RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 MYO5BQ9ULV0 1848 aa16.35■□□□□ 0.21
SNRPCP18-201ENST00000560619 LTKP29376 864 aa16.33■□□□□ 0.2
SNRPCP18-201ENST00000560619 RIMS2Q9UQ26 1411 aa16.33■□□□□ 0.2
SNRPCP18-201ENST00000560619 NPHP4O75161 1426 aaPredicted RBP16.32■□□□□ 0.2
SNRPCP18-201ENST00000560619 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
SNRPCP18-201ENST00000560619 SPATA31E1Q6ZUB1 1445 aa16.31■□□□□ 0.2
SNRPCP18-201ENST00000560619 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
SNRPCP18-201ENST00000560619 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
SNRPCP18-201ENST00000560619 PLEKHG1Q9ULL1 1385 aa16.3■□□□□ 0.2
SNRPCP18-201ENST00000560619 VGFO15240 615 aaPredicted RBP16.29■□□□□ 0.2
SNRPCP18-201ENST00000560619 DHX57Q6P158 1386 aaKnown RBP16.28■□□□□ 0.2
SNRPCP18-201ENST00000560619 ZNF326Q5BKZ1 582 aaKnown RBP16.28■□□□□ 0.2
SNRPCP18-201ENST00000560619 NEXMIFQ5QGS0 1516 aa16.28■□□□□ 0.2
SNRPCP18-201ENST00000560619 PPP1R15AO75807 674 aaPredicted RBP16.25■□□□□ 0.19
SNRPCP18-201ENST00000560619 TBX22Q9Y458 520 aa16.25■□□□□ 0.19
SNRPCP18-201ENST00000560619 PPLO60437 1756 aa16.25■□□□□ 0.19
SNRPCP18-201ENST00000560619 DIP2AQ14689 1571 aa16.24■□□□□ 0.19
SNRPCP18-201ENST00000560619 SETBP1Q9Y6X0 1596 aa16.23■□□□□ 0.19
SNRPCP18-201ENST00000560619 PIK3R4Q99570 1358 aa16.23■□□□□ 0.19
SNRPCP18-201ENST00000560619 IFT172Q9UG01 1749 aa16.22■□□□□ 0.19
SNRPCP18-201ENST00000560619 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
SNRPCP18-201ENST00000560619 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
SNRPCP18-201ENST00000560619 MYOM2P54296 1465 aa16.2■□□□□ 0.18
SNRPCP18-201ENST00000560619 ADAMTS13Q76LX8 1427 aa16.19■□□□□ 0.18
SNRPCP18-201ENST00000560619 LTBP4Q8N2S1 1624 aa16.19■□□□□ 0.18
SNRPCP18-201ENST00000560619 CPS1P31327 1500 aa16.19■□□□□ 0.18
SNRPCP18-201ENST00000560619 NRXN1Q9ULB1 1477 aa16.18■□□□□ 0.18
SNRPCP18-201ENST00000560619 IQSEC2Q5JU85 1478 aa16.17■□□□□ 0.18
SNRPCP18-201ENST00000560619 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
SNRPCP18-201ENST00000560619 KCNA6P17658 529 aa16.17■□□□□ 0.18
SNRPCP18-201ENST00000560619 BCANQ96GW7 911 aa16.17■□□□□ 0.18
SNRPCP18-201ENST00000560619 NUTM2DQ5VT03 806 aaPredicted RBP16.16■□□□□ 0.18
SNRPCP18-201ENST00000560619 CHD2O14647 1828 aaKnown RBP16.16■□□□□ 0.18
SNRPCP18-201ENST00000560619 ZNF335Q9H4Z2 1342 aaPredicted RBP16.16■□□□□ 0.18
SNRPCP18-201ENST00000560619 SLC26A8Q96RN1 970 aa16.15■□□□□ 0.18
SNRPCP18-201ENST00000560619 NWD1Q149M9 1564 aa16.14■□□□□ 0.17
SNRPCP18-201ENST00000560619 PIK3C2GO75747 1445 aa16.14■□□□□ 0.17
SNRPCP18-201ENST00000560619 CCER1Q8TC90 406 aaPredicted RBP16.14■□□□□ 0.17
SNRPCP18-201ENST00000560619 ADGRF5Q8IZF2 1346 aa16.14■□□□□ 0.17
SNRPCP18-201ENST00000560619 NKTRP30414 1462 aaKnown RBP16.13■□□□□ 0.17
SNRPCP18-201ENST00000560619 ALKQ9UM73 1620 aa16.12■□□□□ 0.17
SNRPCP18-201ENST00000560619 DCAF11Q8TEB1 546 aa16.12■□□□□ 0.17
SNRPCP18-201ENST00000560619 C14orf93Q9H972 538 aaKnown RBP16.12■□□□□ 0.17
SNRPCP18-201ENST00000560619 PRAG1Q86YV5 1406 aa16.11■□□□□ 0.17
SNRPCP18-201ENST00000560619 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
SNRPCP18-201ENST00000560619 SETD1AO15047 1707 aaKnown RBP16.11■□□□□ 0.17
SNRPCP18-201ENST00000560619 CERKQ8TCT0 537 aa16.11■□□□□ 0.17
SNRPCP18-201ENST00000560619 SIN3AQ96ST3 1273 aa16.11■□□□□ 0.17
SNRPCP18-201ENST00000560619 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
SNRPCP18-201ENST00000560619 LAMC1P11047 1609 aa16.11■□□□□ 0.17
SNRPCP18-201ENST00000560619 STRCP1A6NGW2 1772 aa16.1■□□□□ 0.17
SNRPCP18-201ENST00000560619 L3MBTL2Q969R5 705 aa16.07■□□□□ 0.16
SNRPCP18-201ENST00000560619 AMOTL2Q9Y2J4 779 aa16.07■□□□□ 0.16
SNRPCP18-201ENST00000560619 METP08581 1390 aa16.07■□□□□ 0.16
SNRPCP18-201ENST00000560619 LRRC7Q96NW7 1537 aa16.07■□□□□ 0.16
SNRPCP18-201ENST00000560619 XRN1Q8IZH2 1706 aaKnown RBP16.06■□□□□ 0.16
SNRPCP18-201ENST00000560619 KIAA1210Q9ULL0 1709 aa16.06■□□□□ 0.16
SNRPCP18-201ENST00000560619 NEUROD1Q13562 356 aa16.06■□□□□ 0.16
SNRPCP18-201ENST00000560619 SIRT1Q96EB6 747 aa16.06■□□□□ 0.16
SNRPCP18-201ENST00000560619 PTPRUQ92729 1446 aa16.05■□□□□ 0.16
SNRPCP18-201ENST00000560619 KDM2AQ9Y2K7 1162 aa16.05■□□□□ 0.16
SNRPCP18-201ENST00000560619 TECPR2O15040 1411 aa16.04■□□□□ 0.16
SNRPCP18-201ENST00000560619 ABCC11Q96J66 1382 aa16.04■□□□□ 0.16
SNRPCP18-201ENST00000560619 PTCH1Q13635 1447 aa16.03■□□□□ 0.16
SNRPCP18-201ENST00000560619 LRPPRCP42704 1394 aaKnown RBP16.03■□□□□ 0.16
SNRPCP18-201ENST00000560619 TONSLQ96HA7 1378 aa16.03■□□□□ 0.16
SNRPCP18-201ENST00000560619 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
SNRPCP18-201ENST00000560619 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.16
SNRPCP18-201ENST00000560619 KNDC1Q76NI1 1749 aa16.01■□□□□ 0.15
SNRPCP18-201ENST00000560619 YTHDC2Q9H6S0 1430 aaKnown RBP16.01■□□□□ 0.15
SNRPCP18-201ENST00000560619 XIRP1Q702N8 1843 aaKnown RBP16.01■□□□□ 0.15
SNRPCP18-201ENST00000560619 TMEM94Q12767 1356 aa16■□□□□ 0.15
SNRPCP18-201ENST00000560619 ADGRB1O14514 1584 aa16■□□□□ 0.15
SNRPCP18-201ENST00000560619 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
SNRPCP18-201ENST00000560619 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
SNRPCP18-201ENST00000560619 FAM135BQ49AJ0 1406 aa15.99■□□□□ 0.15
SNRPCP18-201ENST00000560619 C19orf44Q9H6X5 657 aa15.98■□□□□ 0.15
SNRPCP18-201ENST00000560619 DLC1Q96QB1 1528 aa15.98■□□□□ 0.15
SNRPCP18-201ENST00000560619 TOM1O60784 492 aa15.97■□□□□ 0.15
SNRPCP18-201ENST00000560619 TMEM132EQ6IEE7 984 aa15.97■□□□□ 0.15
SNRPCP18-201ENST00000560619 FBXO41Q8TF61 875 aa15.97■□□□□ 0.15
SNRPCP18-201ENST00000560619 DCCP43146 1447 aa15.96■□□□□ 0.15
SNRPCP18-201ENST00000560619 MSH6P52701 1360 aa15.96■□□□□ 0.15
SNRPCP18-201ENST00000560619 ROBO2Q9HCK4 1378 aa15.95■□□□□ 0.14
SNRPCP18-201ENST00000560619 ZEB1P37275 1124 aaPredicted RBP15.94■□□□□ 0.14
SNRPCP18-201ENST00000560619 TRPM1Q7Z4N2 1603 aa15.94■□□□□ 0.14
SNRPCP18-201ENST00000560619 ADGRL3Q9HAR2 1447 aa15.94■□□□□ 0.14
SNRPCP18-201ENST00000560619 GPRASP1Q5JY77 1395 aa15.93■□□□□ 0.14
SNRPCP18-201ENST00000560619 CADPS2Q86UW7 1296 aa15.93■□□□□ 0.14
SNRPCP18-201ENST00000560619 STK26Q9P289 416 aa15.91■□□□□ 0.14
SNRPCP18-201ENST00000560619 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.91■□□□□ 0.14
SNRPCP18-201ENST00000560619 UBAP1LF5GYI3 381 aa15.9■□□□□ 0.14
SNRPCP18-201ENST00000560619 NBPF1Q3BBV0 1214 aa15.9■□□□□ 0.14
SNRPCP18-201ENST00000560619 NBPF8Q3BBV2 869 aa15.9■□□□□ 0.14
SNRPCP18-201ENST00000560619 ATF3P18847 181 aa15.89■□□□□ 0.13
SNRPCP18-201ENST00000560619 C14orf37Q86TY3 774 aa15.89■□□□□ 0.13
SNRPCP18-201ENST00000560619 RALGAPBQ86X10 1494 aa15.89■□□□□ 0.13
SNRPCP18-201ENST00000560619 ROCK2O75116 1388 aaKnown RBP15.88■□□□□ 0.13
SNRPCP18-201ENST00000560619 WAPLQ7Z5K2 1190 aa15.87■□□□□ 0.13
SNRPCP18-201ENST00000560619 POGKQ9P215 609 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms