RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 TRPM1Q7Z4N2 1603 aa27.84■■■□□ 2.05
IRF9-215ENST00000561415 PLPPR3Q6T4P5 718 aa27.83■■■□□ 2.05
IRF9-215ENST00000561415 STAG3Q9UJ98 1225 aa27.83■■■□□ 2.05
IRF9-215ENST00000561415 NRXN1Q9ULB1 1477 aa27.82■■■□□ 2.04
IRF9-215ENST00000561415 SETD1BQ9UPS6 1966 aaKnown RBP27.79■■■□□ 2.04
IRF9-215ENST00000561415 ZFYVE9O95405 1425 aa27.78■■■□□ 2.04
IRF9-215ENST00000561415 ADGRF5Q8IZF2 1346 aa27.77■■■□□ 2.04
IRF9-215ENST00000561415 KIAA1210Q9ULL0 1709 aa27.76■■■□□ 2.03
IRF9-215ENST00000561415 PIK3C2GO75747 1445 aa27.75■■■□□ 2.03
IRF9-215ENST00000561415 ZNF142P52746 1687 aaPredicted RBP27.74■■■□□ 2.03
IRF9-215ENST00000561415 CEP170BQ9Y4F5 1589 aaPredicted RBP27.74■■■□□ 2.03
IRF9-215ENST00000561415 VGFO15240 615 aaPredicted RBP27.73■■■□□ 2.03
IRF9-215ENST00000561415 RIMS2Q9UQ26 1411 aa27.72■■■□□ 2.03
IRF9-215ENST00000561415 ROCK2O75116 1388 aaKnown RBP27.72■■■□□ 2.03
IRF9-215ENST00000561415 LAMC1P11047 1609 aa27.71■■■□□ 2.03
IRF9-215ENST00000561415 GPRASP1Q5JY77 1395 aa27.71■■■□□ 2.03
IRF9-215ENST00000561415 TMEM2Q9UHN6 1383 aa27.7■■■□□ 2.02
IRF9-215ENST00000561415 KDM4FA0A1W2PPD8 638 aa27.68■■■□□ 2.02
IRF9-215ENST00000561415 NUTM2DQ5VT03 806 aaPredicted RBP27.68■■■□□ 2.02
IRF9-215ENST00000561415 SLIT1O75093 1534 aa27.67■■■□□ 2.02
IRF9-215ENST00000561415 ZNF316A6NFI3 1004 aaPredicted RBP27.65■■■□□ 2.02
IRF9-215ENST00000561415 NBPF1Q3BBV0 1214 aa27.65■■■□□ 2.02
IRF9-215ENST00000561415 CARD11Q9BXL7 1154 aa27.65■■■□□ 2.02
IRF9-215ENST00000561415 ARHGAP23Q9P227 1491 aa27.65■■■□□ 2.02
IRF9-215ENST00000561415 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.65■■■□□ 2.02
IRF9-215ENST00000561415 EIF4G2P78344 907 aaKnown RBP eCLIP27.63■■■□□ 2.01
IRF9-215ENST00000561415 SETBP1Q9Y6X0 1596 aa27.63■■■□□ 2.01
IRF9-215ENST00000561415 THEMISQ8N1K5 641 aaPredicted RBP27.63■■■□□ 2.01
IRF9-215ENST00000561415 HDGFP51858 240 aaKnown RBP27.62■■■□□ 2.01
IRF9-215ENST00000561415 CFAP70Q5T0N1 1121 aa27.62■■■□□ 2.01
IRF9-215ENST00000561415 USP47Q96K76 1375 aa27.62■■■□□ 2.01
IRF9-215ENST00000561415 C14orf93Q9H972 538 aaKnown RBP27.61■■■□□ 2.01
IRF9-215ENST00000561415 HSPA5P11021 654 aaKnown RBP27.59■■■□□ 2.01
IRF9-215ENST00000561415 IQGAP1P46940 1657 aa27.58■■■□□ 2.01
IRF9-215ENST00000561415 ADGRB1O14514 1584 aa27.57■■■□□ 2
IRF9-215ENST00000561415 NRXN3Q9Y4C0 1643 aa27.57■■■□□ 2
IRF9-215ENST00000561415 ALKQ9UM73 1620 aa27.55■■■□□ 2
IRF9-215ENST00000561415 HIRIP3Q9BW71 556 aaPredicted RBP27.54■■■□□ 2
IRF9-215ENST00000561415 SETD1AO15047 1707 aaKnown RBP27.53■■■□□ 2
IRF9-215ENST00000561415 LTKP29376 864 aa27.53■■■□□ 2
IRF9-215ENST00000561415 EID1Q9Y6B2 187 aa27.53■■■□□ 2
IRF9-215ENST00000561415 SCAF11Q99590 1463 aaKnown RBP27.53■■■□□ 2
IRF9-215ENST00000561415 PLEKHG1Q9ULL1 1385 aa27.52■■■□□ 2
IRF9-215ENST00000561415 TXNDC2Q86VQ3 553 aa27.52■■■□□ 2
IRF9-215ENST00000561415 ASXL1Q8IXJ9 1541 aa27.51■■□□□ 1.99
IRF9-215ENST00000561415 SENP3Q9H4L4 574 aaPredicted RBP27.46■■□□□ 1.99
IRF9-215ENST00000561415 EIF3AQ14152 1382 aaKnown RBP27.45■■□□□ 1.98
IRF9-215ENST00000561415 ST20-MTHFSA0A0A6YYL1 179 aa27.45■■□□□ 1.98
IRF9-215ENST00000561415 TMEM132EQ6IEE7 984 aa27.45■■□□□ 1.98
IRF9-215ENST00000561415 ADAMTS13Q76LX8 1427 aa27.44■■□□□ 1.98
IRF9-215ENST00000561415 MED14O60244 1454 aa27.42■■□□□ 1.98
IRF9-215ENST00000561415 ANKLE2Q86XL3 938 aa27.42■■□□□ 1.98
IRF9-215ENST00000561415 POLR1AO95602 1720 aaPredicted RBP27.42■■□□□ 1.98
IRF9-215ENST00000561415 DIP2AQ14689 1571 aa27.41■■□□□ 1.98
IRF9-215ENST00000561415 ARHGEF28Q8N1W1 1705 aaKnown RBP27.4■■□□□ 1.98
IRF9-215ENST00000561415 YTHDC2Q9H6S0 1430 aaKnown RBP27.4■■□□□ 1.98
IRF9-215ENST00000561415 BCANQ96GW7 911 aa27.39■■□□□ 1.98
IRF9-215ENST00000561415 LMTK3Q96Q04 1460 aa27.38■■□□□ 1.97
IRF9-215ENST00000561415 METP08581 1390 aa27.37■■□□□ 1.97
IRF9-215ENST00000561415 TESK2Q96S53 571 aa27.35■■□□□ 1.97
IRF9-215ENST00000561415 TRAK1Q9UPV9 953 aa27.35■■□□□ 1.97
IRF9-215ENST00000561415 LRPPRCP42704 1394 aaKnown RBP27.34■■□□□ 1.97
IRF9-215ENST00000561415 KNDC1Q76NI1 1749 aa27.33■■□□□ 1.97
IRF9-215ENST00000561415 TBX22Q9Y458 520 aa27.32■■□□□ 1.96
IRF9-215ENST00000561415 DLC1Q96QB1 1528 aa27.32■■□□□ 1.96
IRF9-215ENST00000561415 C11orf95C9JLR9 678 aaPredicted RBP27.32■■□□□ 1.96
IRF9-215ENST00000561415 QRICH2Q9H0J4 1663 aa27.32■■□□□ 1.96
IRF9-215ENST00000561415 WASHC2AQ641Q2 1341 aa27.32■■□□□ 1.96
IRF9-215ENST00000561415 SLC26A8Q96RN1 970 aa27.31■■□□□ 1.96
IRF9-215ENST00000561415 SBNO2Q9Y2G9 1366 aa27.31■■□□□ 1.96
IRF9-215ENST00000561415 STK26Q9P289 416 aa27.3■■□□□ 1.96
IRF9-215ENST00000561415 CENPJQ9HC77 1338 aaPredicted RBP27.3■■□□□ 1.96
IRF9-215ENST00000561415 ABCC11Q96J66 1382 aa27.3■■□□□ 1.96
IRF9-215ENST00000561415 CCDC7Q96M83 1385 aa27.3■■□□□ 1.96
IRF9-215ENST00000561415 NPHP4O75161 1426 aaPredicted RBP27.3■■□□□ 1.96
IRF9-215ENST00000561415 TECPR2O15040 1411 aa27.3■■□□□ 1.96
IRF9-215ENST00000561415 KIF7Q2M1P5 1343 aa27.28■■□□□ 1.96
IRF9-215ENST00000561415 CPS1P31327 1500 aa27.27■■□□□ 1.96
IRF9-215ENST00000561415 PIK3R4Q99570 1358 aa27.26■■□□□ 1.95
IRF9-215ENST00000561415 NCKAP5LQ9HCH0 1330 aa27.25■■□□□ 1.95
IRF9-215ENST00000561415 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
IRF9-215ENST00000561415 DISP3Q9P2K9 1392 aa27.24■■□□□ 1.95
IRF9-215ENST00000561415 SLC24A1O60721 1099 aa27.24■■□□□ 1.95
IRF9-215ENST00000561415 HSPA2P54652 639 aa27.24■■□□□ 1.95
IRF9-215ENST00000561415 TMF1P82094 1093 aa27.24■■□□□ 1.95
IRF9-215ENST00000561415 PTPRUQ92729 1446 aa27.24■■□□□ 1.95
IRF9-215ENST00000561415 XRN1Q8IZH2 1706 aaKnown RBP27.22■■□□□ 1.95
IRF9-215ENST00000561415 FAM135BQ49AJ0 1406 aa27.21■■□□□ 1.95
IRF9-215ENST00000561415 PRAM1Q96QH2 718 aa27.21■■□□□ 1.95
IRF9-215ENST00000561415 DIEXFQ68CQ4 756 aaKnown RBP27.2■■□□□ 1.95
IRF9-215ENST00000561415 SIRT1Q96EB6 747 aa27.2■■□□□ 1.94
IRF9-215ENST00000561415 CHD2O14647 1828 aaKnown RBP27.19■■□□□ 1.94
IRF9-215ENST00000561415 STRCQ7RTU9 1775 aa27.18■■□□□ 1.94
IRF9-215ENST00000561415 DDX10Q13206 875 aaKnown RBP27.17■■□□□ 1.94
IRF9-215ENST00000561415 POGKQ9P215 609 aa27.17■■□□□ 1.94
IRF9-215ENST00000561415 PTCH1Q13635 1447 aa27.17■■□□□ 1.94
IRF9-215ENST00000561415 ROBO2Q9HCK4 1378 aa27.16■■□□□ 1.94
IRF9-215ENST00000561415 AMOTL2Q9Y2J4 779 aa27.15■■□□□ 1.94
IRF9-215ENST00000561415 PLEKHH1Q9ULM0 1364 aa27.15■■□□□ 1.94
IRF9-215ENST00000561415 CDCA8Q53HL2 280 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms