RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 ITGAEP38570 1179 aa27.46■■□□□ 1.99
RPL28-210ENST00000560583 SLC26A8Q96RN1 970 aa27.46■■□□□ 1.99
RPL28-210ENST00000560583 RIMS2Q9UQ26 1411 aa27.46■■□□□ 1.99
RPL28-210ENST00000560583 NKTRP30414 1462 aaKnown RBP27.44■■□□□ 1.98
RPL28-210ENST00000560583 RRBP1Q9P2E9 1410 aaKnown RBP27.44■■□□□ 1.98
RPL28-210ENST00000560583 CHD2O14647 1828 aaKnown RBP27.44■■□□□ 1.98
RPL28-210ENST00000560583 SPHKAPQ2M3C7 1700 aa27.43■■□□□ 1.98
RPL28-210ENST00000560583 TMEM94Q12767 1356 aa27.43■■□□□ 1.98
RPL28-210ENST00000560583 PLEKHG1Q9ULL1 1385 aa27.43■■□□□ 1.98
RPL28-210ENST00000560583 NUP155O75694 1391 aa27.42■■□□□ 1.98
RPL28-210ENST00000560583 KCNA6P17658 529 aa27.41■■□□□ 1.98
RPL28-210ENST00000560583 SOCS7O14512 581 aa27.38■■□□□ 1.97
RPL28-210ENST00000560583 SENP3Q9H4L4 574 aaPredicted RBP27.36■■□□□ 1.97
RPL28-210ENST00000560583 ROBO1Q9Y6N7 1651 aa27.35■■□□□ 1.97
RPL28-210ENST00000560583 DIP2AQ14689 1571 aa27.35■■□□□ 1.97
RPL28-210ENST00000560583 ADAMTS13Q76LX8 1427 aa27.34■■□□□ 1.97
RPL28-210ENST00000560583 RBM33Q96EV2 1170 aaKnown RBP27.33■■□□□ 1.97
RPL28-210ENST00000560583 PPP1R15AO75807 674 aaPredicted RBP27.31■■□□□ 1.96
RPL28-210ENST00000560583 CHGAP10645 457 aaKnown RBP27.31■■□□□ 1.96
RPL28-210ENST00000560583 NAIPQ13075 1403 aa27.31■■□□□ 1.96
RPL28-210ENST00000560583 FAM135BQ49AJ0 1406 aa27.31■■□□□ 1.96
RPL28-210ENST00000560583 NRXN3Q9Y4C0 1643 aa27.3■■□□□ 1.96
RPL28-210ENST00000560583 PROSER2Q86WR7 435 aaPredicted RBP27.3■■□□□ 1.96
RPL28-210ENST00000560583 BCANQ96GW7 911 aa27.3■■□□□ 1.96
RPL28-210ENST00000560583 CLTCL1P53675 1640 aa27.29■■□□□ 1.96
RPL28-210ENST00000560583 NUTM2DQ5VT03 806 aaPredicted RBP27.27■■□□□ 1.96
RPL28-210ENST00000560583 TRPM2O94759 1503 aa27.26■■□□□ 1.96
RPL28-210ENST00000560583 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.26■■□□□ 1.95
RPL28-210ENST00000560583 HDGFP51858 240 aaKnown RBP27.25■■□□□ 1.95
RPL28-210ENST00000560583 TBX22Q9Y458 520 aa27.25■■□□□ 1.95
RPL28-210ENST00000560583 SETBP1Q9Y6X0 1596 aa27.23■■□□□ 1.95
RPL28-210ENST00000560583 MSH6P52701 1360 aa27.22■■□□□ 1.95
RPL28-210ENST00000560583 XRN1Q8IZH2 1706 aaKnown RBP27.21■■□□□ 1.95
RPL28-210ENST00000560583 PIK3R4Q99570 1358 aa27.21■■□□□ 1.95
RPL28-210ENST00000560583 HFM1A2PYH4 1435 aa27.2■■□□□ 1.94
RPL28-210ENST00000560583 NEXMIFQ5QGS0 1516 aa27.2■■□□□ 1.94
RPL28-210ENST00000560583 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.19■■□□□ 1.94
RPL28-210ENST00000560583 PTPRUQ92729 1446 aa27.19■■□□□ 1.94
RPL28-210ENST00000560583 KIF1BO60333 1816 aa27.18■■□□□ 1.94
RPL28-210ENST00000560583 PHLPP1O60346 1717 aa27.17■■□□□ 1.94
RPL28-210ENST00000560583 NCOA3Q9Y6Q9 1424 aa27.16■■□□□ 1.94
RPL28-210ENST00000560583 COL16A1Q07092 1604 aaPredicted RBP27.12■■□□□ 1.93
RPL28-210ENST00000560583 PHF23Q9BUL5 403 aaPredicted RBP27.12■■□□□ 1.93
RPL28-210ENST00000560583 SLAIN2Q9P270 581 aa27.1■■□□□ 1.93
RPL28-210ENST00000560583 SETD1AO15047 1707 aaKnown RBP27.1■■□□□ 1.93
RPL28-210ENST00000560583 ZNF326Q5BKZ1 582 aaKnown RBP27.06■■□□□ 1.92
RPL28-210ENST00000560583 AMOTL2Q9Y2J4 779 aa27.06■■□□□ 1.92
RPL28-210ENST00000560583 METP08581 1390 aa27.06■■□□□ 1.92
RPL28-210ENST00000560583 AHDC1Q5TGY3 1603 aaPredicted RBP27.05■■□□□ 1.92
RPL28-210ENST00000560583 RGS17Q9UGC6 210 aaPredicted RBP27.05■■□□□ 1.92
RPL28-210ENST00000560583 PPLO60437 1756 aa27.04■■□□□ 1.92
RPL28-210ENST00000560583 NALCNQ8IZF0 1738 aa27.03■■□□□ 1.92
RPL28-210ENST00000560583 C14orf37Q86TY3 774 aa27.02■■□□□ 1.92
RPL28-210ENST00000560583 DCCP43146 1447 aa27.01■■□□□ 1.91
RPL28-210ENST00000560583 C19orf44Q9H6X5 657 aa27.01■■□□□ 1.91
RPL28-210ENST00000560583 TRIM52Q96A61 297 aa27■■□□□ 1.91
RPL28-210ENST00000560583 CADPS2Q86UW7 1296 aa26.99■■□□□ 1.91
RPL28-210ENST00000560583 SHPRHQ149N8 1683 aa26.97■■□□□ 1.91
RPL28-210ENST00000560583 JCADQ9P266 1359 aa26.97■■□□□ 1.91
RPL28-210ENST00000560583 SLC4A1APQ9BWU0 796 aaKnown RBP26.96■■□□□ 1.91
RPL28-210ENST00000560583 NHSL1Q5SYE7 1610 aa26.95■■□□□ 1.91
RPL28-210ENST00000560583 MST1RQ04912 1400 aa26.95■■□□□ 1.9
RPL28-210ENST00000560583 ASXL1Q8IXJ9 1541 aa26.95■■□□□ 1.9
RPL28-210ENST00000560583 ADGRL3Q9HAR2 1447 aa26.94■■□□□ 1.9
RPL28-210ENST00000560583 ATF3P18847 181 aa26.94■■□□□ 1.9
RPL28-210ENST00000560583 LRP6O75581 1613 aa26.94■■□□□ 1.9
RPL28-210ENST00000560583 IFT172Q9UG01 1749 aa26.93■■□□□ 1.9
RPL28-210ENST00000560583 PTCH1Q13635 1447 aa26.9■■□□□ 1.9
RPL28-210ENST00000560583 PRAG1Q86YV5 1406 aa26.9■■□□□ 1.9
RPL28-210ENST00000560583 BRINP3Q76B58 766 aa26.9■■□□□ 1.9
RPL28-210ENST00000560583 FOXD1Q16676 465 aa26.89■■□□□ 1.9
RPL28-210ENST00000560583 POTEAQ6S8J7 498 aa26.87■■□□□ 1.89
RPL28-210ENST00000560583 RPGRIP1LQ68CZ1 1315 aa26.86■■□□□ 1.89
RPL28-210ENST00000560583 ROBO2Q9HCK4 1378 aa26.84■■□□□ 1.89
RPL28-210ENST00000560583 SPATA31E1Q6ZUB1 1445 aa26.84■■□□□ 1.89
RPL28-210ENST00000560583 VGFO15240 615 aaPredicted RBP26.84■■□□□ 1.89
RPL28-210ENST00000560583 CCDC144AA2RUR9 1427 aa26.83■■□□□ 1.89
RPL28-210ENST00000560583 LAMC1P11047 1609 aa26.81■■□□□ 1.88
RPL28-210ENST00000560583 SPATA31A6Q5VVP1 1343 aa26.81■■□□□ 1.88
RPL28-210ENST00000560583 SETD5Q9C0A6 1442 aa26.79■■□□□ 1.88
RPL28-210ENST00000560583 MPHOSPH9Q99550 1183 aa26.78■■□□□ 1.88
RPL28-210ENST00000560583 C1orf167Q5SNV9 1468 aa26.78■■□□□ 1.88
RPL28-210ENST00000560583 KNDC1Q76NI1 1749 aa26.76■■□□□ 1.87
RPL28-210ENST00000560583 ADGRF5Q8IZF2 1346 aa26.75■■□□□ 1.87
RPL28-210ENST00000560583 CDC42BPGQ6DT37 1551 aa26.74■■□□□ 1.87
RPL28-210ENST00000560583 DDX17Q92841 729 aaKnown RBP26.72■■□□□ 1.87
RPL28-210ENST00000560583 PIK3C2GO75747 1445 aa26.72■■□□□ 1.87
RPL28-210ENST00000560583 TECPR2O15040 1411 aa26.7■■□□□ 1.86
RPL28-210ENST00000560583 ANKRD30BQ9BXX2 1392 aa26.7■■□□□ 1.86
RPL28-210ENST00000560583 RGL3Q3MIN7 710 aa26.68■■□□□ 1.86
RPL28-210ENST00000560583 PNPLA6Q8IY17 1366 aa26.68■■□□□ 1.86
RPL28-210ENST00000560583 MEX3CQ5U5Q3 659 aaKnown RBP26.66■■□□□ 1.86
RPL28-210ENST00000560583 RAB3GAP2Q9H2M9 1393 aa26.65■■□□□ 1.86
RPL28-210ENST00000560583 NRXN1Q9ULB1 1477 aa26.64■■□□□ 1.86
RPL28-210ENST00000560583 LRPPRCP42704 1394 aaKnown RBP26.64■■□□□ 1.86
RPL28-210ENST00000560583 NUTM2BA6NNL0 878 aaPredicted RBP26.63■■□□□ 1.85
RPL28-210ENST00000560583 NUTM2EB1AL46 878 aaPredicted RBP26.63■■□□□ 1.85
RPL28-210ENST00000560583 NUTM2AQ8IVF1 878 aaPredicted RBP26.63■■□□□ 1.85
RPL28-210ENST00000560583 ORAI2Q96SN7 254 aa26.63■■□□□ 1.85
RPL28-210ENST00000560583 MYOM2P54296 1465 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms