RNA–Protein interactions for RNA: ENST00000562882.5

CDH11-205, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-205ENST00000562882 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.53■□□□□ 0.56
CDH11-205ENST00000562882 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
CDH11-205ENST00000562882 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
CDH11-205ENST00000562882 MYO5BQ9ULV0 1848 aa18.53■□□□□ 0.56
CDH11-205ENST00000562882 LTKP29376 864 aa18.52■□□□□ 0.56
CDH11-205ENST00000562882 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
CDH11-205ENST00000562882 RIMS2Q9UQ26 1411 aa18.5■□□□□ 0.55
CDH11-205ENST00000562882 NEUROD1Q13562 356 aa18.5■□□□□ 0.55
CDH11-205ENST00000562882 NCKAP5LQ9HCH0 1330 aa18.49■□□□□ 0.55
CDH11-205ENST00000562882 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
CDH11-205ENST00000562882 STAC3Q96MF2 364 aa18.48■□□□□ 0.55
CDH11-205ENST00000562882 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
CDH11-205ENST00000562882 SCAF11Q99590 1463 aaKnown RBP18.47■□□□□ 0.55
CDH11-205ENST00000562882 POLR1AO95602 1720 aaPredicted RBP18.46■□□□□ 0.55
CDH11-205ENST00000562882 NEXMIFQ5QGS0 1516 aa18.45■□□□□ 0.54
CDH11-205ENST00000562882 PPP1R15AO75807 674 aaPredicted RBP18.45■□□□□ 0.54
CDH11-205ENST00000562882 NUTM2DQ5VT03 806 aaPredicted RBP18.45■□□□□ 0.54
CDH11-205ENST00000562882 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
CDH11-205ENST00000562882 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
CDH11-205ENST00000562882 NPHP4O75161 1426 aaPredicted RBP18.42■□□□□ 0.54
CDH11-205ENST00000562882 PPLO60437 1756 aa18.42■□□□□ 0.54
CDH11-205ENST00000562882 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
CDH11-205ENST00000562882 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
CDH11-205ENST00000562882 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
CDH11-205ENST00000562882 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
CDH11-205ENST00000562882 BCANQ96GW7 911 aa18.39■□□□□ 0.53
CDH11-205ENST00000562882 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
CDH11-205ENST00000562882 ADGRF5Q8IZF2 1346 aa18.39■□□□□ 0.53
CDH11-205ENST00000562882 IQGAP1P46940 1657 aa18.38■□□□□ 0.53
CDH11-205ENST00000562882 MYOM2P54296 1465 aa18.38■□□□□ 0.53
CDH11-205ENST00000562882 TBX22Q9Y458 520 aa18.37■□□□□ 0.53
CDH11-205ENST00000562882 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
CDH11-205ENST00000562882 NRXN1Q9ULB1 1477 aa18.36■□□□□ 0.53
CDH11-205ENST00000562882 SETBP1Q9Y6X0 1596 aa18.35■□□□□ 0.53
CDH11-205ENST00000562882 SLC26A8Q96RN1 970 aa18.35■□□□□ 0.53
CDH11-205ENST00000562882 PIK3C2GO75747 1445 aa18.33■□□□□ 0.53
CDH11-205ENST00000562882 ADAMTS13Q76LX8 1427 aa18.33■□□□□ 0.53
CDH11-205ENST00000562882 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
CDH11-205ENST00000562882 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
CDH11-205ENST00000562882 ZNF335Q9H4Z2 1342 aaPredicted RBP18.31■□□□□ 0.52
CDH11-205ENST00000562882 NRXN3Q9Y4C0 1643 aa18.31■□□□□ 0.52
CDH11-205ENST00000562882 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
CDH11-205ENST00000562882 ALKQ9UM73 1620 aa18.3■□□□□ 0.52
CDH11-205ENST00000562882 PIK3R4Q99570 1358 aa18.3■□□□□ 0.52
CDH11-205ENST00000562882 STRCP1A6NGW2 1772 aa18.28■□□□□ 0.52
CDH11-205ENST00000562882 CFAP70Q5T0N1 1121 aa18.28■□□□□ 0.52
CDH11-205ENST00000562882 PRAG1Q86YV5 1406 aa18.28■□□□□ 0.52
CDH11-205ENST00000562882 KCNA6P17658 529 aa18.26■□□□□ 0.51
CDH11-205ENST00000562882 METP08581 1390 aa18.26■□□□□ 0.51
CDH11-205ENST00000562882 IQSEC2Q5JU85 1478 aa18.26■□□□□ 0.51
CDH11-205ENST00000562882 NWD1Q149M9 1564 aa18.25■□□□□ 0.51
CDH11-205ENST00000562882 CPS1P31327 1500 aa18.24■□□□□ 0.51
CDH11-205ENST00000562882 NBPF8Q3BBV2 869 aa18.24■□□□□ 0.51
CDH11-205ENST00000562882 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
CDH11-205ENST00000562882 LAMC1P11047 1609 aa18.23■□□□□ 0.51
CDH11-205ENST00000562882 SETD1AO15047 1707 aaKnown RBP18.23■□□□□ 0.51
CDH11-205ENST00000562882 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
CDH11-205ENST00000562882 AMOTL2Q9Y2J4 779 aa18.22■□□□□ 0.51
CDH11-205ENST00000562882 KIAA1210Q9ULL0 1709 aa18.22■□□□□ 0.51
CDH11-205ENST00000562882 CHD2O14647 1828 aaKnown RBP18.21■□□□□ 0.51
CDH11-205ENST00000562882 PTPRUQ92729 1446 aa18.21■□□□□ 0.51
CDH11-205ENST00000562882 LRRC7Q96NW7 1537 aa18.2■□□□□ 0.5
CDH11-205ENST00000562882 NBPF1Q3BBV0 1214 aa18.2■□□□□ 0.5
CDH11-205ENST00000562882 LRPPRCP42704 1394 aaKnown RBP18.18■□□□□ 0.5
CDH11-205ENST00000562882 NKTRP30414 1462 aaKnown RBP18.18■□□□□ 0.5
CDH11-205ENST00000562882 ABCC11Q96J66 1382 aa18.17■□□□□ 0.5
CDH11-205ENST00000562882 ADGRB1O14514 1584 aa18.17■□□□□ 0.5
CDH11-205ENST00000562882 YTHDC2Q9H6S0 1430 aaKnown RBP18.17■□□□□ 0.5
CDH11-205ENST00000562882 SIRT1Q96EB6 747 aa18.17■□□□□ 0.5
CDH11-205ENST00000562882 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
CDH11-205ENST00000562882 STK26Q9P289 416 aa18.16■□□□□ 0.5
CDH11-205ENST00000562882 ASXL1Q8IXJ9 1541 aa18.16■□□□□ 0.5
CDH11-205ENST00000562882 XRN1Q8IZH2 1706 aaKnown RBP18.15■□□□□ 0.5
CDH11-205ENST00000562882 PROSER2Q86WR7 435 aaPredicted RBP18.15■□□□□ 0.5
CDH11-205ENST00000562882 ROCK2O75116 1388 aaKnown RBP18.15■□□□□ 0.5
CDH11-205ENST00000562882 XIRP1Q702N8 1843 aaKnown RBP18.14■□□□□ 0.49
CDH11-205ENST00000562882 TECPR2O15040 1411 aa18.14■□□□□ 0.49
CDH11-205ENST00000562882 RALGAPBQ86X10 1494 aa18.14■□□□□ 0.49
CDH11-205ENST00000562882 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
CDH11-205ENST00000562882 TRAK1Q9UPV9 953 aa18.12■□□□□ 0.49
CDH11-205ENST00000562882 PTCH1Q13635 1447 aa18.12■□□□□ 0.49
CDH11-205ENST00000562882 CARD11Q9BXL7 1154 aa18.11■□□□□ 0.49
CDH11-205ENST00000562882 ROBO2Q9HCK4 1378 aa18.11■□□□□ 0.49
CDH11-205ENST00000562882 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
CDH11-205ENST00000562882 FAM135BQ49AJ0 1406 aa18.1■□□□□ 0.49
CDH11-205ENST00000562882 FBXO41Q8TF61 875 aa18.1■□□□□ 0.49
CDH11-205ENST00000562882 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
CDH11-205ENST00000562882 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
CDH11-205ENST00000562882 TMEM94Q12767 1356 aa18.08■□□□□ 0.49
CDH11-205ENST00000562882 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.48
CDH11-205ENST00000562882 WAPLQ7Z5K2 1190 aa18.08■□□□□ 0.48
CDH11-205ENST00000562882 RBM33Q96EV2 1170 aaKnown RBP18.07■□□□□ 0.48
CDH11-205ENST00000562882 PRAM1Q96QH2 718 aa18.07■□□□□ 0.48
CDH11-205ENST00000562882 POGKQ9P215 609 aa18.06■□□□□ 0.48
CDH11-205ENST00000562882 C19orf44Q9H6X5 657 aa18.05■□□□□ 0.48
CDH11-205ENST00000562882 PLEKHH1Q9ULM0 1364 aa18.04■□□□□ 0.48
CDH11-205ENST00000562882 ILDR1Q86SU0 546 aaPredicted RBP18.03■□□□□ 0.48
CDH11-205ENST00000562882 C14orf37Q86TY3 774 aa18.03■□□□□ 0.48
CDH11-205ENST00000562882 EIF3AQ14152 1382 aaKnown RBP18.03■□□□□ 0.48
CDH11-205ENST00000562882 CENPJQ9HC77 1338 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms