RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 PRAG1Q86YV5 1406 aa18.28■□□□□ 0.52
COTL1-202ENST00000561707 NLRP1Q9C000 1473 aa18.27■□□□□ 0.52
COTL1-202ENST00000561707 UBR1Q8IWV7 1749 aa18.27■□□□□ 0.52
COTL1-202ENST00000561707 NBPF1Q3BBV0 1214 aa18.27■□□□□ 0.52
COTL1-202ENST00000561707 NEXMIFQ5QGS0 1516 aa18.27■□□□□ 0.51
COTL1-202ENST00000561707 VGFO15240 615 aaPredicted RBP18.25■□□□□ 0.51
COTL1-202ENST00000561707 RIMS2Q9UQ26 1411 aa18.24■□□□□ 0.51
COTL1-202ENST00000561707 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
COTL1-202ENST00000561707 CFAP70Q5T0N1 1121 aa18.24■□□□□ 0.51
COTL1-202ENST00000561707 MYOM2P54296 1465 aa18.22■□□□□ 0.51
COTL1-202ENST00000561707 THEMISQ8N1K5 641 aaPredicted RBP18.22■□□□□ 0.51
COTL1-202ENST00000561707 HIRIP3Q9BW71 556 aaPredicted RBP18.22■□□□□ 0.51
COTL1-202ENST00000561707 TRPM1Q7Z4N2 1603 aa18.22■□□□□ 0.51
COTL1-202ENST00000561707 KDM5AP29375 1690 aaKnown RBP18.22■□□□□ 0.51
COTL1-202ENST00000561707 TMEM2Q9UHN6 1383 aa18.2■□□□□ 0.5
COTL1-202ENST00000561707 LTKP29376 864 aa18.2■□□□□ 0.5
COTL1-202ENST00000561707 ZFYVE9O95405 1425 aa18.2■□□□□ 0.5
COTL1-202ENST00000561707 RALGAPBQ86X10 1494 aa18.2■□□□□ 0.5
COTL1-202ENST00000561707 NRXN1Q9ULB1 1477 aa18.2■□□□□ 0.5
COTL1-202ENST00000561707 TXNDC2Q86VQ3 553 aa18.19■□□□□ 0.5
COTL1-202ENST00000561707 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
COTL1-202ENST00000561707 C14orf93Q9H972 538 aaKnown RBP18.19■□□□□ 0.5
COTL1-202ENST00000561707 CEP170BQ9Y4F5 1589 aaPredicted RBP18.19■□□□□ 0.5
COTL1-202ENST00000561707 HSPA5P11021 654 aaKnown RBP18.18■□□□□ 0.5
COTL1-202ENST00000561707 HDGFP51858 240 aaKnown RBP18.18■□□□□ 0.5
COTL1-202ENST00000561707 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
COTL1-202ENST00000561707 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
COTL1-202ENST00000561707 ZNF316A6NFI3 1004 aaPredicted RBP18.17■□□□□ 0.5
COTL1-202ENST00000561707 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
COTL1-202ENST00000561707 PIK3C2GO75747 1445 aa18.15■□□□□ 0.5
COTL1-202ENST00000561707 EIF4G2P78344 907 aaKnown RBP eCLIP18.15■□□□□ 0.55e-7■■■■□ 24.2
COTL1-202ENST00000561707 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.5
COTL1-202ENST00000561707 BCANQ96GW7 911 aa18.14■□□□□ 0.49
COTL1-202ENST00000561707 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
COTL1-202ENST00000561707 ZNF142P52746 1687 aaPredicted RBP18.14■□□□□ 0.49
COTL1-202ENST00000561707 KIAA1210Q9ULL0 1709 aa18.14■□□□□ 0.49
COTL1-202ENST00000561707 SLIT1O75093 1534 aa18.13■□□□□ 0.49
COTL1-202ENST00000561707 GPRASP1Q5JY77 1395 aa18.12■□□□□ 0.49
COTL1-202ENST00000561707 ALKQ9UM73 1620 aa18.1■□□□□ 0.49
COTL1-202ENST00000561707 USP47Q96K76 1375 aa18.1■□□□□ 0.49
COTL1-202ENST00000561707 ANKLE2Q86XL3 938 aa18.09■□□□□ 0.49
COTL1-202ENST00000561707 NCKAP5LQ9HCH0 1330 aa18.08■□□□□ 0.49
COTL1-202ENST00000561707 ST20-MTHFSA0A0A6YYL1 179 aa18.08■□□□□ 0.48
COTL1-202ENST00000561707 HSPA2P54652 639 aa18.08■□□□□ 0.48
COTL1-202ENST00000561707 NRXN3Q9Y4C0 1643 aa18.08■□□□□ 0.48
COTL1-202ENST00000561707 PLEKHG1Q9ULL1 1385 aa18.07■□□□□ 0.48
COTL1-202ENST00000561707 SLC26A8Q96RN1 970 aa18.07■□□□□ 0.48
COTL1-202ENST00000561707 STK26Q9P289 416 aa18.07■□□□□ 0.48
COTL1-202ENST00000561707 TRAK1Q9UPV9 953 aa18.07■□□□□ 0.48
COTL1-202ENST00000561707 IQGAP1P46940 1657 aa18.06■□□□□ 0.48
COTL1-202ENST00000561707 LAMC1P11047 1609 aa18.06■□□□□ 0.48
COTL1-202ENST00000561707 SCAF11Q99590 1463 aaKnown RBP18.06■□□□□ 0.48
COTL1-202ENST00000561707 ADGRB1O14514 1584 aa18.05■□□□□ 0.48
COTL1-202ENST00000561707 SETBP1Q9Y6X0 1596 aa18.05■□□□□ 0.48
COTL1-202ENST00000561707 ASXL1Q8IXJ9 1541 aa18.04■□□□□ 0.48
COTL1-202ENST00000561707 SETD1AO15047 1707 aaKnown RBP18.04■□□□□ 0.48
COTL1-202ENST00000561707 C11orf95C9JLR9 678 aaPredicted RBP18.04■□□□□ 0.48
COTL1-202ENST00000561707 ADAMTS13Q76LX8 1427 aa18.04■□□□□ 0.48
COTL1-202ENST00000561707 METP08581 1390 aa18.04■□□□□ 0.48
COTL1-202ENST00000561707 TBX22Q9Y458 520 aa18.02■□□□□ 0.48
COTL1-202ENST00000561707 MED14O60244 1454 aa18.01■□□□□ 0.47
COTL1-202ENST00000561707 LMTK3Q96Q04 1460 aa18■□□□□ 0.47
COTL1-202ENST00000561707 YTHDC2Q9H6S0 1430 aaKnown RBP17.99■□□□□ 0.47
COTL1-202ENST00000561707 TESK2Q96S53 571 aa17.98■□□□□ 0.47
COTL1-202ENST00000561707 LRPPRCP42704 1394 aaKnown RBP17.97■□□□□ 0.47
COTL1-202ENST00000561707 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
COTL1-202ENST00000561707 NPHP4O75161 1426 aaPredicted RBP17.97■□□□□ 0.47
COTL1-202ENST00000561707 PTPRUQ92729 1446 aa17.96■□□□□ 0.47
COTL1-202ENST00000561707 SAFB2Q14151 953 aaKnown RBP eCLIP17.95■□□□□ 0.46
COTL1-202ENST00000561707 WAPLQ7Z5K2 1190 aa17.95■□□□□ 0.46
COTL1-202ENST00000561707 WASHC2AQ641Q2 1341 aa17.95■□□□□ 0.46
COTL1-202ENST00000561707 CENPJQ9HC77 1338 aaPredicted RBP17.95■□□□□ 0.46
COTL1-202ENST00000561707 ABCC11Q96J66 1382 aa17.94■□□□□ 0.46
COTL1-202ENST00000561707 PRAM1Q96QH2 718 aa17.94■□□□□ 0.46
COTL1-202ENST00000561707 POLR3GLQ9BT43 218 aa17.94■□□□□ 0.46
COTL1-202ENST00000561707 ARHGEF28Q8N1W1 1705 aaKnown RBP17.94■□□□□ 0.46
COTL1-202ENST00000561707 EIF3AQ14152 1382 aaKnown RBP17.93■□□□□ 0.46
COTL1-202ENST00000561707 POGKQ9P215 609 aa17.93■□□□□ 0.46
COTL1-202ENST00000561707 AMOTL2Q9Y2J4 779 aa17.93■□□□□ 0.46
COTL1-202ENST00000561707 STRCQ7RTU9 1775 aa17.92■□□□□ 0.46
COTL1-202ENST00000561707 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
COTL1-202ENST00000561707 KIF7Q2M1P5 1343 aa17.92■□□□□ 0.46
COTL1-202ENST00000561707 CCDC7Q96M83 1385 aa17.91■□□□□ 0.46
COTL1-202ENST00000561707 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
COTL1-202ENST00000561707 DIP2AQ14689 1571 aa17.9■□□□□ 0.46
COTL1-202ENST00000561707 DISP3Q9P2K9 1392 aa17.9■□□□□ 0.46
COTL1-202ENST00000561707 TMF1P82094 1093 aa17.89■□□□□ 0.45
COTL1-202ENST00000561707 SIRT1Q96EB6 747 aa17.89■□□□□ 0.45
COTL1-202ENST00000561707 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
COTL1-202ENST00000561707 QRICH2Q9H0J4 1663 aa17.89■□□□□ 0.45
COTL1-202ENST00000561707 CHD2O14647 1828 aaKnown RBP17.88■□□□□ 0.45
COTL1-202ENST00000561707 ROBO2Q9HCK4 1378 aa17.88■□□□□ 0.45
COTL1-202ENST00000561707 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
COTL1-202ENST00000561707 KCNA6P17658 529 aa17.87■□□□□ 0.45
COTL1-202ENST00000561707 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
COTL1-202ENST00000561707 PIK3R4Q99570 1358 aa17.86■□□□□ 0.45
COTL1-202ENST00000561707 TECPR2O15040 1411 aa17.86■□□□□ 0.45
COTL1-202ENST00000561707 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
COTL1-202ENST00000561707 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.45
COTL1-202ENST00000561707 XRN1Q8IZH2 1706 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms