RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 HDGFP51858 240 aaKnown RBP24.34■■□□□ 1.49
PKD1-226ENST00000562425 MPHOSPH9Q99550 1183 aa24.34■■□□□ 1.49
PKD1-226ENST00000562425 ADGRB3O60242 1522 aa24.33■■□□□ 1.49
PKD1-226ENST00000562425 SLIT1O75093 1534 aa24.33■■□□□ 1.49
PKD1-226ENST00000562425 ARHGAP23Q9P227 1491 aa24.32■■□□□ 1.48
PKD1-226ENST00000562425 SCAF11Q99590 1463 aaKnown RBP24.31■■□□□ 1.48
PKD1-226ENST00000562425 LTKP29376 864 aa24.3■■□□□ 1.48
PKD1-226ENST00000562425 ALKQ9UM73 1620 aa24.3■■□□□ 1.48
PKD1-226ENST00000562425 SPHKAPQ2M3C7 1700 aa24.29■■□□□ 1.48
PKD1-226ENST00000562425 LRRC7Q96NW7 1537 aa24.29■■□□□ 1.48
PKD1-226ENST00000562425 STRCP1A6NGW2 1772 aa24.29■■□□□ 1.48
PKD1-226ENST00000562425 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.26■■□□□ 1.47
PKD1-226ENST00000562425 TRPM2O94759 1503 aa24.25■■□□□ 1.47
PKD1-226ENST00000562425 TMEM131LA2VDJ0 1609 aa24.25■■□□□ 1.47
PKD1-226ENST00000562425 PPP1R15AO75807 674 aaPredicted RBP24.23■■□□□ 1.47
PKD1-226ENST00000562425 FOXD1Q16676 465 aa24.23■■□□□ 1.47
PKD1-226ENST00000562425 RIMS2Q9UQ26 1411 aa24.22■■□□□ 1.47
PKD1-226ENST00000562425 ZNF326Q5BKZ1 582 aaKnown RBP24.2■■□□□ 1.46
PKD1-226ENST00000562425 BCANQ96GW7 911 aa24.2■■□□□ 1.46
PKD1-226ENST00000562425 ZFYVE9O95405 1425 aa24.18■■□□□ 1.46
PKD1-226ENST00000562425 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
PKD1-226ENST00000562425 CLTCL1P53675 1640 aa24.17■■□□□ 1.46
PKD1-226ENST00000562425 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
PKD1-226ENST00000562425 CCDC144AA2RUR9 1427 aa24.17■■□□□ 1.46
PKD1-226ENST00000562425 MYO5BQ9ULV0 1848 aa24.15■■□□□ 1.46
PKD1-226ENST00000562425 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
PKD1-226ENST00000562425 NUTM2DQ5VT03 806 aaPredicted RBP24.12■■□□□ 1.45
PKD1-226ENST00000562425 KIF1BO60333 1816 aa24.12■■□□□ 1.45
PKD1-226ENST00000562425 RPGRIP1LQ68CZ1 1315 aa24.11■■□□□ 1.45
PKD1-226ENST00000562425 SLC26A8Q96RN1 970 aa24.11■■□□□ 1.45
PKD1-226ENST00000562425 XIRP1Q702N8 1843 aaKnown RBP24.11■■□□□ 1.45
PKD1-226ENST00000562425 VGFO15240 615 aaPredicted RBP24.07■■□□□ 1.44
PKD1-226ENST00000562425 TBX22Q9Y458 520 aa24.07■■□□□ 1.44
PKD1-226ENST00000562425 SENP3Q9H4L4 574 aaPredicted RBP24.06■■□□□ 1.44
PKD1-226ENST00000562425 FAM135BQ49AJ0 1406 aa24.05■■□□□ 1.44
PKD1-226ENST00000562425 KCNA6P17658 529 aa24.04■■□□□ 1.44
PKD1-226ENST00000562425 ANKRD30BQ9BXX2 1392 aa24.03■■□□□ 1.44
PKD1-226ENST00000562425 RGL3Q3MIN7 710 aa24.03■■□□□ 1.44
PKD1-226ENST00000562425 NEXMIFQ5QGS0 1516 aa24.01■■□□□ 1.43
PKD1-226ENST00000562425 SPATA31E1Q6ZUB1 1445 aa24.01■■□□□ 1.43
PKD1-226ENST00000562425 TMEM94Q12767 1356 aa24■■□□□ 1.43
PKD1-226ENST00000562425 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
PKD1-226ENST00000562425 ADAMTS13Q76LX8 1427 aa23.99■■□□□ 1.43
PKD1-226ENST00000562425 PIK3R4Q99570 1358 aa23.98■■□□□ 1.43
PKD1-226ENST00000562425 DIP2AQ14689 1571 aa23.98■■□□□ 1.43
PKD1-226ENST00000562425 NWD1Q149M9 1564 aa23.98■■□□□ 1.43
PKD1-226ENST00000562425 SETBP1Q9Y6X0 1596 aa23.95■■□□□ 1.42
PKD1-226ENST00000562425 PROSER2Q86WR7 435 aaPredicted RBP23.94■■□□□ 1.42
PKD1-226ENST00000562425 ROBO1Q9Y6N7 1651 aa23.92■■□□□ 1.42
PKD1-226ENST00000562425 PPLO60437 1756 aa23.9■■□□□ 1.42
PKD1-226ENST00000562425 RGS17Q9UGC6 210 aaPredicted RBP23.89■■□□□ 1.41
PKD1-226ENST00000562425 AMOTL2Q9Y2J4 779 aa23.89■■□□□ 1.41
PKD1-226ENST00000562425 MSH6P52701 1360 aa23.89■■□□□ 1.41
PKD1-226ENST00000562425 NRXN3Q9Y4C0 1643 aa23.88■■□□□ 1.41
PKD1-226ENST00000562425 ADGRF5Q8IZF2 1346 aa23.87■■□□□ 1.41
PKD1-226ENST00000562425 CHD2O14647 1828 aaKnown RBP23.87■■□□□ 1.41
PKD1-226ENST00000562425 STAC3Q96MF2 364 aa23.87■■□□□ 1.41
PKD1-226ENST00000562425 METP08581 1390 aa23.85■■□□□ 1.41
PKD1-226ENST00000562425 NCOA3Q9Y6Q9 1424 aa23.84■■□□□ 1.41
PKD1-226ENST00000562425 DCAF11Q8TEB1 546 aa23.82■■□□□ 1.4
PKD1-226ENST00000562425 PTPRUQ92729 1446 aa23.82■■□□□ 1.4
PKD1-226ENST00000562425 IFT172Q9UG01 1749 aa23.81■■□□□ 1.4
PKD1-226ENST00000562425 SLAIN2Q9P270 581 aa23.81■■□□□ 1.4
PKD1-226ENST00000562425 MYOM2P54296 1465 aa23.81■■□□□ 1.4
PKD1-226ENST00000562425 DHX57Q6P158 1386 aaKnown RBP23.8■■□□□ 1.4
PKD1-226ENST00000562425 C14orf37Q86TY3 774 aa23.8■■□□□ 1.4
PKD1-226ENST00000562425 RBM33Q96EV2 1170 aaKnown RBP23.8■■□□□ 1.4
PKD1-226ENST00000562425 PHLPP1O60346 1717 aa23.79■■□□□ 1.4
PKD1-226ENST00000562425 PIK3C2GO75747 1445 aa23.79■■□□□ 1.4
PKD1-226ENST00000562425 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
PKD1-226ENST00000562425 JCADQ9P266 1359 aa23.78■■□□□ 1.4
PKD1-226ENST00000562425 PCGF6Q9BYE7 350 aa23.77■■□□□ 1.4
PKD1-226ENST00000562425 C14orf93Q9H972 538 aaKnown RBP23.77■■□□□ 1.4
PKD1-226ENST00000562425 NRXN1Q9ULB1 1477 aa23.76■■□□□ 1.39
PKD1-226ENST00000562425 XRN1Q8IZH2 1706 aaKnown RBP23.74■■□□□ 1.39
PKD1-226ENST00000562425 POTEAQ6S8J7 498 aa23.74■■□□□ 1.39
PKD1-226ENST00000562425 C19orf44Q9H6X5 657 aa23.74■■□□□ 1.39
PKD1-226ENST00000562425 CFAP70Q5T0N1 1121 aa23.72■■□□□ 1.39
PKD1-226ENST00000562425 SIN3AQ96ST3 1273 aa23.72■■□□□ 1.39
PKD1-226ENST00000562425 SETD1AO15047 1707 aaKnown RBP23.72■■□□□ 1.39
PKD1-226ENST00000562425 COL16A1Q07092 1604 aaPredicted RBP23.71■■□□□ 1.39
PKD1-226ENST00000562425 NEUROD1Q13562 356 aa23.71■■□□□ 1.39
PKD1-226ENST00000562425 PTCH1Q13635 1447 aa23.7■■□□□ 1.38
PKD1-226ENST00000562425 ATF3P18847 181 aa23.7■■□□□ 1.38
PKD1-226ENST00000562425 TMEM132EQ6IEE7 984 aa23.7■■□□□ 1.38
PKD1-226ENST00000562425 PRAG1Q86YV5 1406 aa23.69■■□□□ 1.38
PKD1-226ENST00000562425 LRPPRCP42704 1394 aaKnown RBP23.69■■□□□ 1.38
PKD1-226ENST00000562425 CADPS2Q86UW7 1296 aa23.69■■□□□ 1.38
PKD1-226ENST00000562425 STK26Q9P289 416 aa23.69■■□□□ 1.38
PKD1-226ENST00000562425 LAMC1P11047 1609 aa23.68■■□□□ 1.38
PKD1-226ENST00000562425 ABCC11Q96J66 1382 aa23.67■■□□□ 1.38
PKD1-226ENST00000562425 AHDC1Q5TGY3 1603 aaPredicted RBP23.67■■□□□ 1.38
PKD1-226ENST00000562425 SPATA31A6Q5VVP1 1343 aa23.67■■□□□ 1.38
PKD1-226ENST00000562425 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.67■■□□□ 1.38
PKD1-226ENST00000562425 ROBO2Q9HCK4 1378 aa23.66■■□□□ 1.38
PKD1-226ENST00000562425 YTHDC2Q9H6S0 1430 aaKnown RBP23.66■■□□□ 1.38
PKD1-226ENST00000562425 L3MBTL2Q969R5 705 aa23.64■■□□□ 1.37
PKD1-226ENST00000562425 SIRT1Q96EB6 747 aa23.64■■□□□ 1.37
PKD1-226ENST00000562425 TECPR2O15040 1411 aa23.64■■□□□ 1.37
PKD1-226ENST00000562425 DCCP43146 1447 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms