RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 RUFY2Q8WXA3 655 aa13.8□□□□□ -0.2
RPAP1-204ENST00000562303 IFIT2P09913 472 aaKnown RBP13.8□□□□□ -0.2
RPAP1-204ENST00000562303 CCDC43Q96MW1 224 aaKnown RBP13.8□□□□□ -0.2
RPAP1-204ENST00000562303 UACAQ9BZF9 1416 aa13.79□□□□□ -0.2
RPAP1-204ENST00000562303 ZKSCAN2Q63HK3 967 aa13.79□□□□□ -0.2
RPAP1-204ENST00000562303 CCDC18Q5T9S5 1454 aa13.79□□□□□ -0.2
RPAP1-204ENST00000562303 CYB5RLQ6IPT4 315 aa13.79□□□□□ -0.2
RPAP1-204ENST00000562303 KIF15Q9NS87 1388 aa13.79□□□□□ -0.2
RPAP1-204ENST00000562303 CPLX1O14810 134 aa13.79□□□□□ -0.2
RPAP1-204ENST00000562303 DDX58O95786 925 aaKnown RBP13.79□□□□□ -0.2
RPAP1-204ENST00000562303 RBM33Q96EV2 1170 aaKnown RBP13.78□□□□□ -0.2
RPAP1-204ENST00000562303 CCDC144AA2RUR9 1427 aa13.78□□□□□ -0.2
RPAP1-204ENST00000562303 CCDC70Q6NSX1 233 aa13.78□□□□□ -0.2
RPAP1-204ENST00000562303 TRDNQ13061 729 aa13.78□□□□□ -0.2
RPAP1-204ENST00000562303 DDX11L8A8MPP1 907 aa13.77□□□□□ -0.2
RPAP1-204ENST00000562303 ZKSCAN1P17029 563 aaPredicted RBP13.77□□□□□ -0.2
RPAP1-204ENST00000562303 JPH4Q96JJ6 628 aa13.77□□□□□ -0.2
RPAP1-204ENST00000562303 ANO2Q9NQ90 1003 aa13.77□□□□□ -0.2
RPAP1-204ENST00000562303 MYBBP1AQ9BQG0 1328 aaKnown RBP13.77□□□□□ -0.21
RPAP1-204ENST00000562303 NFXL1Q6ZNB6 911 aa13.77□□□□□ -0.21
RPAP1-204ENST00000562303 IPO9Q96P70 1041 aaKnown RBP13.77□□□□□ -0.21
RPAP1-204ENST00000562303 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
RPAP1-204ENST00000562303 ERICH2A1L162 156 aa13.76□□□□□ -0.21
RPAP1-204ENST00000562303 IPO7O95373 1038 aaKnown RBP13.76□□□□□ -0.21
RPAP1-204ENST00000562303 G3BP1Q13283 466 aaKnown RBP eCLIP13.76□□□□□ -0.211e-6■■■■□ 19.3
RPAP1-204ENST00000562303 ANKRD20A12PQ8NF67 263 aa13.76□□□□□ -0.21
RPAP1-204ENST00000562303 DCAF8L1A6NGE4 600 aa13.75□□□□□ -0.21
RPAP1-204ENST00000562303 E9PSI1 815 aa13.75□□□□□ -0.21
RPAP1-204ENST00000562303 DDX49Q9Y6V7 483 aaKnown RBP13.75□□□□□ -0.21
RPAP1-204ENST00000562303 FHOD3Q2V2M9 1422 aa13.74□□□□□ -0.21
RPAP1-204ENST00000562303 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
RPAP1-204ENST00000562303 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
RPAP1-204ENST00000562303 ATF3P18847 181 aa13.73□□□□□ -0.21
RPAP1-204ENST00000562303 FKBP5Q13451 457 aaPredicted RBP13.73□□□□□ -0.21
RPAP1-204ENST00000562303 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
RPAP1-204ENST00000562303 RAPGEF4Q8WZA2 1011 aa13.73□□□□□ -0.21
RPAP1-204ENST00000562303 HOOK1Q9UJC3 728 aaKnown RBP13.72□□□□□ -0.21
RPAP1-204ENST00000562303 RNF20Q5VTR2 975 aa13.72□□□□□ -0.21
RPAP1-204ENST00000562303 REC8O95072 547 aa13.72□□□□□ -0.21
RPAP1-204ENST00000562303 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
RPAP1-204ENST00000562303 COG6Q9Y2V7 657 aa13.71□□□□□ -0.21
RPAP1-204ENST00000562303 FYB1O15117 783 aa13.71□□□□□ -0.21
RPAP1-204ENST00000562303 SETQ01105 290 aaPredicted RBP13.71□□□□□ -0.21
RPAP1-204ENST00000562303 PLIN1O60240 522 aa13.71□□□□□ -0.21
RPAP1-204ENST00000562303 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
RPAP1-204ENST00000562303 RIPK4P57078 832 aa13.7□□□□□ -0.22
RPAP1-204ENST00000562303 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
RPAP1-204ENST00000562303 BICD2Q8TD16 824 aa13.7□□□□□ -0.22
RPAP1-204ENST00000562303 R3HCC1Q9Y3T6 440 aaKnown RBP13.7□□□□□ -0.22
RPAP1-204ENST00000562303 GPS2Q13227 327 aa13.7□□□□□ -0.22
RPAP1-204ENST00000562303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.7□□□□□ -0.229e-10■■■■■ 115.4
RPAP1-204ENST00000562303 ZNF592Q92610 1267 aa13.69□□□□□ -0.22
RPAP1-204ENST00000562303 FAM161AQ3B820 660 aa13.69□□□□□ -0.22
RPAP1-204ENST00000562303 ABCC8Q09428 1581 aa13.69□□□□□ -0.22
RPAP1-204ENST00000562303 SKOR2Q2VWA4 1001 aaPredicted RBP13.69□□□□□ -0.22
RPAP1-204ENST00000562303 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.69□□□□□ -0.22
RPAP1-204ENST00000562303 NEUROD6Q96NK8 337 aa13.69□□□□□ -0.22
RPAP1-204ENST00000562303 NLRP2Q9NX02 1062 aa13.69□□□□□ -0.22
RPAP1-204ENST00000562303 CCDC88BA6NC98 1476 aa13.69□□□□□ -0.22
RPAP1-204ENST00000562303 RIC3Q7Z5B4 369 aa13.69□□□□□ -0.22
RPAP1-204ENST00000562303 DDX19BQ9UMR2 479 aa13.69□□□□□ -0.22
RPAP1-204ENST00000562303 CT47A1Q5JQC4 288 aaPredicted RBP13.68□□□□□ -0.22
RPAP1-204ENST00000562303 TSPYL4Q9UJ04 414 aa13.68□□□□□ -0.22
RPAP1-204ENST00000562303 SAFBQ15424 915 aaKnown RBP eCLIP13.68□□□□□ -0.22
RPAP1-204ENST00000562303 FOSBP53539 338 aa13.68□□□□□ -0.22
RPAP1-204ENST00000562303 AIMP1Q12904 312 aaKnown RBP13.68□□□□□ -0.22
RPAP1-204ENST00000562303 APAF1O14727 1248 aa13.68□□□□□ -0.22
RPAP1-204ENST00000562303 WASHC4Q2M389 1173 aa13.67□□□□□ -0.22
RPAP1-204ENST00000562303 ROCK1Q13464 1354 aa13.67□□□□□ -0.22
RPAP1-204ENST00000562303 SMARCA2P51531 1590 aa13.67□□□□□ -0.22
RPAP1-204ENST00000562303 ODF2Q5BJF6 829 aa13.67□□□□□ -0.22
RPAP1-204ENST00000562303 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
RPAP1-204ENST00000562303 RAPGEF2Q9Y4G8 1499 aa13.66□□□□□ -0.22
RPAP1-204ENST00000562303 PTPRGP23470 1445 aa13.66□□□□□ -0.22
RPAP1-204ENST00000562303 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
RPAP1-204ENST00000562303 HSP90AB4PQ58FF6 505 aa13.66□□□□□ -0.22
RPAP1-204ENST00000562303 RALYLQ86SE5 291 aaKnown RBP13.66□□□□□ -0.22
RPAP1-204ENST00000562303 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
RPAP1-204ENST00000562303 VPS37CA5D8V6 355 aaPredicted RBP13.66□□□□□ -0.22
RPAP1-204ENST00000562303 NAP1L1P55209 391 aaKnown RBP13.66□□□□□ -0.22
RPAP1-204ENST00000562303 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
RPAP1-204ENST00000562303 ERC2O15083 957 aa13.65□□□□□ -0.22
RPAP1-204ENST00000562303 SLC4A3P48751 1232 aa13.65□□□□□ -0.22
RPAP1-204ENST00000562303 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
RPAP1-204ENST00000562303 NUTM2GQ5VZR2 741 aa13.65□□□□□ -0.22
RPAP1-204ENST00000562303 HOMER1Q86YM7 354 aa13.65□□□□□ -0.22
RPAP1-204ENST00000562303 WASHC2AQ641Q2 1341 aa13.65□□□□□ -0.23
RPAP1-204ENST00000562303 FAM69CQ0P6D2 419 aa13.64□□□□□ -0.23
RPAP1-204ENST00000562303 EXOC6Q8TAG9 804 aa13.64□□□□□ -0.23
RPAP1-204ENST00000562303 SMC3Q9UQE7 1217 aa13.64□□□□□ -0.23
RPAP1-204ENST00000562303 RRP1P56182 461 aaKnown RBP13.63□□□□□ -0.23
RPAP1-204ENST00000562303 BRMS1Q9HCU9 246 aa13.63□□□□□ -0.23
RPAP1-204ENST00000562303 HMOX1P09601 288 aa13.63□□□□□ -0.23
RPAP1-204ENST00000562303 PDE4AP27815 886 aa13.63□□□□□ -0.23
RPAP1-204ENST00000562303 FAM177BA6PVY3 158 aa13.63□□□□□ -0.23
RPAP1-204ENST00000562303 CCAR1Q8IX12 1150 aaKnown RBP13.63□□□□□ -0.23
RPAP1-204ENST00000562303 GNAI1P63096 354 aa13.62□□□□□ -0.23
RPAP1-204ENST00000562303 ZFYVE27Q5T4F4 411 aa13.62□□□□□ -0.23
RPAP1-204ENST00000562303 TMEM132AQ24JP5 1023 aa13.62□□□□□ -0.23
RPAP1-204ENST00000562303 EPS15P42566 896 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms