RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ARHGEF11O15085 1522 aa8.69□□□□□ -1.02
ZEB1-220ENST00000560909 RANGAP1P46060 587 aaPredicted RBP8.68□□□□□ -1.02
ZEB1-220ENST00000560909 CASKIN1Q8WXD9 1431 aa8.68□□□□□ -1.02
ZEB1-220ENST00000560909 UHRF1BP1LA0JNW5 1464 aa8.67□□□□□ -1.02
ZEB1-220ENST00000560909 VASPP50552 380 aaPredicted RBP8.67□□□□□ -1.02
ZEB1-220ENST00000560909 ABCA8O94911 1581 aa8.66□□□□□ -1.02
ZEB1-220ENST00000560909 UACAQ9BZF9 1416 aa8.66□□□□□ -1.02
ZEB1-220ENST00000560909 DGAT1O75907 488 aa8.66□□□□□ -1.02
ZEB1-220ENST00000560909 RABGEF1Q9UJ41 708 aa8.65□□□□□ -1.02
ZEB1-220ENST00000560909 FYCO1Q9BQS8 1478 aa8.64□□□□□ -1.03
ZEB1-220ENST00000560909 NFX1Q12986 1120 aaKnown RBP8.64□□□□□ -1.03
ZEB1-220ENST00000560909 ZFRQ96KR1 1074 aaKnown RBP8.64□□□□□ -1.03
ZEB1-220ENST00000560909 MAP3K1Q13233 1512 aa8.64□□□□□ -1.03
ZEB1-220ENST00000560909 PLB1Q6P1J6 1458 aa8.64□□□□□ -1.03
ZEB1-220ENST00000560909 RIMBP3CA6NJZ7 1639 aa8.63□□□□□ -1.03
ZEB1-220ENST00000560909 RIMBP3BA6NNM3 1639 aa8.63□□□□□ -1.03
ZEB1-220ENST00000560909 RIMBP3Q9UFD9 1639 aa8.63□□□□□ -1.03
ZEB1-220ENST00000560909 NUP153P49790 1475 aaKnown RBP8.63□□□□□ -1.03
ZEB1-220ENST00000560909 TRIM67Q6ZTA4 783 aa8.62□□□□□ -1.03
ZEB1-220ENST00000560909 LAPTM4BQ86VI4 370 aa8.62□□□□□ -1.03
ZEB1-220ENST00000560909 SPOCK2Q92563 424 aa8.62□□□□□ -1.03
ZEB1-220ENST00000560909 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.62□□□□□ -1.03
ZEB1-220ENST00000560909 ABCC2Q92887 1545 aa8.62□□□□□ -1.03
ZEB1-220ENST00000560909 KDM5BQ9UGL1 1544 aa8.61□□□□□ -1.03
ZEB1-220ENST00000560909 PLPP6Q8IY26 295 aa8.61□□□□□ -1.03
ZEB1-220ENST00000560909 MFRPQ9BY79 579 aa8.61□□□□□ -1.03
ZEB1-220ENST00000560909 ATP10BO94823 1461 aa8.61□□□□□ -1.03
ZEB1-220ENST00000560909 FOSBP53539 338 aa8.6□□□□□ -1.03
ZEB1-220ENST00000560909 CYB5RLQ6IPT4 315 aa8.6□□□□□ -1.03
ZEB1-220ENST00000560909 EPRSP07814 1512 aaKnown RBP8.59□□□□□ -1.03
ZEB1-220ENST00000560909 RAPGEF6Q8TEU7 1601 aa8.59□□□□□ -1.03
ZEB1-220ENST00000560909 RIOK3O14730 519 aaKnown RBP8.59□□□□□ -1.03
ZEB1-220ENST00000560909 TJAP1Q5JTD0 557 aa8.59□□□□□ -1.03
ZEB1-220ENST00000560909 TSR3Q9UJK0 312 aaKnown RBP8.59□□□□□ -1.03
ZEB1-220ENST00000560909 HPS5Q9UPZ3 1129 aa8.59□□□□□ -1.03
ZEB1-220ENST00000560909 PCF11O94913 1555 aaKnown RBP8.59□□□□□ -1.03
ZEB1-220ENST00000560909 CCDC18Q5T9S5 1454 aa8.58□□□□□ -1.04
ZEB1-220ENST00000560909 FAM181BA6NEQ2 426 aa8.58□□□□□ -1.04
ZEB1-220ENST00000560909 PROX2Q3B8N5 592 aa8.58□□□□□ -1.04
ZEB1-220ENST00000560909 ADCY10Q96PN6 1610 aa8.58□□□□□ -1.04
ZEB1-220ENST00000560909 VGFO15240 615 aaPredicted RBP8.57□□□□□ -1.04
ZEB1-220ENST00000560909 ST8SIA5O15466 376 aa8.57□□□□□ -1.04
ZEB1-220ENST00000560909 HECW1Q76N89 1606 aa8.57□□□□□ -1.04
ZEB1-220ENST00000560909 FOXK1P85037 733 aa8.56□□□□□ -1.04
ZEB1-220ENST00000560909 ADAM33Q9BZ11 813 aa8.56□□□□□ -1.04
ZEB1-220ENST00000560909 TTBK1Q5TCY1 1321 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-220ENST00000560909 KANK4Q5T7N3 995 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-220ENST00000560909 CDK11AQ9UQ88 783 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-220ENST00000560909 TIAM1Q13009 1591 aa8.55□□□□□ -1.04
ZEB1-220ENST00000560909 LRRC9Q6ZRR7 1453 aa8.54□□□□□ -1.04
ZEB1-220ENST00000560909 CDK13Q14004 1512 aaKnown RBP8.54□□□□□ -1.04
ZEB1-220ENST00000560909 TROQ12816 1431 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-220ENST00000560909 PLEKHD1A6NEE1 506 aa8.53□□□□□ -1.04
ZEB1-220ENST00000560909 FAM187AA6NFU0 413 aa8.53□□□□□ -1.04
ZEB1-220ENST00000560909 AAASQ9NRG9 546 aa8.53□□□□□ -1.04
ZEB1-220ENST00000560909 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.53□□□□□ -1.04
ZEB1-220ENST00000560909 LCE2CQ5TA81 110 aa8.52□□□□□ -1.05
ZEB1-220ENST00000560909 RNF25Q96BH1 459 aaPredicted RBP8.52□□□□□ -1.05
ZEB1-220ENST00000560909 ATP1B4Q9UN42 357 aaPredicted RBP8.52□□□□□ -1.05
ZEB1-220ENST00000560909 MAPKBP1O60336 1514 aa8.52□□□□□ -1.05
ZEB1-220ENST00000560909 MAGI3Q5TCQ9 1506 aa8.52□□□□□ -1.05
ZEB1-220ENST00000560909 LRRIQ1Q96JM4 1722 aa8.51□□□□□ -1.05
ZEB1-220ENST00000560909 PPP1R3GB7ZBB8 358 aa8.51□□□□□ -1.05
ZEB1-220ENST00000560909 ZDHHC16Q969W1 377 aa8.51□□□□□ -1.05
ZEB1-220ENST00000560909 ASXL2Q76L83 1435 aa8.51□□□□□ -1.05
ZEB1-220ENST00000560909 MTUS2Q5JR59 1369 aa8.5□□□□□ -1.05
ZEB1-220ENST00000560909 CFAP43Q8NDM7 1665 aa8.5□□□□□ -1.05
ZEB1-220ENST00000560909 LRCH3Q96II8 777 aa8.5□□□□□ -1.05
ZEB1-220ENST00000560909 IL21Q9HBE4 155 aa8.5□□□□□ -1.05
ZEB1-220ENST00000560909 ZCCHC11Q5TAX3 1644 aaKnown RBP8.5□□□□□ -1.05
ZEB1-220ENST00000560909 WDR7Q9Y4E6 1490 aa8.5□□□□□ -1.05
ZEB1-220ENST00000560909 ARID3CA6NKF2 412 aa8.49□□□□□ -1.05
ZEB1-220ENST00000560909 MTRQ99707 1265 aa8.49□□□□□ -1.05
ZEB1-220ENST00000560909 SEPT9Q9UHD8 586 aaPredicted RBP8.49□□□□□ -1.05
ZEB1-220ENST00000560909 ABCC10Q5T3U5 1492 aa8.49□□□□□ -1.05
ZEB1-220ENST00000560909 EHBP1L1Q8N3D4 1523 aa8.49□□□□□ -1.05
ZEB1-220ENST00000560909 UPF1Q92900 1129 aaKnown RBP eCLIP8.48□□□□□ -1.05
ZEB1-220ENST00000560909 KIAA1468Q9P260 1216 aa8.48□□□□□ -1.05
ZEB1-220ENST00000560909 DSG2Q14126 1118 aa8.47□□□□□ -1.05
ZEB1-220ENST00000560909 OXER1Q8TDS5 423 aa8.47□□□□□ -1.05
ZEB1-220ENST00000560909 BCL11BQ9C0K0 894 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-220ENST00000560909 NCOA2Q15596 1464 aa8.46□□□□□ -1.05
ZEB1-220ENST00000560909 C11orf95C9JLR9 678 aaPredicted RBP8.46□□□□□ -1.06
ZEB1-220ENST00000560909 PRR20EP86478 221 aa8.46□□□□□ -1.06
ZEB1-220ENST00000560909 PRR20CP86479 221 aa8.46□□□□□ -1.06
ZEB1-220ENST00000560909 PRR20DP86480 221 aa8.46□□□□□ -1.06
ZEB1-220ENST00000560909 PRR20BP86481 221 aa8.46□□□□□ -1.06
ZEB1-220ENST00000560909 PRR20AP86496 221 aa8.46□□□□□ -1.06
ZEB1-220ENST00000560909 KRTAP4-8Q9BYQ9 185 aa8.46□□□□□ -1.06
ZEB1-220ENST00000560909 PHLDB1Q86UU1 1377 aa8.46□□□□□ -1.06
ZEB1-220ENST00000560909 GLI2P10070 1586 aa8.45□□□□□ -1.06
ZEB1-220ENST00000560909 ZNF516Q92618 1163 aa8.45□□□□□ -1.06
ZEB1-220ENST00000560909 GPATCH8Q9UKJ3 1502 aaKnown RBP8.44□□□□□ -1.06
ZEB1-220ENST00000560909 COL9A1P20849 921 aa8.44□□□□□ -1.06
ZEB1-220ENST00000560909 GGCXP38435 758 aa8.44□□□□□ -1.06
ZEB1-220ENST00000560909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.44□□□□□ -1.06
ZEB1-220ENST00000560909 PLCH2O75038 1416 aa8.44□□□□□ -1.06
ZEB1-220ENST00000560909 MIA2Q96PC5 1412 aa8.44□□□□□ -1.06
ZEB1-220ENST00000560909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
ZEB1-220ENST00000560909 ARAP3Q8WWN8 1544 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms