RNA–Protein interactions for RNA: ENST00000561366.1

IDH3A-223, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 3 BASIC

Gene IDH3A, Length 389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-223	ENST00000561366	DCAF11	Q8TEB1	546 aa		10.23	□□□□□ -0.77
IDH3A-223	ENST00000561366	SETD1B	Q9UPS6	1966 aa	Known RBP	10.23	□□□□□ -0.77
IDH3A-223	ENST00000561366	ADGRF5	Q8IZF2	1346 aa		10.22	□□□□□ -0.77
IDH3A-223	ENST00000561366	L3MBTL2	Q969R5	705 aa		10.21	□□□□□ -0.77
IDH3A-223	ENST00000561366	DMRT2	Q9Y5R5	561 aa		10.21	□□□□□ -0.77
IDH3A-223	ENST00000561366	NPHP4	O75161	1426 aa	Predicted RBP	10.21	□□□□□ -0.78
IDH3A-223	ENST00000561366	TMEM131L	A2VDJ0	1609 aa		10.21	□□□□□ -0.78
IDH3A-223	ENST00000561366	UBR1	Q8IWV7	1749 aa		10.21	□□□□□ -0.78
IDH3A-223	ENST00000561366	VGF	O15240	615 aa	Predicted RBP	10.2	□□□□□ -0.78
IDH3A-223	ENST00000561366	SPATA31E1	Q6ZUB1	1445 aa		10.2	□□□□□ -0.78
IDH3A-223	ENST00000561366	SCAF11	Q99590	1463 aa	Known RBP	10.2	□□□□□ -0.78
IDH3A-223	ENST00000561366	ZNF142	P52746	1687 aa	Predicted RBP	10.19	□□□□□ -0.78
IDH3A-223	ENST00000561366	ARHGAP23	Q9P227	1491 aa		10.19	□□□□□ -0.78
IDH3A-223	ENST00000561366	ZFYVE9	O95405	1425 aa		10.19	□□□□□ -0.78
IDH3A-223	ENST00000561366	RPGRIP1L	Q68CZ1	1315 aa		10.19	□□□□□ -0.78
IDH3A-223	ENST00000561366	RBM33	Q96EV2	1170 aa	Known RBP	10.19	□□□□□ -0.78
IDH3A-223	ENST00000561366	SLIT1	O75093	1534 aa		10.18	□□□□□ -0.78
IDH3A-223	ENST00000561366	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.18	□□□□□ -0.78
IDH3A-223	ENST00000561366	TMEM132E	Q6IEE7	984 aa		10.18	□□□□□ -0.78
IDH3A-223	ENST00000561366	CFAP70	Q5T0N1	1121 aa		10.17	□□□□□ -0.78
IDH3A-223	ENST00000561366	STK26	Q9P289	416 aa		10.17	□□□□□ -0.78
IDH3A-223	ENST00000561366	PLEKHG1	Q9ULL1	1385 aa		10.16	□□□□□ -0.78
IDH3A-223	ENST00000561366	MYO5B	Q9ULV0	1848 aa		10.16	□□□□□ -0.78
IDH3A-223	ENST00000561366	STRC	Q7RTU9	1775 aa		10.16	□□□□□ -0.78
IDH3A-223	ENST00000561366	TONSL	Q96HA7	1378 aa		10.15	□□□□□ -0.78
IDH3A-223	ENST00000561366	NEURL4	Q96JN8	1562 aa		10.15	□□□□□ -0.78
IDH3A-223	ENST00000561366	TBX22	Q9Y458	520 aa		10.15	□□□□□ -0.78
IDH3A-223	ENST00000561366	NEXMIF	Q5QGS0	1516 aa		10.15	□□□□□ -0.78
IDH3A-223	ENST00000561366	KIF1B	O60333	1816 aa		10.14	□□□□□ -0.79
IDH3A-223	ENST00000561366	MET	P08581	1390 aa		10.14	□□□□□ -0.79
IDH3A-223	ENST00000561366	MED14	O60244	1454 aa		10.13	□□□□□ -0.79
IDH3A-223	ENST00000561366	NBPF8	Q3BBV2	869 aa		10.13	□□□□□ -0.79
IDH3A-223	ENST00000561366	AMOTL2	Q9Y2J4	779 aa		10.13	□□□□□ -0.79
IDH3A-223	ENST00000561366	ADAMTS13	Q76LX8	1427 aa		10.13	□□□□□ -0.79
IDH3A-223	ENST00000561366	KCNA6	P17658	529 aa		10.12	□□□□□ -0.79
IDH3A-223	ENST00000561366	NBPF1	Q3BBV0	1214 aa		10.12	□□□□□ -0.79
IDH3A-223	ENST00000561366	PROSER2	Q86WR7	435 aa	Predicted RBP	10.12	□□□□□ -0.79
IDH3A-223	ENST00000561366	C14orf93	Q9H972	538 aa	Known RBP	10.12	□□□□□ -0.79
IDH3A-223	ENST00000561366	KDM5A	P29375	1690 aa	Known RBP	10.1	□□□□□ -0.79
IDH3A-223	ENST00000561366	IQGAP1	P46940	1657 aa		10.1	□□□□□ -0.79
IDH3A-223	ENST00000561366	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
IDH3A-223	ENST00000561366	C14orf37	Q86TY3	774 aa		10.1	□□□□□ -0.79
IDH3A-223	ENST00000561366	TRAK1	Q9UPV9	953 aa		10.1	□□□□□ -0.79
IDH3A-223	ENST00000561366	PTPRU	Q92729	1446 aa		10.09	□□□□□ -0.79
IDH3A-223	ENST00000561366	WAPL	Q7Z5K2	1190 aa		10.09	□□□□□ -0.79
IDH3A-223	ENST00000561366	POLR1A	O95602	1720 aa	Predicted RBP	10.09	□□□□□ -0.79
IDH3A-223	ENST00000561366	CLSPN	Q9HAW4	1339 aa		10.08	□□□□□ -0.8
IDH3A-223	ENST00000561366	PIK3C2G	O75747	1445 aa		10.08	□□□□□ -0.8
IDH3A-223	ENST00000561366	CERK	Q8TCT0	537 aa		10.08	□□□□□ -0.8
IDH3A-223	ENST00000561366	ALK	Q9UM73	1620 aa		10.07	□□□□□ -0.8
IDH3A-223	ENST00000561366	PPL	O60437	1756 aa		10.07	□□□□□ -0.8
IDH3A-223	ENST00000561366	MYOM2	P54296	1465 aa		10.07	□□□□□ -0.8
IDH3A-223	ENST00000561366	STAC3	Q96MF2	364 aa		10.07	□□□□□ -0.8
IDH3A-223	ENST00000561366	PRAG1	Q86YV5	1406 aa		10.07	□□□□□ -0.8
IDH3A-223	ENST00000561366	POGK	Q9P215	609 aa		10.06	□□□□□ -0.8
IDH3A-223	ENST00000561366	NRXN3	Q9Y4C0	1643 aa		10.06	□□□□□ -0.8
IDH3A-223	ENST00000561366	SETBP1	Q9Y6X0	1596 aa		10.05	□□□□□ -0.8
IDH3A-223	ENST00000561366	NRXN1	Q9ULB1	1477 aa		10.05	□□□□□ -0.8
IDH3A-223	ENST00000561366	TMEM94	Q12767	1356 aa		10.05	□□□□□ -0.8
IDH3A-223	ENST00000561366	ROBO2	Q9HCK4	1378 aa		10.05	□□□□□ -0.8
IDH3A-223	ENST00000561366	PRAM1	Q96QH2	718 aa		10.05	□□□□□ -0.8
IDH3A-223	ENST00000561366	SCAF1	Q9H7N4	1312 aa	Known RBP	10.05	□□□□□ -0.8
IDH3A-223	ENST00000561366	PLEKHH1	Q9ULM0	1364 aa		10.04	□□□□□ -0.8
IDH3A-223	ENST00000561366	NUTM2F	A1L443	756 aa		10.04	□□□□□ -0.8
IDH3A-223	ENST00000561366	PIP4K2B	P78356	416 aa		10.04	□□□□□ -0.8
IDH3A-223	ENST00000561366	CARD11	Q9BXL7	1154 aa		10.04	□□□□□ -0.8
IDH3A-223	ENST00000561366	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.04	□□□□□ -0.8
IDH3A-223	ENST00000561366	LTBP4	Q8N2S1	1624 aa		10.04	□□□□□ -0.8
IDH3A-223	ENST00000561366	ROCK2	O75116	1388 aa	Known RBP	10.03	□□□□□ -0.8
IDH3A-223	ENST00000561366	LRPPRC	P42704	1394 aa	Known RBP	10.03	□□□□□ -0.8
IDH3A-223	ENST00000561366	PIK3R4	Q99570	1358 aa		10.03	□□□□□ -0.8
IDH3A-223	ENST00000561366	UBAP1L	F5GYI3	381 aa		10.03	□□□□□ -0.8
IDH3A-223	ENST00000561366	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.03	□□□□□ -0.8
IDH3A-223	ENST00000561366	IFT172	Q9UG01	1749 aa		10.03	□□□□□ -0.8
IDH3A-223	ENST00000561366	TIMELESS	Q9UNS1	1208 aa		10.03	□□□□□ -0.8
IDH3A-223	ENST00000561366	ASXL1	Q8IXJ9	1541 aa		10.02	□□□□□ -0.8
IDH3A-223	ENST00000561366	LRRC7	Q96NW7	1537 aa		10.02	□□□□□ -0.8
IDH3A-223	ENST00000561366	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.02	□□□□□ -0.81
IDH3A-223	ENST00000561366	STRCP1	A6NGW2	1772 aa		10.01	□□□□□ -0.81
IDH3A-223	ENST00000561366	DIP2A	Q14689	1571 aa		10.01	□□□□□ -0.81
IDH3A-223	ENST00000561366	ABCC11	Q96J66	1382 aa		10.01	□□□□□ -0.81
IDH3A-223	ENST00000561366	ATF3	P18847	181 aa		10	□□□□□ -0.81
IDH3A-223	ENST00000561366	CPS1	P31327	1500 aa		10	□□□□□ -0.81
IDH3A-223	ENST00000561366	C19orf44	Q9H6X5	657 aa		9.99	□□□□□ -0.81
IDH3A-223	ENST00000561366	MSH6	P52701	1360 aa		9.99	□□□□□ -0.81
IDH3A-223	ENST00000561366	ADGRB1	O14514	1584 aa		9.98	□□□□□ -0.81
IDH3A-223	ENST00000561366	MSH5	O43196	834 aa		9.98	□□□□□ -0.81
IDH3A-223	ENST00000561366	TOM1	O60784	492 aa		9.97	□□□□□ -0.81
IDH3A-223	ENST00000561366	PIAS4	Q8N2W9	510 aa	Predicted RBP	9.97	□□□□□ -0.81
IDH3A-223	ENST00000561366	SIRT1	Q96EB6	747 aa		9.97	□□□□□ -0.81
IDH3A-223	ENST00000561366	CENPJ	Q9HC77	1338 aa	Predicted RBP	9.97	□□□□□ -0.81
IDH3A-223	ENST00000561366	NKTR	P30414	1462 aa	Known RBP	9.97	□□□□□ -0.81
IDH3A-223	ENST00000561366	NWD1	Q149M9	1564 aa		9.97	□□□□□ -0.81
IDH3A-223	ENST00000561366	SETD1A	O15047	1707 aa	Known RBP	9.96	□□□□□ -0.81
IDH3A-223	ENST00000561366	CHD2	O14647	1828 aa	Known RBP	9.96	□□□□□ -0.81
IDH3A-223	ENST00000561366	ST20-MTHFS	A0A0A6YYL1	179 aa		9.96	□□□□□ -0.82
IDH3A-223	ENST00000561366	SLAIN2	Q9P270	581 aa		9.96	□□□□□ -0.82
IDH3A-223	ENST00000561366	CADPS2	Q86UW7	1296 aa		9.95	□□□□□ -0.82
IDH3A-223	ENST00000561366	POLR3GL	Q9BT43	218 aa		9.95	□□□□□ -0.82
IDH3A-223	ENST00000561366	CDK19	Q9BWU1	502 aa		9.95	□□□□□ -0.82

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