RNA–Protein interactions for RNA: ENST00000561886.1

SMIM1-203, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

TSL 2 BASIC

Gene SMIM1, Length 491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-203ENST00000561886 MSH6P52701 1360 aa30.13■■■□□ 2.41
SMIM1-203ENST00000561886 NKTRP30414 1462 aaKnown RBP30.12■■■□□ 2.41
SMIM1-203ENST00000561886 PPP1R15AO75807 674 aaPredicted RBP30.11■■■□□ 2.41
SMIM1-203ENST00000561886 NWD1Q149M9 1564 aa30.11■■■□□ 2.41
SMIM1-203ENST00000561886 ADGRL2O95490 1459 aa30.1■■■□□ 2.41
SMIM1-203ENST00000561886 SLAIN2Q9P270 581 aa30.09■■■□□ 2.41
SMIM1-203ENST00000561886 ANKRD50Q9ULJ7 1429 aa30.08■■■□□ 2.41
SMIM1-203ENST00000561886 RIMS2Q9UQ26 1411 aa30.06■■■□□ 2.4
SMIM1-203ENST00000561886 ZFYVE9O95405 1425 aa30.05■■■□□ 2.4
SMIM1-203ENST00000561886 PLEKHG1Q9ULL1 1385 aa30.05■■■□□ 2.4
SMIM1-203ENST00000561886 CHGAP10645 457 aaKnown RBP30.05■■■□□ 2.4
SMIM1-203ENST00000561886 RPRD2Q5VT52 1461 aaKnown RBP30.05■■■□□ 2.4
SMIM1-203ENST00000561886 MYO5BQ9ULV0 1848 aa30.04■■■□□ 2.4
SMIM1-203ENST00000561886 GCC2Q8IWJ2 1684 aa30.02■■■□□ 2.4
SMIM1-203ENST00000561886 NUTM2DQ5VT03 806 aaPredicted RBP30.02■■■□□ 2.4
SMIM1-203ENST00000561886 PHLPP1O60346 1717 aa30.02■■■□□ 2.4
SMIM1-203ENST00000561886 HDGFP51858 240 aaKnown RBP30.01■■■□□ 2.39
SMIM1-203ENST00000561886 C14orf37Q86TY3 774 aa30■■■□□ 2.39
SMIM1-203ENST00000561886 CHD2O14647 1828 aaKnown RBP29.99■■■□□ 2.39
SMIM1-203ENST00000561886 TMEM131LA2VDJ0 1609 aa29.98■■■□□ 2.39
SMIM1-203ENST00000561886 JCADQ9P266 1359 aa29.98■■■□□ 2.39
SMIM1-203ENST00000561886 TBX22Q9Y458 520 aa29.96■■■□□ 2.39
SMIM1-203ENST00000561886 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.94■■■□□ 2.38
SMIM1-203ENST00000561886 SETD1AO15047 1707 aaKnown RBP29.91■■■□□ 2.38
SMIM1-203ENST00000561886 ADAMTS13Q76LX8 1427 aa29.89■■■□□ 2.38
SMIM1-203ENST00000561886 UNC13BO14795 1591 aa29.89■■■□□ 2.38
SMIM1-203ENST00000561886 COL16A1Q07092 1604 aaPredicted RBP29.89■■■□□ 2.37
SMIM1-203ENST00000561886 ATF3P18847 181 aa29.87■■■□□ 2.37
SMIM1-203ENST00000561886 MEX3CQ5U5Q3 659 aaKnown RBP29.87■■■□□ 2.37
SMIM1-203ENST00000561886 E9PCH4 1651 aa29.87■■■□□ 2.37
SMIM1-203ENST00000561886 NCOA3Q9Y6Q9 1424 aa29.86■■■□□ 2.37
SMIM1-203ENST00000561886 CADPS2Q86UW7 1296 aa29.85■■■□□ 2.37
SMIM1-203ENST00000561886 C19orf44Q9H6X5 657 aa29.85■■■□□ 2.37
SMIM1-203ENST00000561886 LRP6O75581 1613 aa29.84■■■□□ 2.37
SMIM1-203ENST00000561886 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.82■■■□□ 2.36
SMIM1-203ENST00000561886 SPATA31A6Q5VVP1 1343 aa29.81■■■□□ 2.36
SMIM1-203ENST00000561886 AMOTL2Q9Y2J4 779 aa29.81■■■□□ 2.36
SMIM1-203ENST00000561886 ITGAEP38570 1179 aa29.8■■■□□ 2.36
SMIM1-203ENST00000561886 DIP2AQ14689 1571 aa29.8■■■□□ 2.36
SMIM1-203ENST00000561886 NUP155O75694 1391 aa29.79■■■□□ 2.36
SMIM1-203ENST00000561886 PIK3R4Q99570 1358 aa29.79■■■□□ 2.36
SMIM1-203ENST00000561886 TRIM52Q96A61 297 aa29.78■■■□□ 2.36
SMIM1-203ENST00000561886 IQGAP3Q86VI3 1631 aa29.78■■■□□ 2.36
SMIM1-203ENST00000561886 PTPRUQ92729 1446 aa29.77■■■□□ 2.36
SMIM1-203ENST00000561886 ROCK1Q13464 1354 aa29.77■■■□□ 2.36
SMIM1-203ENST00000561886 AHDC1Q5TGY3 1603 aaPredicted RBP29.76■■■□□ 2.35
SMIM1-203ENST00000561886 TRPM2O94759 1503 aa29.76■■■□□ 2.35
SMIM1-203ENST00000561886 NUTM2BA6NNL0 878 aaPredicted RBP29.75■■■□□ 2.35
SMIM1-203ENST00000561886 NUTM2EB1AL46 878 aaPredicted RBP29.75■■■□□ 2.35
SMIM1-203ENST00000561886 ZNF772Q68DY9 489 aaPredicted RBP29.75■■■□□ 2.35
SMIM1-203ENST00000561886 BRINP3Q76B58 766 aa29.75■■■□□ 2.35
SMIM1-203ENST00000561886 NUTM2AQ8IVF1 878 aaPredicted RBP29.75■■■□□ 2.35
SMIM1-203ENST00000561886 SHPRHQ149N8 1683 aa29.7■■■□□ 2.35
SMIM1-203ENST00000561886 ZNF326Q5BKZ1 582 aaKnown RBP29.69■■■□□ 2.34
SMIM1-203ENST00000561886 PPARGC1BQ86YN6 1023 aaKnown RBP29.66■■■□□ 2.34
SMIM1-203ENST00000561886 UPF1Q92900 1129 aaKnown RBP eCLIP29.66■■■□□ 2.34
SMIM1-203ENST00000561886 RXRBP28702 533 aa29.64■■■□□ 2.34
SMIM1-203ENST00000561886 NRXN3Q9Y4C0 1643 aa29.63■■■□□ 2.33
SMIM1-203ENST00000561886 ASXL1Q8IXJ9 1541 aa29.63■■■□□ 2.33
SMIM1-203ENST00000561886 METP08581 1390 aa29.62■■■□□ 2.33
SMIM1-203ENST00000561886 DCCP43146 1447 aa29.62■■■□□ 2.33
SMIM1-203ENST00000561886 XRN1Q8IZH2 1706 aaKnown RBP29.61■■■□□ 2.33
SMIM1-203ENST00000561886 SETBP1Q9Y6X0 1596 aa29.6■■■□□ 2.33
SMIM1-203ENST00000561886 DDX17Q92841 729 aaKnown RBP29.6■■■□□ 2.33
SMIM1-203ENST00000561886 MST1RQ04912 1400 aa29.6■■■□□ 2.33
SMIM1-203ENST00000561886 AFF2P51816 1311 aa29.59■■■□□ 2.33
SMIM1-203ENST00000561886 SPHKAPQ2M3C7 1700 aa29.57■■■□□ 2.32
SMIM1-203ENST00000561886 SETD5Q9C0A6 1442 aa29.56■■■□□ 2.32
SMIM1-203ENST00000561886 LRRC59Q96AG4 307 aaKnown RBP29.55■■■□□ 2.32
SMIM1-203ENST00000561886 C8orf37Q96NL8 207 aa29.53■■■□□ 2.32
SMIM1-203ENST00000561886 NHSL1Q5SYE7 1610 aa29.53■■■□□ 2.32
SMIM1-203ENST00000561886 ADGRL3Q9HAR2 1447 aa29.51■■■□□ 2.31
SMIM1-203ENST00000561886 CLTCL1P53675 1640 aa29.48■■■□□ 2.31
SMIM1-203ENST00000561886 PNPLA6Q8IY17 1366 aa29.48■■■□□ 2.31
SMIM1-203ENST00000561886 NEXMIFQ5QGS0 1516 aa29.47■■■□□ 2.31
SMIM1-203ENST00000561886 QTRT2Q9H974 415 aaKnown RBP29.47■■■□□ 2.31
SMIM1-203ENST00000561886 CDK12Q9NYV4 1490 aaPredicted RBP29.47■■■□□ 2.31
SMIM1-203ENST00000561886 NALCNQ8IZF0 1738 aa29.46■■■□□ 2.31
SMIM1-203ENST00000561886 ADAMTS2O95450 1211 aa29.44■■■□□ 2.3
SMIM1-203ENST00000561886 C1orf167Q5SNV9 1468 aa29.42■■■□□ 2.3
SMIM1-203ENST00000561886 RGS12O14924 1447 aa29.41■■■□□ 2.3
SMIM1-203ENST00000561886 RBM6P78332 1123 aaKnown RBP29.41■■■□□ 2.3
SMIM1-203ENST00000561886 NGLY1Q96IV0 654 aa29.41■■■□□ 2.3
SMIM1-203ENST00000561886 ORAI2Q96SN7 254 aa29.39■■■□□ 2.3
SMIM1-203ENST00000561886 ROBO2Q9HCK4 1378 aa29.38■■■□□ 2.29
SMIM1-203ENST00000561886 KIF1BO60333 1816 aa29.36■■■□□ 2.29
SMIM1-203ENST00000561886 VGFO15240 615 aaPredicted RBP29.34■■■□□ 2.29
SMIM1-203ENST00000561886 NAIPQ13075 1403 aa29.32■■■□□ 2.28
SMIM1-203ENST00000561886 PTCH1Q13635 1447 aa29.32■■■□□ 2.28
SMIM1-203ENST00000561886 SOS2Q07890 1332 aaPredicted RBP29.3■■■□□ 2.28
SMIM1-203ENST00000561886 USP21Q9UK80 565 aa29.29■■■□□ 2.28
SMIM1-203ENST00000561886 LAMC1P11047 1609 aa29.26■■■□□ 2.27
SMIM1-203ENST00000561886 SLC4A1APQ9BWU0 796 aaKnown RBP29.24■■■□□ 2.27
SMIM1-203ENST00000561886 RPGRIP1LQ68CZ1 1315 aa29.23■■■□□ 2.27
SMIM1-203ENST00000561886 RRBP1Q9P2E9 1410 aaKnown RBP29.23■■■□□ 2.27
SMIM1-203ENST00000561886 TRPC5Q9UL62 973 aaPredicted RBP29.23■■■□□ 2.27
SMIM1-203ENST00000561886 ESCO1Q5FWF5 840 aa29.22■■■□□ 2.27
SMIM1-203ENST00000561886 HFM1A2PYH4 1435 aa29.21■■■□□ 2.27
SMIM1-203ENST00000561886 ATAD2Q6PL18 1390 aa29.2■■■□□ 2.26
SMIM1-203ENST00000561886 XPCQ01831 940 aaPredicted RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms