RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 DIP2BQ9P265 1576 aa13.37□□□□□ -0.27
SMG1-205ENST00000561947 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
SMG1-205ENST00000561947 NRXN1Q9ULB1 1477 aa13.36□□□□□ -0.27
SMG1-205ENST00000561947 ZC3H13Q5T200 1668 aaKnown RBP13.36□□□□□ -0.27
SMG1-205ENST00000561947 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
SMG1-205ENST00000561947 PPLO60437 1756 aa13.35□□□□□ -0.27
SMG1-205ENST00000561947 PARD3Q8TEW0 1356 aa13.35□□□□□ -0.27
SMG1-205ENST00000561947 SIGLEC1Q9BZZ2 1709 aa13.35□□□□□ -0.27
SMG1-205ENST00000561947 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
SMG1-205ENST00000561947 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
SMG1-205ENST00000561947 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
SMG1-205ENST00000561947 ZMYM4Q5VZL5 1548 aa13.34□□□□□ -0.27
SMG1-205ENST00000561947 TMC1Q8TDI8 760 aa13.34□□□□□ -0.27
SMG1-205ENST00000561947 ADGRF5Q8IZF2 1346 aa13.33□□□□□ -0.28
SMG1-205ENST00000561947 PNISRQ8TF01 805 aaKnown RBP13.33□□□□□ -0.28
SMG1-205ENST00000561947 YEATS2Q9ULM3 1422 aa13.33□□□□□ -0.28
SMG1-205ENST00000561947 PIK3C2BO00750 1634 aa13.32□□□□□ -0.28
SMG1-205ENST00000561947 SYNMO15061 1565 aa13.32□□□□□ -0.28
SMG1-205ENST00000561947 NOS1P29475 1434 aa13.32□□□□□ -0.28
SMG1-205ENST00000561947 PANK3Q9H999 370 aa13.32□□□□□ -0.28
SMG1-205ENST00000561947 CFAP70Q5T0N1 1121 aa13.31□□□□□ -0.28
SMG1-205ENST00000561947 SETBP1Q9Y6X0 1596 aa13.31□□□□□ -0.28
SMG1-205ENST00000561947 ARHGAP31Q2M1Z3 1444 aa13.31□□□□□ -0.28
SMG1-205ENST00000561947 LRPPRCP42704 1394 aaKnown RBP13.31□□□□□ -0.28
SMG1-205ENST00000561947 CDCA8Q53HL2 280 aa13.31□□□□□ -0.28
SMG1-205ENST00000561947 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
SMG1-205ENST00000561947 TSPOAP1O95153 1857 aa13.3□□□□□ -0.28
SMG1-205ENST00000561947 KDM5AP29375 1690 aaKnown RBP13.3□□□□□ -0.28
SMG1-205ENST00000561947 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
SMG1-205ENST00000561947 MYOM1P52179 1685 aa13.3□□□□□ -0.28
SMG1-205ENST00000561947 NLRP13Q86W25 1043 aa13.3□□□□□ -0.28
SMG1-205ENST00000561947 BCANQ96GW7 911 aa13.3□□□□□ -0.28
SMG1-205ENST00000561947 CHGAP10645 457 aaKnown RBP13.29□□□□□ -0.28
SMG1-205ENST00000561947 PIK3C2GO75747 1445 aa13.28□□□□□ -0.28
SMG1-205ENST00000561947 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
SMG1-205ENST00000561947 CC2D1BQ5T0F9 858 aaKnown RBP13.26□□□□□ -0.29
SMG1-205ENST00000561947 REREQ9P2R6 1566 aa13.26□□□□□ -0.29
SMG1-205ENST00000561947 PREX1Q8TCU6 1659 aa13.26□□□□□ -0.29
SMG1-205ENST00000561947 SMG6Q86US8 1419 aaKnown RBP13.25□□□□□ -0.29
SMG1-205ENST00000561947 ERVK-7P63135 1459 aa13.25□□□□□ -0.29
SMG1-205ENST00000561947 NEXMIFQ5QGS0 1516 aa13.25□□□□□ -0.29
SMG1-205ENST00000561947 ADGRB1O14514 1584 aa13.25□□□□□ -0.29
SMG1-205ENST00000561947 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
SMG1-205ENST00000561947 C14orf93Q9H972 538 aaKnown RBP13.24□□□□□ -0.29
SMG1-205ENST00000561947 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
SMG1-205ENST00000561947 ASXL1Q8IXJ9 1541 aa13.23□□□□□ -0.29
SMG1-205ENST00000561947 QRICH2Q9H0J4 1663 aa13.22□□□□□ -0.29
SMG1-205ENST00000561947 MYO5BQ9ULV0 1848 aa13.22□□□□□ -0.29
SMG1-205ENST00000561947 AGLP35573 1532 aa13.22□□□□□ -0.29
SMG1-205ENST00000561947 KIF13AQ9H1H9 1805 aa13.22□□□□□ -0.29
SMG1-205ENST00000561947 NUDCQ9Y266 331 aa13.21□□□□□ -0.29
SMG1-205ENST00000561947 INSRP06213 1382 aa13.21□□□□□ -0.29
SMG1-205ENST00000561947 ERICH6BQ5W0A0 696 aa13.21□□□□□ -0.3
SMG1-205ENST00000561947 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.3
SMG1-205ENST00000561947 CENPJQ9HC77 1338 aaPredicted RBP13.2□□□□□ -0.3
SMG1-205ENST00000561947 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
SMG1-205ENST00000561947 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
SMG1-205ENST00000561947 TMEM131LA2VDJ0 1609 aa13.2□□□□□ -0.3
SMG1-205ENST00000561947 IDI1Q13907 227 aa13.2□□□□□ -0.3
SMG1-205ENST00000561947 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
SMG1-205ENST00000561947 IRX6P78412 446 aaPredicted RBP13.19□□□□□ -0.3
SMG1-205ENST00000561947 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
SMG1-205ENST00000561947 ARHGEF28Q8N1W1 1705 aaKnown RBP13.19□□□□□ -0.3
SMG1-205ENST00000561947 BLMP54132 1417 aaPredicted RBP13.18□□□□□ -0.3
SMG1-205ENST00000561947 TRAK1Q9UPV9 953 aa13.17□□□□□ -0.3
SMG1-205ENST00000561947 CLTCQ00610 1675 aaKnown RBP13.17□□□□□ -0.3
SMG1-205ENST00000561947 PPP2R1AP30153 589 aa13.16□□□□□ -0.3
SMG1-205ENST00000561947 PPP6R1Q9UPN7 881 aa13.16□□□□□ -0.3
SMG1-205ENST00000561947 ARHGEF40Q8TER5 1519 aa13.16□□□□□ -0.3
SMG1-205ENST00000561947 TMEM132EQ6IEE7 984 aa13.16□□□□□ -0.3
SMG1-205ENST00000561947 SENP3-EIF4A1A0A087X0R7 540 aa13.16□□□□□ -0.3
SMG1-205ENST00000561947 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
SMG1-205ENST00000561947 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
SMG1-205ENST00000561947 RNF123Q5XPI4 1314 aa13.14□□□□□ -0.31
SMG1-205ENST00000561947 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
SMG1-205ENST00000561947 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
SMG1-205ENST00000561947 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
SMG1-205ENST00000561947 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
SMG1-205ENST00000561947 PDE3BQ13370 1112 aa13.12□□□□□ -0.31
SMG1-205ENST00000561947 TULP4Q9NRJ4 1543 aa13.11□□□□□ -0.31
SMG1-205ENST00000561947 USP32Q8NFA0 1604 aa13.1□□□□□ -0.31
SMG1-205ENST00000561947 PUS7Q96PZ0 661 aaKnown RBP13.1□□□□□ -0.31
SMG1-205ENST00000561947 WDR43Q15061 677 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMG1-205ENST00000561947 SALL2Q9Y467 1007 aaPredicted RBP13.09□□□□□ -0.31
SMG1-205ENST00000561947 EVC2Q86UK5 1308 aa13.09□□□□□ -0.31
SMG1-205ENST00000561947 NSD3Q9BZ95 1437 aa13.08□□□□□ -0.31
SMG1-205ENST00000561947 ADAMTS8Q9UP79 889 aa13.08□□□□□ -0.31
SMG1-205ENST00000561947 ALKQ9UM73 1620 aa13.07□□□□□ -0.32
SMG1-205ENST00000561947 SLC12A5Q9H2X9 1139 aa13.07□□□□□ -0.32
SMG1-205ENST00000561947 A2ML1A8K2U0 1454 aa13.07□□□□□ -0.32
SMG1-205ENST00000561947 PTPRMP28827 1452 aa13.07□□□□□ -0.32
SMG1-205ENST00000561947 MLECQ14165 292 aa13.06□□□□□ -0.32
SMG1-205ENST00000561947 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
SMG1-205ENST00000561947 YTHDC2Q9H6S0 1430 aaKnown RBP13.06□□□□□ -0.32
SMG1-205ENST00000561947 STK26Q9P289 416 aa13.04□□□□□ -0.32
SMG1-205ENST00000561947 SETD1AO15047 1707 aaKnown RBP13.04□□□□□ -0.32
SMG1-205ENST00000561947 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
SMG1-205ENST00000561947 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
SMG1-205ENST00000561947 RIMS2Q9UQ26 1411 aa13.03□□□□□ -0.32
SMG1-205ENST00000561947 RCAN3Q9UKA8 241 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms