RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
KLHDC4-209ENST00000562872 SLC52A1Q9NWF4 448 aa16.94■□□□□ 0.3
KLHDC4-209ENST00000562872 XIRP1Q702N8 1843 aaKnown RBP16.93■□□□□ 0.3
KLHDC4-209ENST00000562872 NUP155O75694 1391 aa16.93■□□□□ 0.3
KLHDC4-209ENST00000562872 RIMS2Q9UQ26 1411 aa16.9■□□□□ 0.3
KLHDC4-209ENST00000562872 RBM33Q96EV2 1170 aaKnown RBP16.89■□□□□ 0.29
KLHDC4-209ENST00000562872 NWD1Q149M9 1564 aa16.88■□□□□ 0.29
KLHDC4-209ENST00000562872 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
KLHDC4-209ENST00000562872 NUTM2DQ5VT03 806 aaPredicted RBP16.87■□□□□ 0.29
KLHDC4-209ENST00000562872 TMEM94Q12767 1356 aa16.87■□□□□ 0.29
KLHDC4-209ENST00000562872 PLEKHG1Q9ULL1 1385 aa16.87■□□□□ 0.29
KLHDC4-209ENST00000562872 NAIPQ13075 1403 aa16.87■□□□□ 0.29
KLHDC4-209ENST00000562872 KCNA6P17658 529 aa16.86■□□□□ 0.29
KLHDC4-209ENST00000562872 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
KLHDC4-209ENST00000562872 ADAMTS13Q76LX8 1427 aa16.83■□□□□ 0.28
KLHDC4-209ENST00000562872 BCANQ96GW7 911 aa16.83■□□□□ 0.28
KLHDC4-209ENST00000562872 SPHKAPQ2M3C7 1700 aa16.82■□□□□ 0.28
KLHDC4-209ENST00000562872 NKTRP30414 1462 aaKnown RBP16.82■□□□□ 0.28
KLHDC4-209ENST00000562872 PPP1R15AO75807 674 aaPredicted RBP16.82■□□□□ 0.28
KLHDC4-209ENST00000562872 PROSER2Q86WR7 435 aaPredicted RBP16.81■□□□□ 0.28
KLHDC4-209ENST00000562872 CLTCL1P53675 1640 aa16.79■□□□□ 0.28
KLHDC4-209ENST00000562872 CHD2O14647 1828 aaKnown RBP16.79■□□□□ 0.28
KLHDC4-209ENST00000562872 HFM1A2PYH4 1435 aa16.78■□□□□ 0.28
KLHDC4-209ENST00000562872 TBX22Q9Y458 520 aa16.77■□□□□ 0.28
KLHDC4-209ENST00000562872 NRXN3Q9Y4C0 1643 aa16.77■□□□□ 0.27
KLHDC4-209ENST00000562872 TRPM2O94759 1503 aa16.76■□□□□ 0.27
KLHDC4-209ENST00000562872 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
KLHDC4-209ENST00000562872 PTPRUQ92729 1446 aa16.76■□□□□ 0.27
KLHDC4-209ENST00000562872 HDGFP51858 240 aaKnown RBP16.75■□□□□ 0.27
KLHDC4-209ENST00000562872 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
KLHDC4-209ENST00000562872 DIP2AQ14689 1571 aa16.75■□□□□ 0.27
KLHDC4-209ENST00000562872 ROBO1Q9Y6N7 1651 aa16.75■□□□□ 0.27
KLHDC4-209ENST00000562872 SOCS7O14512 581 aa16.73■□□□□ 0.27
KLHDC4-209ENST00000562872 NEXMIFQ5QGS0 1516 aa16.72■□□□□ 0.27
KLHDC4-209ENST00000562872 MSH6P52701 1360 aa16.72■□□□□ 0.27
KLHDC4-209ENST00000562872 SETBP1Q9Y6X0 1596 aa16.72■□□□□ 0.27
KLHDC4-209ENST00000562872 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
KLHDC4-209ENST00000562872 ZNF326Q5BKZ1 582 aaKnown RBP16.7■□□□□ 0.26
KLHDC4-209ENST00000562872 PIK3R4Q99570 1358 aa16.69■□□□□ 0.26
KLHDC4-209ENST00000562872 XRN1Q8IZH2 1706 aaKnown RBP16.69■□□□□ 0.26
KLHDC4-209ENST00000562872 METP08581 1390 aa16.68■□□□□ 0.26
KLHDC4-209ENST00000562872 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
KLHDC4-209ENST00000562872 FOXD1Q16676 465 aa16.67■□□□□ 0.26
KLHDC4-209ENST00000562872 SLAIN2Q9P270 581 aa16.67■□□□□ 0.26
KLHDC4-209ENST00000562872 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.67■□□□□ 0.26
KLHDC4-209ENST00000562872 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
KLHDC4-209ENST00000562872 NCOA3Q9Y6Q9 1424 aa16.65■□□□□ 0.26
KLHDC4-209ENST00000562872 KIF1BO60333 1816 aa16.65■□□□□ 0.26
KLHDC4-209ENST00000562872 C14orf37Q86TY3 774 aa16.64■□□□□ 0.25
KLHDC4-209ENST00000562872 SETD1AO15047 1707 aaKnown RBP16.62■□□□□ 0.25
KLHDC4-209ENST00000562872 PHLPP1O60346 1717 aa16.62■□□□□ 0.25
KLHDC4-209ENST00000562872 RGS17Q9UGC6 210 aaPredicted RBP16.62■□□□□ 0.25
KLHDC4-209ENST00000562872 COL16A1Q07092 1604 aaPredicted RBP16.62■□□□□ 0.25
KLHDC4-209ENST00000562872 C19orf44Q9H6X5 657 aa16.6■□□□□ 0.25
KLHDC4-209ENST00000562872 CADPS2Q86UW7 1296 aa16.58■□□□□ 0.24
KLHDC4-209ENST00000562872 NALCNQ8IZF0 1738 aa16.58■□□□□ 0.24
KLHDC4-209ENST00000562872 PPLO60437 1756 aa16.58■□□□□ 0.24
KLHDC4-209ENST00000562872 AHDC1Q5TGY3 1603 aaPredicted RBP16.57■□□□□ 0.24
KLHDC4-209ENST00000562872 ATF3P18847 181 aa16.57■□□□□ 0.24
KLHDC4-209ENST00000562872 MPHOSPH9Q99550 1183 aa16.57■□□□□ 0.24
KLHDC4-209ENST00000562872 MST1RQ04912 1400 aa16.56■□□□□ 0.24
KLHDC4-209ENST00000562872 BRINP3Q76B58 766 aa16.56■□□□□ 0.24
KLHDC4-209ENST00000562872 DCCP43146 1447 aa16.55■□□□□ 0.24
KLHDC4-209ENST00000562872 SPATA31E1Q6ZUB1 1445 aa16.55■□□□□ 0.24
KLHDC4-209ENST00000562872 ADGRL3Q9HAR2 1447 aa16.55■□□□□ 0.24
KLHDC4-209ENST00000562872 ROBO2Q9HCK4 1378 aa16.55■□□□□ 0.24
KLHDC4-209ENST00000562872 CCDC144AA2RUR9 1427 aa16.54■□□□□ 0.24
KLHDC4-209ENST00000562872 JCADQ9P266 1359 aa16.54■□□□□ 0.24
KLHDC4-209ENST00000562872 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
KLHDC4-209ENST00000562872 LRP6O75581 1613 aa16.54■□□□□ 0.24
KLHDC4-209ENST00000562872 ASXL1Q8IXJ9 1541 aa16.54■□□□□ 0.24
KLHDC4-209ENST00000562872 ADGRF5Q8IZF2 1346 aa16.53■□□□□ 0.24
KLHDC4-209ENST00000562872 PTCH1Q13635 1447 aa16.53■□□□□ 0.24
KLHDC4-209ENST00000562872 RPGRIP1LQ68CZ1 1315 aa16.52■□□□□ 0.24
KLHDC4-209ENST00000562872 RGL3Q3MIN7 710 aa16.52■□□□□ 0.24
KLHDC4-209ENST00000562872 POTEAQ6S8J7 498 aa16.52■□□□□ 0.24
KLHDC4-209ENST00000562872 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.23
KLHDC4-209ENST00000562872 IFT172Q9UG01 1749 aa16.51■□□□□ 0.23
KLHDC4-209ENST00000562872 DDX17Q92841 729 aaKnown RBP16.5■□□□□ 0.23
KLHDC4-209ENST00000562872 PRAG1Q86YV5 1406 aa16.5■□□□□ 0.23
KLHDC4-209ENST00000562872 RAB3GAP2Q9H2M9 1393 aa16.5■□□□□ 0.23
KLHDC4-209ENST00000562872 NHSL1Q5SYE7 1610 aa16.49■□□□□ 0.23
KLHDC4-209ENST00000562872 SHPRHQ149N8 1683 aa16.48■□□□□ 0.23
KLHDC4-209ENST00000562872 C1orf167Q5SNV9 1468 aa16.46■□□□□ 0.23
KLHDC4-209ENST00000562872 PIK3C2GO75747 1445 aa16.45■□□□□ 0.22
KLHDC4-209ENST00000562872 SPATA31A6Q5VVP1 1343 aa16.44■□□□□ 0.22
KLHDC4-209ENST00000562872 ANKRD30BQ9BXX2 1392 aa16.43■□□□□ 0.22
KLHDC4-209ENST00000562872 PLEKHH1Q9ULM0 1364 aa16.43■□□□□ 0.22
KLHDC4-209ENST00000562872 TMEM132EQ6IEE7 984 aa16.43■□□□□ 0.22
KLHDC4-209ENST00000562872 STK26Q9P289 416 aa16.43■□□□□ 0.22
KLHDC4-209ENST00000562872 ORAI2Q96SN7 254 aa16.42■□□□□ 0.22
KLHDC4-209ENST00000562872 NUTM2BA6NNL0 878 aaPredicted RBP16.41■□□□□ 0.22
KLHDC4-209ENST00000562872 NUTM2EB1AL46 878 aaPredicted RBP16.41■□□□□ 0.22
KLHDC4-209ENST00000562872 WAPLQ7Z5K2 1190 aa16.41■□□□□ 0.22
KLHDC4-209ENST00000562872 NUTM2AQ8IVF1 878 aaPredicted RBP16.41■□□□□ 0.22
KLHDC4-209ENST00000562872 TECPR2O15040 1411 aa16.41■□□□□ 0.22
KLHDC4-209ENST00000562872 LRPPRCP42704 1394 aaKnown RBP16.4■□□□□ 0.22
KLHDC4-209ENST00000562872 LAMC1P11047 1609 aa16.4■□□□□ 0.22
KLHDC4-209ENST00000562872 NRXN1Q9ULB1 1477 aa16.4■□□□□ 0.22
KLHDC4-209ENST00000562872 PNPLA6Q8IY17 1366 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms