RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 HSPA1LP34931 641 aa23.04■■□□□ 1.28
LPCAT4-204ENST00000563240 HDGFP51858 240 aaKnown RBP23.04■■□□□ 1.28
LPCAT4-204ENST00000563240 RIMS2Q9UQ26 1411 aa23.04■■□□□ 1.28
LPCAT4-204ENST00000563240 NAIPQ13075 1403 aa23.03■■□□□ 1.28
LPCAT4-204ENST00000563240 TRIM52Q96A61 297 aa23.03■■□□□ 1.28
LPCAT4-204ENST00000563240 RBM33Q96EV2 1170 aaKnown RBP23.03■■□□□ 1.28
LPCAT4-204ENST00000563240 KCNA6P17658 529 aa23.01■■□□□ 1.27
LPCAT4-204ENST00000563240 ZFYVE9O95405 1425 aa23■■□□□ 1.27
LPCAT4-204ENST00000563240 TMEM131LA2VDJ0 1609 aa23■■□□□ 1.27
LPCAT4-204ENST00000563240 PROSER2Q86WR7 435 aaPredicted RBP22.99■■□□□ 1.27
LPCAT4-204ENST00000563240 MYO5BQ9ULV0 1848 aa22.98■■□□□ 1.27
LPCAT4-204ENST00000563240 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.98■■□□□ 1.27
LPCAT4-204ENST00000563240 PLEKHG1Q9ULL1 1385 aa22.97■■□□□ 1.27
LPCAT4-204ENST00000563240 TMEM94Q12767 1356 aa22.96■■□□□ 1.27
LPCAT4-204ENST00000563240 ALKQ9UM73 1620 aa22.95■■□□□ 1.26
LPCAT4-204ENST00000563240 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
LPCAT4-204ENST00000563240 HFM1A2PYH4 1435 aa22.93■■□□□ 1.26
LPCAT4-204ENST00000563240 SLC4A1APQ9BWU0 796 aaKnown RBP22.91■■□□□ 1.26
LPCAT4-204ENST00000563240 TBX22Q9Y458 520 aa22.91■■□□□ 1.26
LPCAT4-204ENST00000563240 ILDR2Q71H61 639 aa22.88■■□□□ 1.25
LPCAT4-204ENST00000563240 SPHKAPQ2M3C7 1700 aa22.87■■□□□ 1.25
LPCAT4-204ENST00000563240 ADAMTS13Q76LX8 1427 aa22.86■■□□□ 1.25
LPCAT4-204ENST00000563240 XIRP1Q702N8 1843 aaKnown RBP22.86■■□□□ 1.25
LPCAT4-204ENST00000563240 FOXD1Q16676 465 aa22.85■■□□□ 1.25
LPCAT4-204ENST00000563240 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
LPCAT4-204ENST00000563240 NKTRP30414 1462 aaKnown RBP22.83■■□□□ 1.25
LPCAT4-204ENST00000563240 NWD1Q149M9 1564 aa22.82■■□□□ 1.24
LPCAT4-204ENST00000563240 MSH6P52701 1360 aa22.81■■□□□ 1.24
LPCAT4-204ENST00000563240 AMOTL2Q9Y2J4 779 aa22.81■■□□□ 1.24
LPCAT4-204ENST00000563240 CLTCL1P53675 1640 aa22.81■■□□□ 1.24
LPCAT4-204ENST00000563240 TRPM2O94759 1503 aa22.8■■□□□ 1.24
LPCAT4-204ENST00000563240 CHD2O14647 1828 aaKnown RBP22.78■■□□□ 1.24
LPCAT4-204ENST00000563240 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
LPCAT4-204ENST00000563240 SLAIN2Q9P270 581 aa22.76■■□□□ 1.23
LPCAT4-204ENST00000563240 PIK3R4Q99570 1358 aa22.76■■□□□ 1.23
LPCAT4-204ENST00000563240 FAM135BQ49AJ0 1406 aa22.75■■□□□ 1.23
LPCAT4-204ENST00000563240 PTPRUQ92729 1446 aa22.75■■□□□ 1.23
LPCAT4-204ENST00000563240 DIP2AQ14689 1571 aa22.74■■□□□ 1.23
LPCAT4-204ENST00000563240 METP08581 1390 aa22.73■■□□□ 1.23
LPCAT4-204ENST00000563240 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
LPCAT4-204ENST00000563240 MED1Q15648 1581 aaPredicted RBP22.71■■□□□ 1.23
LPCAT4-204ENST00000563240 VGFO15240 615 aaPredicted RBP22.7■■□□□ 1.22
LPCAT4-204ENST00000563240 ATF3P18847 181 aa22.7■■□□□ 1.22
LPCAT4-204ENST00000563240 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
LPCAT4-204ENST00000563240 C19orf44Q9H6X5 657 aa22.7■■□□□ 1.22
LPCAT4-204ENST00000563240 KIF1BO60333 1816 aa22.69■■□□□ 1.22
LPCAT4-204ENST00000563240 NRXN3Q9Y4C0 1643 aa22.69■■□□□ 1.22
LPCAT4-204ENST00000563240 SETBP1Q9Y6X0 1596 aa22.69■■□□□ 1.22
LPCAT4-204ENST00000563240 RGL3Q3MIN7 710 aa22.69■■□□□ 1.22
LPCAT4-204ENST00000563240 SETD5Q9C0A6 1442 aa22.68■■□□□ 1.22
LPCAT4-204ENST00000563240 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
LPCAT4-204ENST00000563240 ROBO1Q9Y6N7 1651 aa22.67■■□□□ 1.22
LPCAT4-204ENST00000563240 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
LPCAT4-204ENST00000563240 CADPS2Q86UW7 1296 aa22.66■■□□□ 1.22
LPCAT4-204ENST00000563240 CCDC144AA2RUR9 1427 aa22.65■■□□□ 1.22
LPCAT4-204ENST00000563240 SOCS7O14512 581 aa22.63■■□□□ 1.21
LPCAT4-204ENST00000563240 RAB3GAP2Q9H2M9 1393 aa22.61■■□□□ 1.21
LPCAT4-204ENST00000563240 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.6■■□□□ 1.21
LPCAT4-204ENST00000563240 XRN1Q8IZH2 1706 aaKnown RBP22.59■■□□□ 1.21
LPCAT4-204ENST00000563240 ADGRF5Q8IZF2 1346 aa22.58■■□□□ 1.21
LPCAT4-204ENST00000563240 ACIN1Q9UKV3 1341 aaKnown RBP22.57■■□□□ 1.2
LPCAT4-204ENST00000563240 BRINP3Q76B58 766 aa22.55■■□□□ 1.2
LPCAT4-204ENST00000563240 SPATA31E1Q6ZUB1 1445 aa22.55■■□□□ 1.2
LPCAT4-204ENST00000563240 PHLPP1O60346 1717 aa22.54■■□□□ 1.2
LPCAT4-204ENST00000563240 ROBO2Q9HCK4 1378 aa22.53■■□□□ 1.2
LPCAT4-204ENST00000563240 PPLO60437 1756 aa22.53■■□□□ 1.2
LPCAT4-204ENST00000563240 STK26Q9P289 416 aa22.52■■□□□ 1.2
LPCAT4-204ENST00000563240 RGS17Q9UGC6 210 aaPredicted RBP22.52■■□□□ 1.2
LPCAT4-204ENST00000563240 ADGRL3Q9HAR2 1447 aa22.51■■□□□ 1.19
LPCAT4-204ENST00000563240 JCADQ9P266 1359 aa22.5■■□□□ 1.19
LPCAT4-204ENST00000563240 DCCP43146 1447 aa22.5■■□□□ 1.19
LPCAT4-204ENST00000563240 ANKRD30BQ9BXX2 1392 aa22.5■■□□□ 1.19
LPCAT4-204ENST00000563240 MST1RQ04912 1400 aa22.49■■□□□ 1.19
LPCAT4-204ENST00000563240 TMEM132EQ6IEE7 984 aa22.49■■□□□ 1.19
LPCAT4-204ENST00000563240 DDX17Q92841 729 aaKnown RBP22.47■■□□□ 1.19
LPCAT4-204ENST00000563240 SETD1AO15047 1707 aaKnown RBP22.47■■□□□ 1.19
LPCAT4-204ENST00000563240 PTCH1Q13635 1447 aa22.46■■□□□ 1.19
LPCAT4-204ENST00000563240 COL16A1Q07092 1604 aaPredicted RBP22.46■■□□□ 1.19
LPCAT4-204ENST00000563240 WAPLQ7Z5K2 1190 aa22.44■■□□□ 1.18
LPCAT4-204ENST00000563240 NALCNQ8IZF0 1738 aa22.43■■□□□ 1.18
LPCAT4-204ENST00000563240 ASXL1Q8IXJ9 1541 aa22.43■■□□□ 1.18
LPCAT4-204ENST00000563240 AHDC1Q5TGY3 1603 aaPredicted RBP22.42■■□□□ 1.18
LPCAT4-204ENST00000563240 NUTM2BA6NNL0 878 aaPredicted RBP22.42■■□□□ 1.18
LPCAT4-204ENST00000563240 NUTM2EB1AL46 878 aaPredicted RBP22.42■■□□□ 1.18
LPCAT4-204ENST00000563240 NUTM2AQ8IVF1 878 aaPredicted RBP22.42■■□□□ 1.18
LPCAT4-204ENST00000563240 ORAI2Q96SN7 254 aa22.42■■□□□ 1.18
LPCAT4-204ENST00000563240 CFAP70Q5T0N1 1121 aa22.41■■□□□ 1.18
LPCAT4-204ENST00000563240 MEX3CQ5U5Q3 659 aaKnown RBP22.41■■□□□ 1.18
LPCAT4-204ENST00000563240 POTEAQ6S8J7 498 aa22.41■■□□□ 1.18
LPCAT4-204ENST00000563240 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
LPCAT4-204ENST00000563240 C1orf167Q5SNV9 1468 aa22.4■■□□□ 1.18
LPCAT4-204ENST00000563240 LRPPRCP42704 1394 aaKnown RBP22.39■■□□□ 1.18
LPCAT4-204ENST00000563240 SPATA31A6Q5VVP1 1343 aa22.39■■□□□ 1.18
LPCAT4-204ENST00000563240 HRCP23327 699 aa22.39■■□□□ 1.17
LPCAT4-204ENST00000563240 C14orf93Q9H972 538 aaKnown RBP22.39■■□□□ 1.17
LPCAT4-204ENST00000563240 KDM2AQ9Y2K7 1162 aa22.39■■□□□ 1.17
LPCAT4-204ENST00000563240 IFT172Q9UG01 1749 aa22.38■■□□□ 1.17
LPCAT4-204ENST00000563240 NUTM2FA1L443 756 aa22.38■■□□□ 1.17
LPCAT4-204ENST00000563240 PRAG1Q86YV5 1406 aa22.38■■□□□ 1.17
LPCAT4-204ENST00000563240 PLEKHH1Q9ULM0 1364 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms