RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 MYO3AQ8NEV4 1616 aa19.8■□□□□ 0.76
CLK3-209ENST00000562670 PIK3C2GO75747 1445 aa19.79■□□□□ 0.76
CLK3-209ENST00000562670 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
CLK3-209ENST00000562670 KDM2AQ9Y2K7 1162 aa19.77■□□□□ 0.76
CLK3-209ENST00000562670 SETBP1Q9Y6X0 1596 aa19.77■□□□□ 0.76
CLK3-209ENST00000562670 ZNF142P52746 1687 aaPredicted RBP19.77■□□□□ 0.76
CLK3-209ENST00000562670 ROCK2O75116 1388 aaKnown RBP19.75■□□□□ 0.75
CLK3-209ENST00000562670 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
CLK3-209ENST00000562670 ZNF326Q5BKZ1 582 aaKnown RBP19.75■□□□□ 0.75
CLK3-209ENST00000562670 PTPRMP28827 1452 aa19.73■□□□□ 0.75
CLK3-209ENST00000562670 VGFO15240 615 aaPredicted RBP19.73■□□□□ 0.75
CLK3-209ENST00000562670 EIF4G2P78344 907 aaKnown RBP eCLIP19.72■□□□□ 0.75
CLK3-209ENST00000562670 CEP170BQ9Y4F5 1589 aaPredicted RBP19.72■□□□□ 0.75
CLK3-209ENST00000562670 ADGRF5Q8IZF2 1346 aa19.72■□□□□ 0.75
CLK3-209ENST00000562670 IQGAP1P46940 1657 aa19.71■□□□□ 0.75
CLK3-209ENST00000562670 SLIT1O75093 1534 aa19.71■□□□□ 0.75
CLK3-209ENST00000562670 USP47Q96K76 1375 aa19.71■□□□□ 0.75
CLK3-209ENST00000562670 RIMS2Q9UQ26 1411 aa19.71■□□□□ 0.75
CLK3-209ENST00000562670 CEBPAP49715 358 aaPredicted RBP19.71■□□□□ 0.75
CLK3-209ENST00000562670 ARHGAP23Q9P227 1491 aa19.71■□□□□ 0.75
CLK3-209ENST00000562670 STAG3Q9UJ98 1225 aa19.7■□□□□ 0.74
CLK3-209ENST00000562670 TMEM2Q9UHN6 1383 aa19.7■□□□□ 0.74
CLK3-209ENST00000562670 ADGRB1O14514 1584 aa19.69■□□□□ 0.74
CLK3-209ENST00000562670 CARD11Q9BXL7 1154 aa19.68■□□□□ 0.74
CLK3-209ENST00000562670 SETD1BQ9UPS6 1966 aaKnown RBP19.68■□□□□ 0.74
CLK3-209ENST00000562670 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.67■□□□□ 0.74
CLK3-209ENST00000562670 SCAF11Q99590 1463 aaKnown RBP19.67■□□□□ 0.74
CLK3-209ENST00000562670 HSPA5P11021 654 aaKnown RBP19.66■□□□□ 0.74
CLK3-209ENST00000562670 POLR1AO95602 1720 aaPredicted RBP19.65■□□□□ 0.74
CLK3-209ENST00000562670 C14orf93Q9H972 538 aaKnown RBP19.65■□□□□ 0.74
CLK3-209ENST00000562670 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.73
CLK3-209ENST00000562670 SETD1AO15047 1707 aaKnown RBP19.63■□□□□ 0.73
CLK3-209ENST00000562670 NRXN3Q9Y4C0 1643 aa19.63■□□□□ 0.73
CLK3-209ENST00000562670 NBPF1Q3BBV0 1214 aa19.63■□□□□ 0.73
CLK3-209ENST00000562670 ALKQ9UM73 1620 aa19.62■□□□□ 0.73
CLK3-209ENST00000562670 ASXL1Q8IXJ9 1541 aa19.61■□□□□ 0.73
CLK3-209ENST00000562670 EIF3AQ14152 1382 aaKnown RBP19.61■□□□□ 0.73
CLK3-209ENST00000562670 CFAP70Q5T0N1 1121 aa19.6■□□□□ 0.73
CLK3-209ENST00000562670 THEMISQ8N1K5 641 aaPredicted RBP19.6■□□□□ 0.73
CLK3-209ENST00000562670 PLEKHG1Q9ULL1 1385 aa19.59■□□□□ 0.73
CLK3-209ENST00000562670 DIP2AQ14689 1571 aa19.58■□□□□ 0.73
CLK3-209ENST00000562670 SBNO2Q9Y2G9 1366 aa19.57■□□□□ 0.72
CLK3-209ENST00000562670 MED14O60244 1454 aa19.54■□□□□ 0.72
CLK3-209ENST00000562670 ARHGEF28Q8N1W1 1705 aaKnown RBP19.54■□□□□ 0.72
CLK3-209ENST00000562670 DLC1Q96QB1 1528 aa19.53■□□□□ 0.72
CLK3-209ENST00000562670 EID1Q9Y6B2 187 aa19.53■□□□□ 0.72
CLK3-209ENST00000562670 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.72
CLK3-209ENST00000562670 KNDC1Q76NI1 1749 aa19.52■□□□□ 0.72
CLK3-209ENST00000562670 ST20-MTHFSA0A0A6YYL1 179 aa19.52■□□□□ 0.72
CLK3-209ENST00000562670 NUTM2DQ5VT03 806 aaPredicted RBP19.52■□□□□ 0.72
CLK3-209ENST00000562670 SLC24A1O60721 1099 aa19.51■□□□□ 0.71
CLK3-209ENST00000562670 CCDC7Q96M83 1385 aa19.51■□□□□ 0.71
CLK3-209ENST00000562670 YTHDC2Q9H6S0 1430 aaKnown RBP19.51■□□□□ 0.71
CLK3-209ENST00000562670 KDM4FA0A1W2PPD8 638 aa19.5■□□□□ 0.71
CLK3-209ENST00000562670 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
CLK3-209ENST00000562670 TESK2Q96S53 571 aa19.5■□□□□ 0.71
CLK3-209ENST00000562670 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
CLK3-209ENST00000562670 TECPR2O15040 1411 aa19.5■□□□□ 0.71
CLK3-209ENST00000562670 WASHC2AQ641Q2 1341 aa19.5■□□□□ 0.71
CLK3-209ENST00000562670 LTKP29376 864 aa19.49■□□□□ 0.71
CLK3-209ENST00000562670 LRPPRCP42704 1394 aaKnown RBP19.48■□□□□ 0.71
CLK3-209ENST00000562670 TXNDC2Q86VQ3 553 aa19.48■□□□□ 0.71
CLK3-209ENST00000562670 CPS1P31327 1500 aa19.47■□□□□ 0.71
CLK3-209ENST00000562670 QRICH2Q9H0J4 1663 aa19.47■□□□□ 0.71
CLK3-209ENST00000562670 KIF7Q2M1P5 1343 aa19.47■□□□□ 0.71
CLK3-209ENST00000562670 ABCC11Q96J66 1382 aa19.46■□□□□ 0.71
CLK3-209ENST00000562670 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
CLK3-209ENST00000562670 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
CLK3-209ENST00000562670 CENPJQ9HC77 1338 aaPredicted RBP19.44■□□□□ 0.7
CLK3-209ENST00000562670 C11orf95C9JLR9 678 aaPredicted RBP19.43■□□□□ 0.7
CLK3-209ENST00000562670 TMEM132EQ6IEE7 984 aa19.43■□□□□ 0.7
CLK3-209ENST00000562670 METP08581 1390 aa19.43■□□□□ 0.7
CLK3-209ENST00000562670 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
CLK3-209ENST00000562670 TMF1P82094 1093 aa19.42■□□□□ 0.7
CLK3-209ENST00000562670 ANKLE2Q86XL3 938 aa19.42■□□□□ 0.7
CLK3-209ENST00000562670 TBX22Q9Y458 520 aa19.42■□□□□ 0.7
CLK3-209ENST00000562670 SIRT1Q96EB6 747 aa19.41■□□□□ 0.7
CLK3-209ENST00000562670 DISP3Q9P2K9 1392 aa19.41■□□□□ 0.7
CLK3-209ENST00000562670 XRN1Q8IZH2 1706 aaKnown RBP19.4■□□□□ 0.7
CLK3-209ENST00000562670 CDCA8Q53HL2 280 aa19.4■□□□□ 0.7
CLK3-209ENST00000562670 TRAK1Q9UPV9 953 aa19.4■□□□□ 0.7
CLK3-209ENST00000562670 PTCH1Q13635 1447 aa19.4■□□□□ 0.7
CLK3-209ENST00000562670 LMTK3Q96Q04 1460 aa19.4■□□□□ 0.7
CLK3-209ENST00000562670 NPHP4O75161 1426 aaPredicted RBP19.38■□□□□ 0.69
CLK3-209ENST00000562670 PUS7Q96PZ0 661 aaKnown RBP19.36■□□□□ 0.69
CLK3-209ENST00000562670 TULP4Q9NRJ4 1543 aa19.35■□□□□ 0.69
CLK3-209ENST00000562670 DDX10Q13206 875 aaKnown RBP19.34■□□□□ 0.69
CLK3-209ENST00000562670 ADGRB2O60241 1585 aa19.34■□□□□ 0.69
CLK3-209ENST00000562670 PTPRUQ92729 1446 aa19.34■□□□□ 0.69
CLK3-209ENST00000562670 MYOM1P52179 1685 aa19.33■□□□□ 0.69
CLK3-209ENST00000562670 NWD1Q149M9 1564 aa19.33■□□□□ 0.69
CLK3-209ENST00000562670 BCANQ96GW7 911 aa19.33■□□□□ 0.68
CLK3-209ENST00000562670 CHD2O14647 1828 aaKnown RBP19.31■□□□□ 0.68
CLK3-209ENST00000562670 PRAM1Q96QH2 718 aa19.31■□□□□ 0.68
CLK3-209ENST00000562670 STK26Q9P289 416 aa19.31■□□□□ 0.68
CLK3-209ENST00000562670 SLC26A8Q96RN1 970 aa19.3■□□□□ 0.68
CLK3-209ENST00000562670 EVC2Q86UK5 1308 aa19.29■□□□□ 0.68
CLK3-209ENST00000562670 ROBO2Q9HCK4 1378 aa19.29■□□□□ 0.68
CLK3-209ENST00000562670 POGKQ9P215 609 aa19.28■□□□□ 0.68
CLK3-209ENST00000562670 NINLQ9Y2I6 1382 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms