RNA–Protein interactions for RNA: ENST00000561886.1

SMIM1-203, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

TSL 2 BASIC

Gene SMIM1, Length 491 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-203ENST00000561886 MSH6P52701 1360 aa30.13■■■□□ 2.41
SMIM1-203ENST00000561886 NKTRP30414 1462 aaKnown RBP30.12■■■□□ 2.41
SMIM1-203ENST00000561886 PPP1R15AO75807 674 aaPredicted RBP30.11■■■□□ 2.41
SMIM1-203ENST00000561886 NWD1Q149M9 1564 aa30.11■■■□□ 2.41
SMIM1-203ENST00000561886 ADGRL2O95490 1459 aa30.1■■■□□ 2.41
SMIM1-203ENST00000561886 SLAIN2Q9P270 581 aa30.09■■■□□ 2.41
SMIM1-203ENST00000561886 ANKRD50Q9ULJ7 1429 aa30.08■■■□□ 2.41
SMIM1-203ENST00000561886 RIMS2Q9UQ26 1411 aa30.06■■■□□ 2.4
SMIM1-203ENST00000561886 ZFYVE9O95405 1425 aa30.05■■■□□ 2.4
SMIM1-203ENST00000561886 PLEKHG1Q9ULL1 1385 aa30.05■■■□□ 2.4
SMIM1-203ENST00000561886 CHGAP10645 457 aaKnown RBP30.05■■■□□ 2.4
SMIM1-203ENST00000561886 RPRD2Q5VT52 1461 aaKnown RBP30.05■■■□□ 2.4
SMIM1-203ENST00000561886 MYO5BQ9ULV0 1848 aa30.04■■■□□ 2.4
SMIM1-203ENST00000561886 GCC2Q8IWJ2 1684 aa30.02■■■□□ 2.4
SMIM1-203ENST00000561886 NUTM2DQ5VT03 806 aaPredicted RBP30.02■■■□□ 2.4
SMIM1-203ENST00000561886 PHLPP1O60346 1717 aa30.02■■■□□ 2.4
SMIM1-203ENST00000561886 HDGFP51858 240 aaKnown RBP30.01■■■□□ 2.39
SMIM1-203ENST00000561886 C14orf37Q86TY3 774 aa30■■■□□ 2.39
SMIM1-203ENST00000561886 CHD2O14647 1828 aaKnown RBP29.99■■■□□ 2.39
SMIM1-203ENST00000561886 TMEM131LA2VDJ0 1609 aa29.98■■■□□ 2.39
SMIM1-203ENST00000561886 JCADQ9P266 1359 aa29.98■■■□□ 2.39
SMIM1-203ENST00000561886 TBX22Q9Y458 520 aa29.96■■■□□ 2.39
SMIM1-203ENST00000561886 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.94■■■□□ 2.38
SMIM1-203ENST00000561886 SETD1AO15047 1707 aaKnown RBP29.91■■■□□ 2.38
SMIM1-203ENST00000561886 ADAMTS13Q76LX8 1427 aa29.89■■■□□ 2.38
SMIM1-203ENST00000561886 UNC13BO14795 1591 aa29.89■■■□□ 2.38
SMIM1-203ENST00000561886 COL16A1Q07092 1604 aaPredicted RBP29.89■■■□□ 2.37
SMIM1-203ENST00000561886 ATF3P18847 181 aa29.87■■■□□ 2.37
SMIM1-203ENST00000561886 MEX3CQ5U5Q3 659 aaKnown RBP29.87■■■□□ 2.37
SMIM1-203ENST00000561886 E9PCH4 1651 aa29.87■■■□□ 2.37
SMIM1-203ENST00000561886 NCOA3Q9Y6Q9 1424 aa29.86■■■□□ 2.37
SMIM1-203ENST00000561886 CADPS2Q86UW7 1296 aa29.85■■■□□ 2.37
SMIM1-203ENST00000561886 C19orf44Q9H6X5 657 aa29.85■■■□□ 2.37
SMIM1-203ENST00000561886 LRP6O75581 1613 aa29.84■■■□□ 2.37
SMIM1-203ENST00000561886 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.82■■■□□ 2.36
SMIM1-203ENST00000561886 SPATA31A6Q5VVP1 1343 aa29.81■■■□□ 2.36
SMIM1-203ENST00000561886 AMOTL2Q9Y2J4 779 aa29.81■■■□□ 2.36
SMIM1-203ENST00000561886 ITGAEP38570 1179 aa29.8■■■□□ 2.36
SMIM1-203ENST00000561886 DIP2AQ14689 1571 aa29.8■■■□□ 2.36
SMIM1-203ENST00000561886 NUP155O75694 1391 aa29.79■■■□□ 2.36
SMIM1-203ENST00000561886 PIK3R4Q99570 1358 aa29.79■■■□□ 2.36
SMIM1-203ENST00000561886 TRIM52Q96A61 297 aa29.78■■■□□ 2.36
SMIM1-203ENST00000561886 IQGAP3Q86VI3 1631 aa29.78■■■□□ 2.36
SMIM1-203ENST00000561886 PTPRUQ92729 1446 aa29.77■■■□□ 2.36
SMIM1-203ENST00000561886 ROCK1Q13464 1354 aa29.77■■■□□ 2.36
SMIM1-203ENST00000561886 AHDC1Q5TGY3 1603 aaPredicted RBP29.76■■■□□ 2.35
SMIM1-203ENST00000561886 TRPM2O94759 1503 aa29.76■■■□□ 2.35
SMIM1-203ENST00000561886 NUTM2BA6NNL0 878 aaPredicted RBP29.75■■■□□ 2.35
SMIM1-203ENST00000561886 NUTM2EB1AL46 878 aaPredicted RBP29.75■■■□□ 2.35
SMIM1-203ENST00000561886 ZNF772Q68DY9 489 aaPredicted RBP29.75■■■□□ 2.35
SMIM1-203ENST00000561886 BRINP3Q76B58 766 aa29.75■■■□□ 2.35
SMIM1-203ENST00000561886 NUTM2AQ8IVF1 878 aaPredicted RBP29.75■■■□□ 2.35
SMIM1-203ENST00000561886 SHPRHQ149N8 1683 aa29.7■■■□□ 2.35
SMIM1-203ENST00000561886 ZNF326Q5BKZ1 582 aaKnown RBP29.69■■■□□ 2.34
SMIM1-203ENST00000561886 PPARGC1BQ86YN6 1023 aaKnown RBP29.66■■■□□ 2.34
SMIM1-203ENST00000561886 UPF1Q92900 1129 aaKnown RBP eCLIP29.66■■■□□ 2.34
SMIM1-203ENST00000561886 RXRBP28702 533 aa29.64■■■□□ 2.34
SMIM1-203ENST00000561886 NRXN3Q9Y4C0 1643 aa29.63■■■□□ 2.33
SMIM1-203ENST00000561886 ASXL1Q8IXJ9 1541 aa29.63■■■□□ 2.33
SMIM1-203ENST00000561886 METP08581 1390 aa29.62■■■□□ 2.33
SMIM1-203ENST00000561886 DCCP43146 1447 aa29.62■■■□□ 2.33
SMIM1-203ENST00000561886 XRN1Q8IZH2 1706 aaKnown RBP29.61■■■□□ 2.33
SMIM1-203ENST00000561886 SETBP1Q9Y6X0 1596 aa29.6■■■□□ 2.33
SMIM1-203ENST00000561886 DDX17Q92841 729 aaKnown RBP29.6■■■□□ 2.33
SMIM1-203ENST00000561886 MST1RQ04912 1400 aa29.6■■■□□ 2.33
SMIM1-203ENST00000561886 AFF2P51816 1311 aa29.59■■■□□ 2.33
SMIM1-203ENST00000561886 SPHKAPQ2M3C7 1700 aa29.57■■■□□ 2.32
SMIM1-203ENST00000561886 SETD5Q9C0A6 1442 aa29.56■■■□□ 2.32
SMIM1-203ENST00000561886 LRRC59Q96AG4 307 aaKnown RBP29.55■■■□□ 2.32
SMIM1-203ENST00000561886 C8orf37Q96NL8 207 aa29.53■■■□□ 2.32
SMIM1-203ENST00000561886 NHSL1Q5SYE7 1610 aa29.53■■■□□ 2.32
SMIM1-203ENST00000561886 ADGRL3Q9HAR2 1447 aa29.51■■■□□ 2.31
SMIM1-203ENST00000561886 CLTCL1P53675 1640 aa29.48■■■□□ 2.31
SMIM1-203ENST00000561886 PNPLA6Q8IY17 1366 aa29.48■■■□□ 2.31
SMIM1-203ENST00000561886 NEXMIFQ5QGS0 1516 aa29.47■■■□□ 2.31
SMIM1-203ENST00000561886 QTRT2Q9H974 415 aaKnown RBP29.47■■■□□ 2.31
SMIM1-203ENST00000561886 CDK12Q9NYV4 1490 aaPredicted RBP29.47■■■□□ 2.31
SMIM1-203ENST00000561886 NALCNQ8IZF0 1738 aa29.46■■■□□ 2.31
SMIM1-203ENST00000561886 ADAMTS2O95450 1211 aa29.44■■■□□ 2.3
SMIM1-203ENST00000561886 C1orf167Q5SNV9 1468 aa29.42■■■□□ 2.3
SMIM1-203ENST00000561886 RGS12O14924 1447 aa29.41■■■□□ 2.3
SMIM1-203ENST00000561886 RBM6P78332 1123 aaKnown RBP29.41■■■□□ 2.3
SMIM1-203ENST00000561886 NGLY1Q96IV0 654 aa29.41■■■□□ 2.3
SMIM1-203ENST00000561886 ORAI2Q96SN7 254 aa29.39■■■□□ 2.3
SMIM1-203ENST00000561886 ROBO2Q9HCK4 1378 aa29.38■■■□□ 2.29
SMIM1-203ENST00000561886 KIF1BO60333 1816 aa29.36■■■□□ 2.29
SMIM1-203ENST00000561886 VGFO15240 615 aaPredicted RBP29.34■■■□□ 2.29
SMIM1-203ENST00000561886 NAIPQ13075 1403 aa29.32■■■□□ 2.28
SMIM1-203ENST00000561886 PTCH1Q13635 1447 aa29.32■■■□□ 2.28
SMIM1-203ENST00000561886 SOS2Q07890 1332 aaPredicted RBP29.3■■■□□ 2.28
SMIM1-203ENST00000561886 USP21Q9UK80 565 aa29.29■■■□□ 2.28
SMIM1-203ENST00000561886 LAMC1P11047 1609 aa29.26■■■□□ 2.27
SMIM1-203ENST00000561886 SLC4A1APQ9BWU0 796 aaKnown RBP29.24■■■□□ 2.27
SMIM1-203ENST00000561886 RPGRIP1LQ68CZ1 1315 aa29.23■■■□□ 2.27
SMIM1-203ENST00000561886 RRBP1Q9P2E9 1410 aaKnown RBP29.23■■■□□ 2.27
SMIM1-203ENST00000561886 TRPC5Q9UL62 973 aaPredicted RBP29.23■■■□□ 2.27
SMIM1-203ENST00000561886 ESCO1Q5FWF5 840 aa29.22■■■□□ 2.27
SMIM1-203ENST00000561886 HFM1A2PYH4 1435 aa29.21■■■□□ 2.27
SMIM1-203ENST00000561886 ATAD2Q6PL18 1390 aa29.2■■■□□ 2.26
SMIM1-203ENST00000561886 XPCQ01831 940 aaPredicted RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms