RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 RRBP1Q9P2E9 1410 aaKnown RBP25.53■■□□□ 1.68
TNRC6A-209ENST00000562829 TMEM131LA2VDJ0 1609 aa25.52■■□□□ 1.68
TNRC6A-209ENST00000562829 PPP1R15AO75807 674 aaPredicted RBP25.52■■□□□ 1.68
TNRC6A-209ENST00000562829 RIMS2Q9UQ26 1411 aa25.51■■□□□ 1.67
TNRC6A-209ENST00000562829 ZFYVE9O95405 1425 aa25.5■■□□□ 1.67
TNRC6A-209ENST00000562829 HDGFP51858 240 aaKnown RBP25.5■■□□□ 1.67
TNRC6A-209ENST00000562829 XIRP1Q702N8 1843 aaKnown RBP25.49■■□□□ 1.67
TNRC6A-209ENST00000562829 KCNA6P17658 529 aa25.48■■□□□ 1.67
TNRC6A-209ENST00000562829 ILDR2Q71H61 639 aa25.48■■□□□ 1.67
TNRC6A-209ENST00000562829 PLEKHG1Q9ULL1 1385 aa25.46■■□□□ 1.67
TNRC6A-209ENST00000562829 TMEM94Q12767 1356 aa25.45■■□□□ 1.67
TNRC6A-209ENST00000562829 PROSER2Q86WR7 435 aaPredicted RBP25.44■■□□□ 1.66
TNRC6A-209ENST00000562829 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.44■■□□□ 1.66
TNRC6A-209ENST00000562829 NWD1Q149M9 1564 aa25.43■■□□□ 1.66
TNRC6A-209ENST00000562829 NUTM2DQ5VT03 806 aaPredicted RBP25.42■■□□□ 1.66
TNRC6A-209ENST00000562829 NKTRP30414 1462 aaKnown RBP25.41■■□□□ 1.66
TNRC6A-209ENST00000562829 SPHKAPQ2M3C7 1700 aa25.41■■□□□ 1.66
TNRC6A-209ENST00000562829 RBM33Q96EV2 1170 aaKnown RBP25.41■■□□□ 1.66
TNRC6A-209ENST00000562829 NAIPQ13075 1403 aa25.39■■□□□ 1.66
TNRC6A-209ENST00000562829 MED1Q15648 1581 aaPredicted RBP25.39■■□□□ 1.65
TNRC6A-209ENST00000562829 CHD2O14647 1828 aaKnown RBP25.35■■□□□ 1.65
TNRC6A-209ENST00000562829 TBX22Q9Y458 520 aa25.34■■□□□ 1.65
TNRC6A-209ENST00000562829 MSH6P52701 1360 aa25.32■■□□□ 1.64
TNRC6A-209ENST00000562829 DIP2AQ14689 1571 aa25.32■■□□□ 1.64
TNRC6A-209ENST00000562829 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
TNRC6A-209ENST00000562829 TRIM52Q96A61 297 aa25.32■■□□□ 1.64
TNRC6A-209ENST00000562829 ADAMTS13Q76LX8 1427 aa25.31■■□□□ 1.64
TNRC6A-209ENST00000562829 HFM1A2PYH4 1435 aa25.3■■□□□ 1.64
TNRC6A-209ENST00000562829 FAM135BQ49AJ0 1406 aa25.29■■□□□ 1.64
TNRC6A-209ENST00000562829 CLTCL1P53675 1640 aa25.28■■□□□ 1.64
TNRC6A-209ENST00000562829 SOCS7O14512 581 aa25.28■■□□□ 1.64
TNRC6A-209ENST00000562829 TRPM2O94759 1503 aa25.27■■□□□ 1.64
TNRC6A-209ENST00000562829 ROBO1Q9Y6N7 1651 aa25.27■■□□□ 1.64
TNRC6A-209ENST00000562829 C14orf37Q86TY3 774 aa25.27■■□□□ 1.64
TNRC6A-209ENST00000562829 PHF23Q9BUL5 403 aaPredicted RBP25.27■■□□□ 1.64
TNRC6A-209ENST00000562829 PIK3R4Q99570 1358 aa25.26■■□□□ 1.63
TNRC6A-209ENST00000562829 KIF1BO60333 1816 aa25.23■■□□□ 1.63
TNRC6A-209ENST00000562829 SLC4A1APQ9BWU0 796 aaKnown RBP25.22■■□□□ 1.63
TNRC6A-209ENST00000562829 NRXN3Q9Y4C0 1643 aa25.2■■□□□ 1.62
TNRC6A-209ENST00000562829 SETBP1Q9Y6X0 1596 aa25.2■■□□□ 1.62
TNRC6A-209ENST00000562829 AMOTL2Q9Y2J4 779 aa25.2■■□□□ 1.62
TNRC6A-209ENST00000562829 NCOA3Q9Y6Q9 1424 aa25.2■■□□□ 1.62
TNRC6A-209ENST00000562829 SLAIN2Q9P270 581 aa25.19■■□□□ 1.62
TNRC6A-209ENST00000562829 NEXMIFQ5QGS0 1516 aa25.18■■□□□ 1.62
TNRC6A-209ENST00000562829 PTPRUQ92729 1446 aa25.18■■□□□ 1.62
TNRC6A-209ENST00000562829 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.15■■□□□ 1.62
TNRC6A-209ENST00000562829 XRN1Q8IZH2 1706 aaKnown RBP25.13■■□□□ 1.61
TNRC6A-209ENST00000562829 ATF3P18847 181 aa25.13■■□□□ 1.61
TNRC6A-209ENST00000562829 C19orf44Q9H6X5 657 aa25.13■■□□□ 1.61
TNRC6A-209ENST00000562829 PHLPP1O60346 1717 aa25.12■■□□□ 1.61
TNRC6A-209ENST00000562829 CADPS2Q86UW7 1296 aa25.12■■□□□ 1.61
TNRC6A-209ENST00000562829 METP08581 1390 aa25.11■■□□□ 1.61
TNRC6A-209ENST00000562829 FOXD1Q16676 465 aa25.09■■□□□ 1.61
TNRC6A-209ENST00000562829 VGFO15240 615 aaPredicted RBP25.07■■□□□ 1.6
TNRC6A-209ENST00000562829 RPGRIP1LQ68CZ1 1315 aa25.04■■□□□ 1.6
TNRC6A-209ENST00000562829 JCADQ9P266 1359 aa25.03■■□□□ 1.6
TNRC6A-209ENST00000562829 CCDC144AA2RUR9 1427 aa25.03■■□□□ 1.6
TNRC6A-209ENST00000562829 DCCP43146 1447 aa25.03■■□□□ 1.6
TNRC6A-209ENST00000562829 COL16A1Q07092 1604 aaPredicted RBP25.02■■□□□ 1.6
TNRC6A-209ENST00000562829 MPHOSPH9Q99550 1183 aa25.02■■□□□ 1.6
TNRC6A-209ENST00000562829 PPLO60437 1756 aa25.02■■□□□ 1.6
TNRC6A-209ENST00000562829 SETD1AO15047 1707 aaKnown RBP24.99■■□□□ 1.59
TNRC6A-209ENST00000562829 AHDC1Q5TGY3 1603 aaPredicted RBP24.98■■□□□ 1.59
TNRC6A-209ENST00000562829 ADGRL3Q9HAR2 1447 aa24.98■■□□□ 1.59
TNRC6A-209ENST00000562829 BRINP3Q76B58 766 aa24.97■■□□□ 1.59
TNRC6A-209ENST00000562829 RGS17Q9UGC6 210 aaPredicted RBP24.97■■□□□ 1.59
TNRC6A-209ENST00000562829 NALCNQ8IZF0 1738 aa24.97■■□□□ 1.59
TNRC6A-209ENST00000562829 RGL3Q3MIN7 710 aa24.96■■□□□ 1.59
TNRC6A-209ENST00000562829 MST1RQ04912 1400 aa24.95■■□□□ 1.59
TNRC6A-209ENST00000562829 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.59
TNRC6A-209ENST00000562829 PTCH1Q13635 1447 aa24.95■■□□□ 1.58
TNRC6A-209ENST00000562829 ASXL1Q8IXJ9 1541 aa24.94■■□□□ 1.58
TNRC6A-209ENST00000562829 ACIN1Q9UKV3 1341 aaKnown RBP24.92■■□□□ 1.58
TNRC6A-209ENST00000562829 ROBO2Q9HCK4 1378 aa24.92■■□□□ 1.58
TNRC6A-209ENST00000562829 SPATA31E1Q6ZUB1 1445 aa24.9■■□□□ 1.58
TNRC6A-209ENST00000562829 SPATA31A6Q5VVP1 1343 aa24.89■■□□□ 1.58
TNRC6A-209ENST00000562829 ADGRF5Q8IZF2 1346 aa24.89■■□□□ 1.58
TNRC6A-209ENST00000562829 SHPRHQ149N8 1683 aa24.88■■□□□ 1.57
TNRC6A-209ENST00000562829 MEX3CQ5U5Q3 659 aaKnown RBP24.88■■□□□ 1.57
TNRC6A-209ENST00000562829 IFT172Q9UG01 1749 aa24.88■■□□□ 1.57
TNRC6A-209ENST00000562829 ANKRD30BQ9BXX2 1392 aa24.88■■□□□ 1.57
TNRC6A-209ENST00000562829 POTEAQ6S8J7 498 aa24.87■■□□□ 1.57
TNRC6A-209ENST00000562829 RAB3GAP2Q9H2M9 1393 aa24.87■■□□□ 1.57
TNRC6A-209ENST00000562829 NHSL1Q5SYE7 1610 aa24.86■■□□□ 1.57
TNRC6A-209ENST00000562829 LRP6O75581 1613 aa24.86■■□□□ 1.57
TNRC6A-209ENST00000562829 PRAG1Q86YV5 1406 aa24.86■■□□□ 1.57
TNRC6A-209ENST00000562829 C1orf167Q5SNV9 1468 aa24.83■■□□□ 1.56
TNRC6A-209ENST00000562829 NUTM2BA6NNL0 878 aaPredicted RBP24.82■■□□□ 1.56
TNRC6A-209ENST00000562829 NUTM2EB1AL46 878 aaPredicted RBP24.82■■□□□ 1.56
TNRC6A-209ENST00000562829 NUTM2AQ8IVF1 878 aaPredicted RBP24.82■■□□□ 1.56
TNRC6A-209ENST00000562829 DDX17Q92841 729 aaKnown RBP24.82■■□□□ 1.56
TNRC6A-209ENST00000562829 STK26Q9P289 416 aa24.82■■□□□ 1.56
TNRC6A-209ENST00000562829 PIK3C2GO75747 1445 aa24.79■■□□□ 1.56
TNRC6A-209ENST00000562829 LRRC59Q96AG4 307 aaKnown RBP24.79■■□□□ 1.56
TNRC6A-209ENST00000562829 TMEM132EQ6IEE7 984 aa24.77■■□□□ 1.56
TNRC6A-209ENST00000562829 LRPPRCP42704 1394 aaKnown RBP24.77■■□□□ 1.56
TNRC6A-209ENST00000562829 ORAI2Q96SN7 254 aa24.76■■□□□ 1.55
TNRC6A-209ENST00000562829 ZNF772Q68DY9 489 aaPredicted RBP24.74■■□□□ 1.55
TNRC6A-209ENST00000562829 TECPR2O15040 1411 aa24.74■■□□□ 1.55
TNRC6A-209ENST00000562829 CDC42BPGQ6DT37 1551 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms