RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 ABCC5O15440 1437 aa11.92□□□□□ -0.5
APH1B-209ENST00000560716 ZFYVE9O95405 1425 aa11.92□□□□□ -0.5
APH1B-209ENST00000560716 VPS8Q8N3P4 1428 aa11.92□□□□□ -0.5
APH1B-209ENST00000560716 MSH6P52701 1360 aa11.92□□□□□ -0.5
APH1B-209ENST00000560716 SPATA31A6Q5VVP1 1343 aa11.91□□□□□ -0.5
APH1B-209ENST00000560716 SLAIN2Q9P270 581 aa11.91□□□□□ -0.5
APH1B-209ENST00000560716 LRP6O75581 1613 aa11.9□□□□□ -0.5
APH1B-209ENST00000560716 DIP2AQ14689 1571 aa11.9□□□□□ -0.5
APH1B-209ENST00000560716 PROSER2Q86WR7 435 aaPredicted RBP11.9□□□□□ -0.5
APH1B-209ENST00000560716 SLC52A1Q9NWF4 448 aa11.9□□□□□ -0.5
APH1B-209ENST00000560716 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.9□□□□□ -0.5
APH1B-209ENST00000560716 KANK1Q14678 1352 aa11.9□□□□□ -0.5
APH1B-209ENST00000560716 PLEKHG1Q9ULL1 1385 aa11.9□□□□□ -0.5
APH1B-209ENST00000560716 TMEM131LA2VDJ0 1609 aa11.89□□□□□ -0.51
APH1B-209ENST00000560716 PTPN23Q9H3S7 1636 aa11.89□□□□□ -0.51
APH1B-209ENST00000560716 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
APH1B-209ENST00000560716 GCC2Q8IWJ2 1684 aa11.88□□□□□ -0.51
APH1B-209ENST00000560716 PIK3R4Q99570 1358 aa11.88□□□□□ -0.51
APH1B-209ENST00000560716 DAPK1P53355 1430 aa11.87□□□□□ -0.51
APH1B-209ENST00000560716 ZNF772Q68DY9 489 aaPredicted RBP11.87□□□□□ -0.51
APH1B-209ENST00000560716 ADGRL2O95490 1459 aa11.87□□□□□ -0.51
APH1B-209ENST00000560716 SLC26A8Q96RN1 970 aa11.86□□□□□ -0.51
APH1B-209ENST00000560716 TBX22Q9Y458 520 aa11.86□□□□□ -0.51
APH1B-209ENST00000560716 NHSL1Q5SYE7 1610 aa11.86□□□□□ -0.51
APH1B-209ENST00000560716 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
APH1B-209ENST00000560716 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
APH1B-209ENST00000560716 DCCP43146 1447 aa11.84□□□□□ -0.51
APH1B-209ENST00000560716 ADAMTS13Q76LX8 1427 aa11.83□□□□□ -0.52
APH1B-209ENST00000560716 LAMC1P11047 1609 aa11.82□□□□□ -0.52
APH1B-209ENST00000560716 ANKRD30AQ9BXX3 1397 aa11.82□□□□□ -0.52
APH1B-209ENST00000560716 HDGFP51858 240 aaKnown RBP11.82□□□□□ -0.52
APH1B-209ENST00000560716 CADPS2Q86UW7 1296 aa11.82□□□□□ -0.52
APH1B-209ENST00000560716 RRP7BPQ9NSQ0 103 aa11.82□□□□□ -0.52
APH1B-209ENST00000560716 SETD5Q9C0A6 1442 aa11.82□□□□□ -0.52
APH1B-209ENST00000560716 XRN1Q8IZH2 1706 aaKnown RBP11.81□□□□□ -0.52
APH1B-209ENST00000560716 UNC13BO14795 1591 aa11.81□□□□□ -0.52
APH1B-209ENST00000560716 RIMS2Q9UQ26 1411 aa11.81□□□□□ -0.52
APH1B-209ENST00000560716 C19orf44Q9H6X5 657 aa11.81□□□□□ -0.52
APH1B-209ENST00000560716 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
APH1B-209ENST00000560716 TRPM2O94759 1503 aa11.8□□□□□ -0.52
APH1B-209ENST00000560716 E9PCH4 1651 aa11.78□□□□□ -0.52
APH1B-209ENST00000560716 MSH5O43196 834 aa11.78□□□□□ -0.52
APH1B-209ENST00000560716 RXRBP28702 533 aa11.78□□□□□ -0.52
APH1B-209ENST00000560716 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.78□□□□□ -0.52
APH1B-209ENST00000560716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.52
APH1B-209ENST00000560716 IQGAP3Q86VI3 1631 aa11.78□□□□□ -0.52
APH1B-209ENST00000560716 NRXN3Q9Y4C0 1643 aa11.78□□□□□ -0.52
APH1B-209ENST00000560716 ASXL1Q8IXJ9 1541 aa11.77□□□□□ -0.52
APH1B-209ENST00000560716 SETBP1Q9Y6X0 1596 aa11.76□□□□□ -0.53
APH1B-209ENST00000560716 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
APH1B-209ENST00000560716 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
APH1B-209ENST00000560716 BRINP3Q76B58 766 aa11.75□□□□□ -0.53
APH1B-209ENST00000560716 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
APH1B-209ENST00000560716 PTPRUQ92729 1446 aa11.75□□□□□ -0.53
APH1B-209ENST00000560716 ANKRD50Q9ULJ7 1429 aa11.75□□□□□ -0.53
APH1B-209ENST00000560716 ATF3P18847 181 aa11.74□□□□□ -0.53
APH1B-209ENST00000560716 RGS12O14924 1447 aa11.74□□□□□ -0.53
APH1B-209ENST00000560716 MST1RQ04912 1400 aa11.74□□□□□ -0.53
APH1B-209ENST00000560716 MEX3CQ5U5Q3 659 aaKnown RBP11.73□□□□□ -0.53
APH1B-209ENST00000560716 TRIM52Q96A61 297 aa11.73□□□□□ -0.53
APH1B-209ENST00000560716 RBM6P78332 1123 aaKnown RBP11.72□□□□□ -0.53
APH1B-209ENST00000560716 COL22A1Q8NFW1 1626 aaPredicted RBP11.71□□□□□ -0.53
APH1B-209ENST00000560716 AFF2P51816 1311 aa11.71□□□□□ -0.53
APH1B-209ENST00000560716 LRRC59Q96AG4 307 aaKnown RBP11.71□□□□□ -0.53
APH1B-209ENST00000560716 NALCNQ8IZF0 1738 aa11.71□□□□□ -0.54
APH1B-209ENST00000560716 PRAG1Q86YV5 1406 aa11.7□□□□□ -0.54
APH1B-209ENST00000560716 PNPLA6Q8IY17 1366 aa11.7□□□□□ -0.54
APH1B-209ENST00000560716 MARF1Q9Y4F3 1742 aaKnown RBP11.7□□□□□ -0.54
APH1B-209ENST00000560716 PPP1R15AO75807 674 aaPredicted RBP11.7□□□□□ -0.54
APH1B-209ENST00000560716 BCANQ96GW7 911 aa11.69□□□□□ -0.54
APH1B-209ENST00000560716 AMOTL2Q9Y2J4 779 aa11.69□□□□□ -0.54
APH1B-209ENST00000560716 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
APH1B-209ENST00000560716 ADGRL3Q9HAR2 1447 aa11.69□□□□□ -0.54
APH1B-209ENST00000560716 SRCAPQ6ZRS2 3230 aa11.68□□□□□ -0.54
APH1B-209ENST00000560716 QTRT2Q9H974 415 aaKnown RBP11.67□□□□□ -0.54
APH1B-209ENST00000560716 CHIC2Q9UKJ5 165 aa11.67□□□□□ -0.54
APH1B-209ENST00000560716 PTCH1Q13635 1447 aa11.67□□□□□ -0.54
APH1B-209ENST00000560716 ROCK1Q13464 1354 aa11.67□□□□□ -0.54
APH1B-209ENST00000560716 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
APH1B-209ENST00000560716 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.66□□□□□ -0.54
APH1B-209ENST00000560716 C14orf37Q86TY3 774 aa11.66□□□□□ -0.54
APH1B-209ENST00000560716 NGLY1Q96IV0 654 aa11.66□□□□□ -0.54
APH1B-209ENST00000560716 EP400Q96L91 3159 aa11.65□□□□□ -0.54
APH1B-209ENST00000560716 FNBP4Q8N3X1 1017 aaPredicted RBP11.65□□□□□ -0.54
APH1B-209ENST00000560716 SOS2Q07890 1332 aaPredicted RBP11.64□□□□□ -0.55
APH1B-209ENST00000560716 ATRNO75882 1429 aa11.64□□□□□ -0.55
APH1B-209ENST00000560716 CCDC125Q86Z20 511 aa11.64□□□□□ -0.55
APH1B-209ENST00000560716 NUTM2BA6NNL0 878 aaPredicted RBP11.63□□□□□ -0.55
APH1B-209ENST00000560716 NUTM2EB1AL46 878 aaPredicted RBP11.63□□□□□ -0.55
APH1B-209ENST00000560716 NUTM2AQ8IVF1 878 aaPredicted RBP11.63□□□□□ -0.55
APH1B-209ENST00000560716 NEXMIFQ5QGS0 1516 aa11.63□□□□□ -0.55
APH1B-209ENST00000560716 C1orf167Q5SNV9 1468 aa11.63□□□□□ -0.55
APH1B-209ENST00000560716 CNKSR2Q8WXI2 1034 aa11.62□□□□□ -0.55
APH1B-209ENST00000560716 METP08581 1390 aa11.62□□□□□ -0.55
APH1B-209ENST00000560716 KIF1BO60333 1816 aa11.62□□□□□ -0.55
APH1B-209ENST00000560716 LRP5O75197 1615 aa11.61□□□□□ -0.55
APH1B-209ENST00000560716 C8orf37Q96NL8 207 aa11.61□□□□□ -0.55
APH1B-209ENST00000560716 TRPC5Q9UL62 973 aaPredicted RBP11.61□□□□□ -0.55
APH1B-209ENST00000560716 MYOM2P54296 1465 aa11.61□□□□□ -0.55
APH1B-209ENST00000560716 APLP2Q06481 763 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms