RNA–Protein interactions for RNA: ENST00000563364.2

NIP7-205, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 2

Gene NIP7, Length 436 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-205ENST00000563364 TMEM131LA2VDJ0 1609 aa31.67■■■□□ 2.66
NIP7-205ENST00000563364 FAM135BQ49AJ0 1406 aa31.67■■■□□ 2.66
NIP7-205ENST00000563364 NKTRP30414 1462 aaKnown RBP31.67■■■□□ 2.66
NIP7-205ENST00000563364 HDGFP51858 240 aaKnown RBP31.67■■■□□ 2.66
NIP7-205ENST00000563364 PLEKHG1Q9ULL1 1385 aa31.66■■■□□ 2.66
NIP7-205ENST00000563364 PROSER2Q86WR7 435 aaPredicted RBP31.65■■■□□ 2.66
NIP7-205ENST00000563364 IQGAP3Q86VI3 1631 aa31.64■■■□□ 2.66
NIP7-205ENST00000563364 E9PCH4 1651 aa31.64■■■□□ 2.66
NIP7-205ENST00000563364 SENP3Q9H4L4 574 aaPredicted RBP31.64■■■□□ 2.66
NIP7-205ENST00000563364 RIMS2Q9UQ26 1411 aa31.64■■■□□ 2.66
NIP7-205ENST00000563364 PHF23Q9BUL5 403 aaPredicted RBP31.63■■■□□ 2.65
NIP7-205ENST00000563364 BCANQ96GW7 911 aa31.62■■■□□ 2.65
NIP7-205ENST00000563364 CHD2O14647 1828 aaKnown RBP31.59■■■□□ 2.65
NIP7-205ENST00000563364 PPP1R15AO75807 674 aaPredicted RBP31.58■■■□□ 2.65
NIP7-205ENST00000563364 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.58■■■□□ 2.65
NIP7-205ENST00000563364 RBM33Q96EV2 1170 aaKnown RBP31.55■■■□□ 2.64
NIP7-205ENST00000563364 TBX22Q9Y458 520 aa31.55■■■□□ 2.64
NIP7-205ENST00000563364 NUP155O75694 1391 aa31.55■■■□□ 2.64
NIP7-205ENST00000563364 MSH6P52701 1360 aa31.54■■■□□ 2.64
NIP7-205ENST00000563364 ROBO1Q9Y6N7 1651 aa31.53■■■□□ 2.64
NIP7-205ENST00000563364 CHGAP10645 457 aaKnown RBP31.52■■■□□ 2.64
NIP7-205ENST00000563364 ITGAEP38570 1179 aa31.5■■■□□ 2.63
NIP7-205ENST00000563364 NCOA3Q9Y6Q9 1424 aa31.49■■■□□ 2.63
NIP7-205ENST00000563364 DIP2AQ14689 1571 aa31.48■■■□□ 2.63
NIP7-205ENST00000563364 ADAMTS13Q76LX8 1427 aa31.48■■■□□ 2.63
NIP7-205ENST00000563364 PIK3R4Q99570 1358 aa31.46■■■□□ 2.63
NIP7-205ENST00000563364 SLAIN2Q9P270 581 aa31.45■■■□□ 2.63
NIP7-205ENST00000563364 PPARGC1BQ86YN6 1023 aaKnown RBP31.43■■■□□ 2.62
NIP7-205ENST00000563364 NUTM2DQ5VT03 806 aaPredicted RBP31.41■■■□□ 2.62
NIP7-205ENST00000563364 RGS17Q9UGC6 210 aaPredicted RBP31.41■■■□□ 2.62
NIP7-205ENST00000563364 SPHKAPQ2M3C7 1700 aa31.39■■■□□ 2.62
NIP7-205ENST00000563364 TRPM2O94759 1503 aa31.37■■■□□ 2.61
NIP7-205ENST00000563364 RRBP1Q9P2E9 1410 aaKnown RBP31.35■■■□□ 2.61
NIP7-205ENST00000563364 PHLPP1O60346 1717 aa31.35■■■□□ 2.61
NIP7-205ENST00000563364 C19orf44Q9H6X5 657 aa31.32■■■□□ 2.6
NIP7-205ENST00000563364 C14orf37Q86TY3 774 aa31.31■■■□□ 2.6
NIP7-205ENST00000563364 CADPS2Q86UW7 1296 aa31.31■■■□□ 2.6
NIP7-205ENST00000563364 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.31■■■□□ 2.6
NIP7-205ENST00000563364 AMOTL2Q9Y2J4 779 aa31.3■■■□□ 2.6
NIP7-205ENST00000563364 SETBP1Q9Y6X0 1596 aa31.3■■■□□ 2.6
NIP7-205ENST00000563364 PTPRUQ92729 1446 aa31.29■■■□□ 2.6
NIP7-205ENST00000563364 JCADQ9P266 1359 aa31.29■■■□□ 2.6
NIP7-205ENST00000563364 NRXN3Q9Y4C0 1643 aa31.28■■■□□ 2.6
NIP7-205ENST00000563364 NAIPQ13075 1403 aa31.26■■■□□ 2.6
NIP7-205ENST00000563364 COL16A1Q07092 1604 aaPredicted RBP31.26■■■□□ 2.59
NIP7-205ENST00000563364 ATF3P18847 181 aa31.25■■■□□ 2.59
NIP7-205ENST00000563364 ZNF326Q5BKZ1 582 aaKnown RBP31.24■■■□□ 2.59
NIP7-205ENST00000563364 XRN1Q8IZH2 1706 aaKnown RBP31.24■■■□□ 2.59
NIP7-205ENST00000563364 CLTCL1P53675 1640 aa31.22■■■□□ 2.59
NIP7-205ENST00000563364 AHDC1Q5TGY3 1603 aaPredicted RBP31.21■■■□□ 2.59
NIP7-205ENST00000563364 DCCP43146 1447 aa31.21■■■□□ 2.59
NIP7-205ENST00000563364 POTEAQ6S8J7 498 aa31.2■■■□□ 2.59
NIP7-205ENST00000563364 NEXMIFQ5QGS0 1516 aa31.19■■■□□ 2.58
NIP7-205ENST00000563364 KIF1BO60333 1816 aa31.17■■■□□ 2.58
NIP7-205ENST00000563364 METP08581 1390 aa31.16■■■□□ 2.58
NIP7-205ENST00000563364 SPATA31A6Q5VVP1 1343 aa31.15■■■□□ 2.58
NIP7-205ENST00000563364 HFM1A2PYH4 1435 aa31.15■■■□□ 2.58
NIP7-205ENST00000563364 BRINP3Q76B58 766 aa31.12■■■□□ 2.57
NIP7-205ENST00000563364 SHPRHQ149N8 1683 aa31.11■■■□□ 2.57
NIP7-205ENST00000563364 TRIM52Q96A61 297 aa31.07■■■□□ 2.56
NIP7-205ENST00000563364 MST1RQ04912 1400 aa31.07■■■□□ 2.56
NIP7-205ENST00000563364 LRP6O75581 1613 aa31.06■■■□□ 2.56
NIP7-205ENST00000563364 ASXL1Q8IXJ9 1541 aa31.05■■■□□ 2.56
NIP7-205ENST00000563364 VGFO15240 615 aaPredicted RBP31.05■■■□□ 2.56
NIP7-205ENST00000563364 ADGRL3Q9HAR2 1447 aa31.05■■■□□ 2.56
NIP7-205ENST00000563364 RPGRIP1LQ68CZ1 1315 aa31.02■■■□□ 2.56
NIP7-205ENST00000563364 SLC4A1APQ9BWU0 796 aaKnown RBP31.02■■■□□ 2.56
NIP7-205ENST00000563364 NHSL1Q5SYE7 1610 aa31.01■■■□□ 2.55
NIP7-205ENST00000563364 SETD5Q9C0A6 1442 aa31■■■□□ 2.55
NIP7-205ENST00000563364 SETD1AO15047 1707 aaKnown RBP31■■■□□ 2.55
NIP7-205ENST00000563364 NALCNQ8IZF0 1738 aa30.99■■■□□ 2.55
NIP7-205ENST00000563364 MEX3CQ5U5Q3 659 aaKnown RBP30.99■■■□□ 2.55
NIP7-205ENST00000563364 PTCH1Q13635 1447 aa30.98■■■□□ 2.55
NIP7-205ENST00000563364 ZNF772Q68DY9 489 aaPredicted RBP30.98■■■□□ 2.55
NIP7-205ENST00000563364 PRAG1Q86YV5 1406 aa30.96■■■□□ 2.55
NIP7-205ENST00000563364 PPLO60437 1756 aa30.94■■■□□ 2.54
NIP7-205ENST00000563364 LRRC59Q96AG4 307 aaKnown RBP30.93■■■□□ 2.54
NIP7-205ENST00000563364 ROBO2Q9HCK4 1378 aa30.9■■■□□ 2.54
NIP7-205ENST00000563364 C1orf167Q5SNV9 1468 aa30.89■■■□□ 2.54
NIP7-205ENST00000563364 NUTM2BA6NNL0 878 aaPredicted RBP30.87■■■□□ 2.53
NIP7-205ENST00000563364 NUTM2EB1AL46 878 aaPredicted RBP30.87■■■□□ 2.53
NIP7-205ENST00000563364 NUTM2AQ8IVF1 878 aaPredicted RBP30.87■■■□□ 2.53
NIP7-205ENST00000563364 LAMC1P11047 1609 aa30.86■■■□□ 2.53
NIP7-205ENST00000563364 PNPLA6Q8IY17 1366 aa30.83■■■□□ 2.53
NIP7-205ENST00000563364 FOXD1Q16676 465 aa30.83■■■□□ 2.53
NIP7-205ENST00000563364 DDX17Q92841 729 aaKnown RBP30.83■■■□□ 2.53
NIP7-205ENST00000563364 CCDC144AA2RUR9 1427 aa30.82■■■□□ 2.52
NIP7-205ENST00000563364 RXRBP28702 533 aa30.79■■■□□ 2.52
NIP7-205ENST00000563364 SPATA31E1Q6ZUB1 1445 aa30.79■■■□□ 2.52
NIP7-205ENST00000563364 AFF2P51816 1311 aa30.78■■■□□ 2.52
NIP7-205ENST00000563364 MPHOSPH9Q99550 1183 aa30.78■■■□□ 2.52
NIP7-205ENST00000563364 CDK12Q9NYV4 1490 aaPredicted RBP30.77■■■□□ 2.52
NIP7-205ENST00000563364 ANKRD30BQ9BXX2 1392 aa30.77■■■□□ 2.52
NIP7-205ENST00000563364 SOS2Q07890 1332 aaPredicted RBP30.76■■■□□ 2.52
NIP7-205ENST00000563364 ADGRF5Q8IZF2 1346 aa30.76■■■□□ 2.52
NIP7-205ENST00000563364 ORAI2Q96SN7 254 aa30.76■■■□□ 2.51
NIP7-205ENST00000563364 IFT172Q9UG01 1749 aa30.76■■■□□ 2.51
NIP7-205ENST00000563364 ACIN1Q9UKV3 1341 aaKnown RBP30.74■■■□□ 2.51
NIP7-205ENST00000563364 CDC42BPGQ6DT37 1551 aa30.73■■■□□ 2.51
NIP7-205ENST00000563364 RGL3Q3MIN7 710 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms