RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 TMEM131LA2VDJ0 1609 aa29.71■■■□□ 2.35
CRNDE-210ENST00000560912 ZFYVE9O95405 1425 aa29.71■■■□□ 2.35
CRNDE-210ENST00000560912 ANKRD50Q9ULJ7 1429 aa29.71■■■□□ 2.35
CRNDE-210ENST00000560912 SLC26A8Q96RN1 970 aa29.7■■■□□ 2.35
CRNDE-210ENST00000560912 SLC52A1Q9NWF4 448 aa29.69■■■□□ 2.34
CRNDE-210ENST00000560912 RGS17Q9UGC6 210 aaPredicted RBP29.69■■■□□ 2.34
CRNDE-210ENST00000560912 E9PCH4 1651 aa29.64■■■□□ 2.34
CRNDE-210ENST00000560912 PROSER2Q86WR7 435 aaPredicted RBP29.64■■■□□ 2.34
CRNDE-210ENST00000560912 PLEKHG1Q9ULL1 1385 aa29.64■■■□□ 2.33
CRNDE-210ENST00000560912 PHLPP1O60346 1717 aa29.62■■■□□ 2.33
CRNDE-210ENST00000560912 RBM33Q96EV2 1170 aaKnown RBP29.6■■■□□ 2.33
CRNDE-210ENST00000560912 RIMS2Q9UQ26 1411 aa29.6■■■□□ 2.33
CRNDE-210ENST00000560912 FAM50AQ14320 339 aaKnown RBP29.59■■■□□ 2.33
CRNDE-210ENST00000560912 MSH6P52701 1360 aa29.59■■■□□ 2.33
CRNDE-210ENST00000560912 IQGAP3Q86VI3 1631 aa29.59■■■□□ 2.33
CRNDE-210ENST00000560912 DIP2AQ14689 1571 aa29.56■■■□□ 2.32
CRNDE-210ENST00000560912 COL16A1Q07092 1604 aaPredicted RBP29.54■■■□□ 2.32
CRNDE-210ENST00000560912 BCANQ96GW7 911 aa29.51■■■□□ 2.31
CRNDE-210ENST00000560912 ADAMTS13Q76LX8 1427 aa29.5■■■□□ 2.31
CRNDE-210ENST00000560912 NCOA3Q9Y6Q9 1424 aa29.49■■■□□ 2.31
CRNDE-210ENST00000560912 ROCK1Q13464 1354 aa29.49■■■□□ 2.31
CRNDE-210ENST00000560912 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.48■■■□□ 2.31
CRNDE-210ENST00000560912 POTEAQ6S8J7 498 aa29.48■■■□□ 2.31
CRNDE-210ENST00000560912 PPP1R15AO75807 674 aaPredicted RBP29.47■■■□□ 2.31
CRNDE-210ENST00000560912 SLAIN2Q9P270 581 aa29.47■■■□□ 2.31
CRNDE-210ENST00000560912 HDGFP51858 240 aaKnown RBP29.46■■■□□ 2.31
CRNDE-210ENST00000560912 TBX22Q9Y458 520 aa29.46■■■□□ 2.31
CRNDE-210ENST00000560912 SETD1AO15047 1707 aaKnown RBP29.45■■■□□ 2.3
CRNDE-210ENST00000560912 JCADQ9P266 1359 aa29.44■■■□□ 2.3
CRNDE-210ENST00000560912 AHDC1Q5TGY3 1603 aaPredicted RBP29.43■■■□□ 2.3
CRNDE-210ENST00000560912 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.43■■■□□ 2.3
CRNDE-210ENST00000560912 PIK3R4Q99570 1358 aa29.42■■■□□ 2.3
CRNDE-210ENST00000560912 TRPM2O94759 1503 aa29.42■■■□□ 2.3
CRNDE-210ENST00000560912 SHPRHQ149N8 1683 aa29.41■■■□□ 2.3
CRNDE-210ENST00000560912 SPHKAPQ2M3C7 1700 aa29.4■■■□□ 2.3
CRNDE-210ENST00000560912 NRXN3Q9Y4C0 1643 aa29.4■■■□□ 2.3
CRNDE-210ENST00000560912 XRN1Q8IZH2 1706 aaKnown RBP29.38■■■□□ 2.29
CRNDE-210ENST00000560912 CHGAP10645 457 aaKnown RBP29.37■■■□□ 2.29
CRNDE-210ENST00000560912 LRP6O75581 1613 aa29.37■■■□□ 2.29
CRNDE-210ENST00000560912 SETBP1Q9Y6X0 1596 aa29.34■■■□□ 2.29
CRNDE-210ENST00000560912 NUTM2DQ5VT03 806 aaPredicted RBP29.33■■■□□ 2.29
CRNDE-210ENST00000560912 PTPRUQ92729 1446 aa29.33■■■□□ 2.29
CRNDE-210ENST00000560912 NUP155O75694 1391 aa29.32■■■□□ 2.28
CRNDE-210ENST00000560912 CADPS2Q86UW7 1296 aa29.3■■■□□ 2.28
CRNDE-210ENST00000560912 C19orf44Q9H6X5 657 aa29.29■■■□□ 2.28
CRNDE-210ENST00000560912 DCCP43146 1447 aa29.28■■■□□ 2.28
CRNDE-210ENST00000560912 SPATA31A6Q5VVP1 1343 aa29.28■■■□□ 2.28
CRNDE-210ENST00000560912 C14orf37Q86TY3 774 aa29.28■■■□□ 2.28
CRNDE-210ENST00000560912 NHSL1Q5SYE7 1610 aa29.27■■■□□ 2.28
CRNDE-210ENST00000560912 ATF3P18847 181 aa29.24■■■□□ 2.27
CRNDE-210ENST00000560912 AMOTL2Q9Y2J4 779 aa29.24■■■□□ 2.27
CRNDE-210ENST00000560912 ASXL1Q8IXJ9 1541 aa29.23■■■□□ 2.27
CRNDE-210ENST00000560912 CLTCL1P53675 1640 aa29.22■■■□□ 2.27
CRNDE-210ENST00000560912 NALCNQ8IZF0 1738 aa29.2■■■□□ 2.27
CRNDE-210ENST00000560912 NEXMIFQ5QGS0 1516 aa29.2■■■□□ 2.26
CRNDE-210ENST00000560912 BRINP3Q76B58 766 aa29.19■■■□□ 2.26
CRNDE-210ENST00000560912 MST1RQ04912 1400 aa29.19■■■□□ 2.26
CRNDE-210ENST00000560912 KIF1BO60333 1816 aa29.18■■■□□ 2.26
CRNDE-210ENST00000560912 ITGAEP38570 1179 aa29.15■■■□□ 2.26
CRNDE-210ENST00000560912 METP08581 1390 aa29.14■■■□□ 2.26
CRNDE-210ENST00000560912 SETD5Q9C0A6 1442 aa29.13■■■□□ 2.25
CRNDE-210ENST00000560912 MEX3CQ5U5Q3 659 aaKnown RBP29.13■■■□□ 2.25
CRNDE-210ENST00000560912 ZNF772Q68DY9 489 aaPredicted RBP29.13■■■□□ 2.25
CRNDE-210ENST00000560912 ADGRL3Q9HAR2 1447 aa29.12■■■□□ 2.25
CRNDE-210ENST00000560912 LAMC1P11047 1609 aa29.08■■■□□ 2.25
CRNDE-210ENST00000560912 CDK12Q9NYV4 1490 aaPredicted RBP29.07■■■□□ 2.24
CRNDE-210ENST00000560912 ZNF326Q5BKZ1 582 aaKnown RBP29.06■■■□□ 2.24
CRNDE-210ENST00000560912 RRBP1Q9P2E9 1410 aaKnown RBP29.03■■■□□ 2.24
CRNDE-210ENST00000560912 NAIPQ13075 1403 aa29.02■■■□□ 2.24
CRNDE-210ENST00000560912 PTCH1Q13635 1447 aa29.02■■■□□ 2.24
CRNDE-210ENST00000560912 TRIM52Q96A61 297 aa29.01■■■□□ 2.23
CRNDE-210ENST00000560912 NUTM2BA6NNL0 878 aaPredicted RBP29■■■□□ 2.23
CRNDE-210ENST00000560912 NUTM2EB1AL46 878 aaPredicted RBP29■■■□□ 2.23
CRNDE-210ENST00000560912 NUTM2AQ8IVF1 878 aaPredicted RBP29■■■□□ 2.23
CRNDE-210ENST00000560912 UPF1Q92900 1129 aaKnown RBP eCLIP29■■■□□ 2.23
CRNDE-210ENST00000560912 PRAG1Q86YV5 1406 aa29■■■□□ 2.23
CRNDE-210ENST00000560912 PPLO60437 1756 aa29■■■□□ 2.23
CRNDE-210ENST00000560912 PPARGC1BQ86YN6 1023 aaKnown RBP28.99■■■□□ 2.23
CRNDE-210ENST00000560912 PNPLA6Q8IY17 1366 aa28.99■■■□□ 2.23
CRNDE-210ENST00000560912 AFF2P51816 1311 aa28.97■■■□□ 2.23
CRNDE-210ENST00000560912 RXRBP28702 533 aa28.97■■■□□ 2.23
CRNDE-210ENST00000560912 LRRC59Q96AG4 307 aaKnown RBP28.96■■■□□ 2.23
CRNDE-210ENST00000560912 C1orf167Q5SNV9 1468 aa28.96■■■□□ 2.23
CRNDE-210ENST00000560912 DDX17Q92841 729 aaKnown RBP28.93■■■□□ 2.22
CRNDE-210ENST00000560912 ROBO2Q9HCK4 1378 aa28.91■■■□□ 2.22
CRNDE-210ENST00000560912 RGS12O14924 1447 aa28.9■■■□□ 2.22
CRNDE-210ENST00000560912 HFM1A2PYH4 1435 aa28.88■■■□□ 2.21
CRNDE-210ENST00000560912 COL22A1Q8NFW1 1626 aaPredicted RBP28.88■■■□□ 2.21
CRNDE-210ENST00000560912 CDC42BPGQ6DT37 1551 aa28.85■■■□□ 2.21
CRNDE-210ENST00000560912 VGFO15240 615 aaPredicted RBP28.85■■■□□ 2.21
CRNDE-210ENST00000560912 C8orf37Q96NL8 207 aa28.85■■■□□ 2.21
CRNDE-210ENST00000560912 SOS2Q07890 1332 aaPredicted RBP28.83■■■□□ 2.21
CRNDE-210ENST00000560912 IFT172Q9UG01 1749 aa28.83■■■□□ 2.21
CRNDE-210ENST00000560912 RPGRIP1LQ68CZ1 1315 aa28.82■■■□□ 2.2
CRNDE-210ENST00000560912 MARF1Q9Y4F3 1742 aaKnown RBP28.8■■■□□ 2.2
CRNDE-210ENST00000560912 RBM6P78332 1123 aaKnown RBP28.8■■■□□ 2.2
CRNDE-210ENST00000560912 ORAI2Q96SN7 254 aa28.79■■■□□ 2.2
CRNDE-210ENST00000560912 QTRT2Q9H974 415 aaKnown RBP28.79■■■□□ 2.2
CRNDE-210ENST00000560912 KNDC1Q76NI1 1749 aa28.77■■■□□ 2.2
CRNDE-210ENST00000560912 ADAMTS2O95450 1211 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms