA-212ENST00000563513 NPHP4O75161 1426 aaPredicted RBP26.96■■□□□ 1.91
FANCA-212ENST00000563513 PIK3C2GO75747 1445 aa26.93■■□□□ 1.9
FANCA-212ENST00000563513 NRXN3Q9Y4C0 1643 aa26.93■■□□□ 1.9
FANCA-212ENST00000563513 ADAMTS13Q76LX8 1427 aa26.92■■□□□ 1.9
FANCA-212ENST00000563513 NBPF8Q3BBV2 869 aa26.92■■□□□ 1.9
FANCA-212ENST00000563513 SETBP1Q9Y6X0 1596 aa26.92■■□□□ 1.9
FANCA-212ENST00000563513 PRAG1Q86YV5 1406 aa26.9■■□□□ 1.9
FANCA-212ENST00000563513 BCANQ96GW7 911 aa26.9■■□□□ 1.9
FANCA-212ENST00000563513 SLC26A8Q96RN1 970 aa26.9■■□□□ 1.9
FANCA-212ENST00000563513 C14orf93Q9H972 538 aaKnown RBP26.89■■□□□ 1.9
FANCA-212ENST00000563513 IQGAP1P46940 1657 aa26.89■■□□□ 1.89
FANCA-212ENST00000563513 CFAP70Q5T0N1 1121 aa26.88■■□□□ 1.89
FANCA-212ENST00000563513 TBX22Q9Y458 520 aa26.88■■□□□ 1.89
FANCA-212ENST00000563513 ALKQ9UM73 1620 aa26.86■■□□□ 1.89
FANCA-212ENST00000563513 DMRT2Q9Y5R5 561 aa26.85■■□□□ 1.89
FANCA-212ENST00000563513 METP08581 1390 aa26.83■■□□□ 1.88
FANCA-212ENST00000563513 SETD1AO15047 1707 aaKnown RBP26.82■■□□□ 1.88
FANCA-212ENST00000563513 NBPF1Q3BBV0 1214 aa26.81■■□□□ 1.88
FANCA-212ENST00000563513 TMEM132EQ6IEE7 984 aa26.79■■□□□ 1.88
FANCA-212ENST00000563513 DIP2AQ14689 1571 aa26.79■■□□□ 1.88
FANCA-212ENST00000563513 ASXL1Q8IXJ9 1541 aa26.77■■□□□ 1.88
FANCA-212ENST00000563513 KIAA1210Q9ULL0 1709 aa26.76■■□□□ 1.87
FANCA-212ENST00000563513 PTPRUQ92729 1446 aa26.75■■□□□ 1.87
FANCA-212ENST00000563513 TRPM1Q7Z4N2 1603 aa26.75■■□□□ 1.87
FANCA-212ENST00000563513 ADGRB1O14514 1584 aa26.75■■□□□ 1.87
FANCA-212ENST00000563513 LAMC1P11047 1609 aa26.74■■□□□ 1.87
FANCA-212ENST00000563513 PIK3R4Q99570 1358 aa26.73■■□□□ 1.87
FANCA-212ENST00000563513 RALGAPBQ86X10 1494 aa26.71■■□□□ 1.87
FANCA-212ENST00000563513 KCNA6P17658 529 aa26.7■■□□□ 1.86
FANCA-212ENST00000563513 AMOTL2Q9Y2J4 779 aa26.7■■□□□ 1.86
FANCA-212ENST00000563513 CHD2O14647 1828 aaKnown RBP26.69■■□□□ 1.86
FANCA-212ENST00000563513 GPRASP1Q5JY77 1395 aa26.69■■□□□ 1.86
FANCA-212ENST00000563513 ZNF335Q9H4Z2 1342 aaPredicted RBP26.68■■□□□ 1.86
FANCA-212ENST00000563513 LRPPRCP42704 1394 aaKnown RBP26.68■■□□□ 1.86
FANCA-212ENST00000563513 YTHDC2Q9H6S0 1430 aaKnown RBP26.67■■□□□ 1.86
FANCA-212ENST00000563513 ROCK2O75116 1388 aaKnown RBP26.67■■□□□ 1.86
FANCA-212ENST00000563513 ZEB1P37275 1124 aaPredicted RBP26.66■■□□□ 1.86
FANCA-212ENST00000563513 STK26Q9P289 416 aa26.66■■□□□ 1.86
FANCA-212ENST00000563513 ABCC11Q96J66 1382 aa26.66■■□□□ 1.86
FANCA-212ENST00000563513 STRCP1A6NGW2 1772 aa26.66■■□□□ 1.86
FANCA-212ENST00000563513 NWD1Q149M9 1564 aa26.64■■□□□ 1.86
FANCA-212ENST00000563513 XRN1Q8IZH2 1706 aaKnown RBP26.63■■□□□ 1.85
FANCA-212ENST00000563513 CARD11Q9BXL7 1154 aa26.62■■□□□ 1.85
FANCA-212ENST00000563513 TRAK1Q9UPV9 953 aa26.62■■□□□ 1.85
FANCA-212ENST00000563513 TECPR2O15040 1411 aa26.62■■□□□ 1.85
FANCA-212ENST00000563513 ROBO2Q9HCK4 1378 aa26.59■■□□□ 1.85
FANCA-212ENST00000563513 SIRT1Q96EB6 747 aa26.59■■□□□ 1.85
FANCA-212ENST00000563513 LTBP4Q8N2S1 1624 aa26.58■■□□□ 1.85
FANCA-212ENST00000563513 KNDC1Q76NI1 1749 aa26.56■■□□□ 1.84
FANCA-212ENST00000563513 WAPLQ7Z5K2 1190 aa26.56■■□□□ 1.84
FANCA-212ENST00000563513 PTCH1Q13635 1447 aa26.56■■□□□ 1.84
FANCA-212ENST00000563513 NKTRP30414 1462 aaKnown RBP26.55■■□□□ 1.84
FANCA-212ENST00000563513 DLC1Q96QB1 1528 aa26.55■■□□□ 1.84
FANCA-212ENST00000563513 PLEKHH1Q9ULM0 1364 aa26.55■■□□□ 1.84
FANCA-212ENST00000563513 CPS1P31327 1500 aa26.55■■□□□ 1.84
FANCA-212ENST00000563513 PROSER2Q86WR7 435 aaPredicted RBP26.54■■□□□ 1.84
FANCA-212ENST00000563513 RBM33Q96EV2 1170 aaKnown RBP26.54■■□□□ 1.84
FANCA-212ENST00000563513 FAM135BQ49AJ0 1406 aa26.53■■□□□ 1.84
FANCA-212ENST00000563513 PRAM1Q96QH2 718 aa26.52■■□□□ 1.84
FANCA-212ENST00000563513 LRRC7Q96NW7 1537 aa26.51■■□□□ 1.83
FANCA-212ENST00000563513 ARHGEF28Q8N1W1 1705 aaKnown RBP26.51■■□□□ 1.83
FANCA-212ENST00000563513 TMEM94Q12767 1356 aa26.48■■□□□ 1.83
FANCA-212ENST00000563513 USP47Q96K76 1375 aa26.47■■□□□ 1.83
FANCA-212ENST00000563513 POGKQ9P215 609 aa26.47■■□□□ 1.83
FANCA-212ENST00000563513 ST20-MTHFSA0A0A6YYL1 179 aa26.45■■□□□ 1.82
FANCA-212ENST00000563513 SAFB2Q14151 953 aaKnown RBP eCLIP26.45■■□□□ 1.82
FANCA-212ENST00000563513 XIRP1Q702N8 1843 aaKnown RBP26.44■■□□□ 1.82
FANCA-212ENST00000563513 CENPJQ9HC77 1338 aaPredicted RBP26.44■■□□□ 1.82
FANCA-212ENST00000563513 NCOA3Q9Y6Q9 1424 aa26.44■■□□□ 1.82
FANCA-212ENST00000563513 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.43■■□□□ 1.82
FANCA-212ENST00000563513 EIF3AQ14152 1382 aaKnown RBP26.43■■□□□ 1.82
FANCA-212ENST00000563513 HSPA5P11021 654 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms