RNA–Protein interactions for RNA: ENST00000561298.1

PKNOX2-213, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-213ENST00000561298 SCAF11Q99590 1463 aaKnown RBP14□□□□□ -0.17
PKNOX2-213ENST00000561298 LTKP29376 864 aa14□□□□□ -0.17
PKNOX2-213ENST00000561298 NRXN3Q9Y4C0 1643 aa14□□□□□ -0.17
PKNOX2-213ENST00000561298 RIMS2Q9UQ26 1411 aa13.99□□□□□ -0.17
PKNOX2-213ENST00000561298 STRCP1A6NGW2 1772 aa13.98□□□□□ -0.17
PKNOX2-213ENST00000561298 SETD1AO15047 1707 aaKnown RBP13.98□□□□□ -0.17
PKNOX2-213ENST00000561298 CHGAP10645 457 aaKnown RBP13.97□□□□□ -0.17
PKNOX2-213ENST00000561298 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
PKNOX2-213ENST00000561298 NPHP4O75161 1426 aaPredicted RBP13.96□□□□□ -0.18
PKNOX2-213ENST00000561298 ANKLE2Q86XL3 938 aa13.95□□□□□ -0.18
PKNOX2-213ENST00000561298 TXNDC2Q86VQ3 553 aa13.94□□□□□ -0.18
PKNOX2-213ENST00000561298 CHD2O14647 1828 aaKnown RBP13.94□□□□□ -0.18
PKNOX2-213ENST00000561298 SETBP1Q9Y6X0 1596 aa13.93□□□□□ -0.18
PKNOX2-213ENST00000561298 PLEKHG1Q9ULL1 1385 aa13.93□□□□□ -0.18
PKNOX2-213ENST00000561298 NUTM2DQ5VT03 806 aaPredicted RBP13.92□□□□□ -0.18
PKNOX2-213ENST00000561298 ADAMTS13Q76LX8 1427 aa13.91□□□□□ -0.18
PKNOX2-213ENST00000561298 LTBP4Q8N2S1 1624 aa13.9□□□□□ -0.18
PKNOX2-213ENST00000561298 ZNF326Q5BKZ1 582 aaKnown RBP13.9□□□□□ -0.18
PKNOX2-213ENST00000561298 EID1Q9Y6B2 187 aa13.9□□□□□ -0.18
PKNOX2-213ENST00000561298 DIP2AQ14689 1571 aa13.9□□□□□ -0.18
PKNOX2-213ENST00000561298 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
PKNOX2-213ENST00000561298 MYOM2P54296 1465 aa13.89□□□□□ -0.19
PKNOX2-213ENST00000561298 NRXN1Q9ULB1 1477 aa13.89□□□□□ -0.19
PKNOX2-213ENST00000561298 RGL3Q3MIN7 710 aa13.89□□□□□ -0.19
PKNOX2-213ENST00000561298 SIN3AQ96ST3 1273 aa13.89□□□□□ -0.19
PKNOX2-213ENST00000561298 RPGRIP1LQ68CZ1 1315 aa13.89□□□□□ -0.19
PKNOX2-213ENST00000561298 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.88□□□□□ -0.19
PKNOX2-213ENST00000561298 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
PKNOX2-213ENST00000561298 CLSPNQ9HAW4 1339 aa13.88□□□□□ -0.19
PKNOX2-213ENST00000561298 NWD1Q149M9 1564 aa13.88□□□□□ -0.19
PKNOX2-213ENST00000561298 ALKQ9UM73 1620 aa13.87□□□□□ -0.19
PKNOX2-213ENST00000561298 ADGRF5Q8IZF2 1346 aa13.87□□□□□ -0.19
PKNOX2-213ENST00000561298 ASXL1Q8IXJ9 1541 aa13.86□□□□□ -0.19
PKNOX2-213ENST00000561298 SENP3Q9H4L4 574 aaPredicted RBP13.86□□□□□ -0.19
PKNOX2-213ENST00000561298 XRN1Q8IZH2 1706 aaKnown RBP13.86□□□□□ -0.19
PKNOX2-213ENST00000561298 PIK3C2GO75747 1445 aa13.85□□□□□ -0.19
PKNOX2-213ENST00000561298 ZNF335Q9H4Z2 1342 aaPredicted RBP13.85□□□□□ -0.19
PKNOX2-213ENST00000561298 LAMC1P11047 1609 aa13.84□□□□□ -0.19
PKNOX2-213ENST00000561298 PPP1R15AO75807 674 aaPredicted RBP13.84□□□□□ -0.19
PKNOX2-213ENST00000561298 HDGFP51858 240 aaKnown RBP13.84□□□□□ -0.19
PKNOX2-213ENST00000561298 SLC26A8Q96RN1 970 aa13.84□□□□□ -0.19
PKNOX2-213ENST00000561298 PTPRUQ92729 1446 aa13.83□□□□□ -0.2
PKNOX2-213ENST00000561298 KIAA1210Q9ULL0 1709 aa13.83□□□□□ -0.2
PKNOX2-213ENST00000561298 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
PKNOX2-213ENST00000561298 KNDC1Q76NI1 1749 aa13.81□□□□□ -0.2
PKNOX2-213ENST00000561298 TBX22Q9Y458 520 aa13.81□□□□□ -0.2
PKNOX2-213ENST00000561298 METP08581 1390 aa13.81□□□□□ -0.2
PKNOX2-213ENST00000561298 NEUROD1Q13562 356 aa13.8□□□□□ -0.2
PKNOX2-213ENST00000561298 CPS1P31327 1500 aa13.8□□□□□ -0.2
PKNOX2-213ENST00000561298 TRPM1Q7Z4N2 1603 aa13.79□□□□□ -0.2
PKNOX2-213ENST00000561298 DCAF11Q8TEB1 546 aa13.79□□□□□ -0.2
PKNOX2-213ENST00000561298 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
PKNOX2-213ENST00000561298 PIK3R4Q99570 1358 aa13.79□□□□□ -0.2
PKNOX2-213ENST00000561298 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
PKNOX2-213ENST00000561298 ADGRB1O14514 1584 aa13.79□□□□□ -0.2
PKNOX2-213ENST00000561298 NKTRP30414 1462 aaKnown RBP13.78□□□□□ -0.2
PKNOX2-213ENST00000561298 LRRC7Q96NW7 1537 aa13.78□□□□□ -0.2
PKNOX2-213ENST00000561298 BCANQ96GW7 911 aa13.77□□□□□ -0.21
PKNOX2-213ENST00000561298 KDM2AQ9Y2K7 1162 aa13.77□□□□□ -0.21
PKNOX2-213ENST00000561298 KCNA6P17658 529 aa13.76□□□□□ -0.21
PKNOX2-213ENST00000561298 C14orf93Q9H972 538 aaKnown RBP13.76□□□□□ -0.21
PKNOX2-213ENST00000561298 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
PKNOX2-213ENST00000561298 STAC3Q96MF2 364 aa13.75□□□□□ -0.21
PKNOX2-213ENST00000561298 ARHGEF28Q8N1W1 1705 aaKnown RBP13.75□□□□□ -0.21
PKNOX2-213ENST00000561298 NALCNQ8IZF0 1738 aa13.74□□□□□ -0.21
PKNOX2-213ENST00000561298 IQSEC2Q5JU85 1478 aa13.73□□□□□ -0.21
PKNOX2-213ENST00000561298 TECPR2O15040 1411 aa13.73□□□□□ -0.21
PKNOX2-213ENST00000561298 TMEM132EQ6IEE7 984 aa13.72□□□□□ -0.21
PKNOX2-213ENST00000561298 AMOTL2Q9Y2J4 779 aa13.72□□□□□ -0.21
PKNOX2-213ENST00000561298 PTCH1Q13635 1447 aa13.72□□□□□ -0.21
PKNOX2-213ENST00000561298 YTHDC2Q9H6S0 1430 aaKnown RBP13.72□□□□□ -0.21
PKNOX2-213ENST00000561298 TONSLQ96HA7 1378 aa13.71□□□□□ -0.21
PKNOX2-213ENST00000561298 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.71□□□□□ -0.21
PKNOX2-213ENST00000561298 NBPF8Q3BBV2 869 aa13.71□□□□□ -0.21
PKNOX2-213ENST00000561298 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.22
PKNOX2-213ENST00000561298 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.22
PKNOX2-213ENST00000561298 CERKQ8TCT0 537 aa13.7□□□□□ -0.22
PKNOX2-213ENST00000561298 TMEM94Q12767 1356 aa13.7□□□□□ -0.22
PKNOX2-213ENST00000561298 ABCC11Q96J66 1382 aa13.69□□□□□ -0.22
PKNOX2-213ENST00000561298 DLC1Q96QB1 1528 aa13.69□□□□□ -0.22
PKNOX2-213ENST00000561298 NBPF1Q3BBV0 1214 aa13.68□□□□□ -0.22
PKNOX2-213ENST00000561298 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
PKNOX2-213ENST00000561298 RALGAPBQ86X10 1494 aa13.67□□□□□ -0.22
PKNOX2-213ENST00000561298 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
PKNOX2-213ENST00000561298 PLEKHH1Q9ULM0 1364 aa13.66□□□□□ -0.22
PKNOX2-213ENST00000561298 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
PKNOX2-213ENST00000561298 STK26Q9P289 416 aa13.65□□□□□ -0.22
PKNOX2-213ENST00000561298 GPRASP1Q5JY77 1395 aa13.65□□□□□ -0.22
PKNOX2-213ENST00000561298 RGPD8O14715 1765 aaPredicted RBP13.65□□□□□ -0.22
PKNOX2-213ENST00000561298 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
PKNOX2-213ENST00000561298 QRICH2Q9H0J4 1663 aa13.64□□□□□ -0.23
PKNOX2-213ENST00000561298 ADGRL3Q9HAR2 1447 aa13.64□□□□□ -0.23
PKNOX2-213ENST00000561298 TIMELESSQ9UNS1 1208 aa13.63□□□□□ -0.23
PKNOX2-213ENST00000561298 FMN2Q9NZ56 1722 aa13.63□□□□□ -0.23
PKNOX2-213ENST00000561298 ADGRB2O60241 1585 aa13.62□□□□□ -0.23
PKNOX2-213ENST00000561298 WAPLQ7Z5K2 1190 aa13.62□□□□□ -0.23
PKNOX2-213ENST00000561298 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
PKNOX2-213ENST00000561298 SIRT1Q96EB6 747 aa13.61□□□□□ -0.23
PKNOX2-213ENST00000561298 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
PKNOX2-213ENST00000561298 TRAK1Q9UPV9 953 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms