RNA–Protein interactions for RNA: ENST00000561091.1

SHF-209, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5

Gene SHF, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-209ENST00000561091 RIMS2Q9UQ26 1411 aa23.12■■□□□ 1.29
SHF-209ENST00000561091 POLR1AO95602 1720 aaPredicted RBP23.11■■□□□ 1.29
SHF-209ENST00000561091 ZFYVE9O95405 1425 aa23.11■■□□□ 1.29
SHF-209ENST00000561091 NUTM2DQ5VT03 806 aaPredicted RBP23.1■■□□□ 1.29
SHF-209ENST00000561091 TONSLQ96HA7 1378 aa23.09■■□□□ 1.29
SHF-209ENST00000561091 L3MBTL2Q969R5 705 aa23.07■■□□□ 1.28
SHF-209ENST00000561091 RPGRIP1LQ68CZ1 1315 aa23.07■■□□□ 1.28
SHF-209ENST00000561091 STRCQ7RTU9 1775 aa23.06■■□□□ 1.28
SHF-209ENST00000561091 LTKP29376 864 aa23.05■■□□□ 1.28
SHF-209ENST00000561091 DCAF11Q8TEB1 546 aa23.05■■□□□ 1.28
SHF-209ENST00000561091 KDM2AQ9Y2K7 1162 aa23.05■■□□□ 1.28
SHF-209ENST00000561091 SCAF11Q99590 1463 aaKnown RBP23.05■■□□□ 1.28
SHF-209ENST00000561091 TXNDC2Q86VQ3 553 aa23.04■■□□□ 1.28
SHF-209ENST00000561091 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
SHF-209ENST00000561091 NCKAP5LQ9HCH0 1330 aa23.03■■□□□ 1.28
SHF-209ENST00000561091 EID1Q9Y6B2 187 aa23.02■■□□□ 1.28
SHF-209ENST00000561091 MYOM2P54296 1465 aa23.02■■□□□ 1.28
SHF-209ENST00000561091 PPP1R15AO75807 674 aaPredicted RBP23.01■■□□□ 1.27
SHF-209ENST00000561091 ANKLE2Q86XL3 938 aa23.01■■□□□ 1.27
SHF-209ENST00000561091 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.01■■□□□ 1.27
SHF-209ENST00000561091 ADGRF5Q8IZF2 1346 aa23.01■■□□□ 1.27
SHF-209ENST00000561091 IQGAP1P46940 1657 aa23■■□□□ 1.27
SHF-209ENST00000561091 HDGFP51858 240 aaKnown RBP23■■□□□ 1.27
SHF-209ENST00000561091 NRXN3Q9Y4C0 1643 aa22.98■■□□□ 1.27
SHF-209ENST00000561091 VGFO15240 615 aaPredicted RBP22.98■■□□□ 1.27
SHF-209ENST00000561091 NRXN1Q9ULB1 1477 aa22.97■■□□□ 1.27
SHF-209ENST00000561091 PLEKHG1Q9ULL1 1385 aa22.96■■□□□ 1.27
SHF-209ENST00000561091 MED14O60244 1454 aa22.95■■□□□ 1.26
SHF-209ENST00000561091 NPHP4O75161 1426 aaPredicted RBP22.95■■□□□ 1.26
SHF-209ENST00000561091 TIMELESSQ9UNS1 1208 aa22.95■■□□□ 1.26
SHF-209ENST00000561091 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
SHF-209ENST00000561091 PIK3C2GO75747 1445 aa22.93■■□□□ 1.26
SHF-209ENST00000561091 PRAG1Q86YV5 1406 aa22.93■■□□□ 1.26
SHF-209ENST00000561091 BCANQ96GW7 911 aa22.93■■□□□ 1.26
SHF-209ENST00000561091 SETD1AO15047 1707 aaKnown RBP22.93■■□□□ 1.26
SHF-209ENST00000561091 ALKQ9UM73 1620 aa22.91■■□□□ 1.26
SHF-209ENST00000561091 STAC3Q96MF2 364 aa22.91■■□□□ 1.26
SHF-209ENST00000561091 TRPM1Q7Z4N2 1603 aa22.9■■□□□ 1.26
SHF-209ENST00000561091 NBPF8Q3BBV2 869 aa22.9■■□□□ 1.26
SHF-209ENST00000561091 ADAMTS13Q76LX8 1427 aa22.9■■□□□ 1.26
SHF-209ENST00000561091 LAMC1P11047 1609 aa22.9■■□□□ 1.26
SHF-209ENST00000561091 KIAA1210Q9ULL0 1709 aa22.88■■□□□ 1.25
SHF-209ENST00000561091 SLC26A8Q96RN1 970 aa22.88■■□□□ 1.25
SHF-209ENST00000561091 DIP2AQ14689 1571 aa22.87■■□□□ 1.25
SHF-209ENST00000561091 CFAP70Q5T0N1 1121 aa22.86■■□□□ 1.25
SHF-209ENST00000561091 ASXL1Q8IXJ9 1541 aa22.84■■□□□ 1.25
SHF-209ENST00000561091 C14orf93Q9H972 538 aaKnown RBP22.83■■□□□ 1.25
SHF-209ENST00000561091 TBX22Q9Y458 520 aa22.81■■□□□ 1.24
SHF-209ENST00000561091 METP08581 1390 aa22.8■■□□□ 1.24
SHF-209ENST00000561091 CHD2O14647 1828 aaKnown RBP22.8■■□□□ 1.24
SHF-209ENST00000561091 RALGAPBQ86X10 1494 aa22.79■■□□□ 1.24
SHF-209ENST00000561091 NBPF1Q3BBV0 1214 aa22.79■■□□□ 1.24
SHF-209ENST00000561091 TMEM132EQ6IEE7 984 aa22.79■■□□□ 1.24
SHF-209ENST00000561091 ADGRB1O14514 1584 aa22.79■■□□□ 1.24
SHF-209ENST00000561091 DMRT2Q9Y5R5 561 aa22.78■■□□□ 1.24
SHF-209ENST00000561091 STRCP1A6NGW2 1772 aa22.77■■□□□ 1.24
SHF-209ENST00000561091 ZEB1P37275 1124 aaPredicted RBP22.76■■□□□ 1.23
SHF-209ENST00000561091 PTPRUQ92729 1446 aa22.75■■□□□ 1.23
SHF-209ENST00000561091 ROCK2O75116 1388 aaKnown RBP22.75■■□□□ 1.23
SHF-209ENST00000561091 XRN1Q8IZH2 1706 aaKnown RBP22.74■■□□□ 1.23
SHF-209ENST00000561091 KNDC1Q76NI1 1749 aa22.73■■□□□ 1.23
SHF-209ENST00000561091 NWD1Q149M9 1564 aa22.72■■□□□ 1.23
SHF-209ENST00000561091 PIK3R4Q99570 1358 aa22.72■■□□□ 1.23
SHF-209ENST00000561091 YTHDC2Q9H6S0 1430 aaKnown RBP22.72■■□□□ 1.23
SHF-209ENST00000561091 STK26Q9P289 416 aa22.71■■□□□ 1.23
SHF-209ENST00000561091 GPRASP1Q5JY77 1395 aa22.7■■□□□ 1.22
SHF-209ENST00000561091 ARHGEF28Q8N1W1 1705 aaKnown RBP22.7■■□□□ 1.22
SHF-209ENST00000561091 LRPPRCP42704 1394 aaKnown RBP22.69■■□□□ 1.22
SHF-209ENST00000561091 ZNF335Q9H4Z2 1342 aaPredicted RBP22.69■■□□□ 1.22
SHF-209ENST00000561091 AMOTL2Q9Y2J4 779 aa22.68■■□□□ 1.22
SHF-209ENST00000561091 CARD11Q9BXL7 1154 aa22.67■■□□□ 1.22
SHF-209ENST00000561091 CPS1P31327 1500 aa22.67■■□□□ 1.22
SHF-209ENST00000561091 KCNA6P17658 529 aa22.66■■□□□ 1.22
SHF-209ENST00000561091 TRAK1Q9UPV9 953 aa22.66■■□□□ 1.22
SHF-209ENST00000561091 ABCC11Q96J66 1382 aa22.64■■□□□ 1.22
SHF-209ENST00000561091 TECPR2O15040 1411 aa22.64■■□□□ 1.21
SHF-209ENST00000561091 ROBO2Q9HCK4 1378 aa22.63■■□□□ 1.21
SHF-209ENST00000561091 DLC1Q96QB1 1528 aa22.62■■□□□ 1.21
SHF-209ENST00000561091 NKTRP30414 1462 aaKnown RBP22.62■■□□□ 1.21
SHF-209ENST00000561091 XIRP1Q702N8 1843 aaKnown RBP22.61■■□□□ 1.21
SHF-209ENST00000561091 PTCH1Q13635 1447 aa22.6■■□□□ 1.21
SHF-209ENST00000561091 LTBP4Q8N2S1 1624 aa22.6■■□□□ 1.21
SHF-209ENST00000561091 QRICH2Q9H0J4 1663 aa22.59■■□□□ 1.21
SHF-209ENST00000561091 PLEKHH1Q9ULM0 1364 aa22.59■■□□□ 1.21
SHF-209ENST00000561091 WAPLQ7Z5K2 1190 aa22.58■■□□□ 1.21
SHF-209ENST00000561091 RBM33Q96EV2 1170 aaKnown RBP22.58■■□□□ 1.21
SHF-209ENST00000561091 USP47Q96K76 1375 aa22.58■■□□□ 1.21
SHF-209ENST00000561091 PROSER2Q86WR7 435 aaPredicted RBP22.57■■□□□ 1.2
SHF-209ENST00000561091 PRAM1Q96QH2 718 aa22.57■■□□□ 1.2
SHF-209ENST00000561091 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.57■■□□□ 1.2
SHF-209ENST00000561091 FAM135BQ49AJ0 1406 aa22.57■■□□□ 1.2
SHF-209ENST00000561091 SAFB2Q14151 953 aaKnown RBP eCLIP22.56■■□□□ 1.2
SHF-209ENST00000561091 NALCNQ8IZF0 1738 aa22.56■■□□□ 1.2
SHF-209ENST00000561091 LRRC7Q96NW7 1537 aa22.56■■□□□ 1.2
SHF-209ENST00000561091 EIF3AQ14152 1382 aaKnown RBP22.54■■□□□ 1.2
SHF-209ENST00000561091 SIRT1Q96EB6 747 aa22.54■■□□□ 1.2
SHF-209ENST00000561091 POGKQ9P215 609 aa22.54■■□□□ 1.2
SHF-209ENST00000561091 CENPJQ9HC77 1338 aaPredicted RBP22.52■■□□□ 1.2
SHF-209ENST00000561091 TMEM94Q12767 1356 aa22.51■■□□□ 1.19
SHF-209ENST00000561091 HSPA5P11021 654 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms