RNA–Protein interactions for RNA: ENST00000560498.5

HMG20A-210, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-210ENST00000560498 GCC2Q8IWJ2 1684 aa25.33■■□□□ 1.65
HMG20A-210ENST00000560498 IQGAP3Q86VI3 1631 aa25.32■■□□□ 1.64
HMG20A-210ENST00000560498 E9PCH4 1651 aa25.32■■□□□ 1.64
HMG20A-210ENST00000560498 CHGAP10645 457 aaKnown RBP25.3■■□□□ 1.64
HMG20A-210ENST00000560498 BCANQ96GW7 911 aa25.29■■□□□ 1.64
HMG20A-210ENST00000560498 ZFYVE9O95405 1425 aa25.29■■□□□ 1.64
HMG20A-210ENST00000560498 KCNA6P17658 529 aa25.28■■□□□ 1.64
HMG20A-210ENST00000560498 TMEM131LA2VDJ0 1609 aa25.27■■□□□ 1.64
HMG20A-210ENST00000560498 RIMS2Q9UQ26 1411 aa25.27■■□□□ 1.64
HMG20A-210ENST00000560498 POTEAQ6S8J7 498 aa25.26■■□□□ 1.63
HMG20A-210ENST00000560498 NUTM2DQ5VT03 806 aaPredicted RBP25.25■■□□□ 1.63
HMG20A-210ENST00000560498 MYO5BQ9ULV0 1848 aa25.25■■□□□ 1.63
HMG20A-210ENST00000560498 RBM33Q96EV2 1170 aaKnown RBP25.24■■□□□ 1.63
HMG20A-210ENST00000560498 PPP1R15AO75807 674 aaPredicted RBP25.23■■□□□ 1.63
HMG20A-210ENST00000560498 HDGFP51858 240 aaKnown RBP25.23■■□□□ 1.63
HMG20A-210ENST00000560498 PLEKHG1Q9ULL1 1385 aa25.22■■□□□ 1.63
HMG20A-210ENST00000560498 NAIPQ13075 1403 aa25.21■■□□□ 1.63
HMG20A-210ENST00000560498 TMEM94Q12767 1356 aa25.21■■□□□ 1.63
HMG20A-210ENST00000560498 PROSER2Q86WR7 435 aaPredicted RBP25.21■■□□□ 1.63
HMG20A-210ENST00000560498 XIRP1Q702N8 1843 aaKnown RBP25.2■■□□□ 1.62
HMG20A-210ENST00000560498 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.19■■□□□ 1.62
HMG20A-210ENST00000560498 SETD1AO15047 1707 aaKnown RBP25.15■■□□□ 1.62
HMG20A-210ENST00000560498 TBX22Q9Y458 520 aa25.15■■□□□ 1.62
HMG20A-210ENST00000560498 NWD1Q149M9 1564 aa25.13■■□□□ 1.61
HMG20A-210ENST00000560498 ADAMTS13Q76LX8 1427 aa25.12■■□□□ 1.61
HMG20A-210ENST00000560498 TRIM52Q96A61 297 aa25.11■■□□□ 1.61
HMG20A-210ENST00000560498 HFM1A2PYH4 1435 aa25.11■■□□□ 1.61
HMG20A-210ENST00000560498 NKTRP30414 1462 aaKnown RBP25.1■■□□□ 1.61
HMG20A-210ENST00000560498 SPHKAPQ2M3C7 1700 aa25.08■■□□□ 1.61
HMG20A-210ENST00000560498 ZNF326Q5BKZ1 582 aaKnown RBP25.07■■□□□ 1.6
HMG20A-210ENST00000560498 FAM135BQ49AJ0 1406 aa25.06■■□□□ 1.6
HMG20A-210ENST00000560498 CHD2O14647 1828 aaKnown RBP25.06■■□□□ 1.6
HMG20A-210ENST00000560498 MSH6P52701 1360 aa25.03■■□□□ 1.6
HMG20A-210ENST00000560498 CLTCL1P53675 1640 aa25.02■■□□□ 1.6
HMG20A-210ENST00000560498 SLC4A1APQ9BWU0 796 aaKnown RBP25.02■■□□□ 1.6
HMG20A-210ENST00000560498 PIK3R4Q99570 1358 aa25.01■■□□□ 1.59
HMG20A-210ENST00000560498 PTPRUQ92729 1446 aa25.01■■□□□ 1.59
HMG20A-210ENST00000560498 TRPM2O94759 1503 aa25.01■■□□□ 1.59
HMG20A-210ENST00000560498 AMOTL2Q9Y2J4 779 aa25■■□□□ 1.59
HMG20A-210ENST00000560498 DIP2AQ14689 1571 aa25■■□□□ 1.59
HMG20A-210ENST00000560498 ROBO1Q9Y6N7 1651 aa25■■□□□ 1.59
HMG20A-210ENST00000560498 SLAIN2Q9P270 581 aa24.99■■□□□ 1.59
HMG20A-210ENST00000560498 FOXD1Q16676 465 aa24.96■■□□□ 1.59
HMG20A-210ENST00000560498 C14orf37Q86TY3 774 aa24.96■■□□□ 1.59
HMG20A-210ENST00000560498 NRXN3Q9Y4C0 1643 aa24.96■■□□□ 1.59
HMG20A-210ENST00000560498 NCOA3Q9Y6Q9 1424 aa24.95■■□□□ 1.58
HMG20A-210ENST00000560498 METP08581 1390 aa24.93■■□□□ 1.58
HMG20A-210ENST00000560498 SETBP1Q9Y6X0 1596 aa24.93■■□□□ 1.58
HMG20A-210ENST00000560498 NEXMIFQ5QGS0 1516 aa24.93■■□□□ 1.58
HMG20A-210ENST00000560498 UPF1Q92900 1129 aaKnown RBP eCLIP24.93■■□□□ 1.58
HMG20A-210ENST00000560498 C19orf44Q9H6X5 657 aa24.92■■□□□ 1.58
HMG20A-210ENST00000560498 KIF1BO60333 1816 aa24.89■■□□□ 1.57
HMG20A-210ENST00000560498 MPHOSPH9Q99550 1183 aa24.88■■□□□ 1.57
HMG20A-210ENST00000560498 PHLPP1O60346 1717 aa24.87■■□□□ 1.57
HMG20A-210ENST00000560498 ATF3P18847 181 aa24.87■■□□□ 1.57
HMG20A-210ENST00000560498 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
HMG20A-210ENST00000560498 VGFO15240 615 aaPredicted RBP24.85■■□□□ 1.57
HMG20A-210ENST00000560498 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.85■■□□□ 1.57
HMG20A-210ENST00000560498 XRN1Q8IZH2 1706 aaKnown RBP24.84■■□□□ 1.57
HMG20A-210ENST00000560498 RPGRIP1LQ68CZ1 1315 aa24.84■■□□□ 1.57
HMG20A-210ENST00000560498 JCADQ9P266 1359 aa24.83■■□□□ 1.57
HMG20A-210ENST00000560498 RGL3Q3MIN7 710 aa24.78■■□□□ 1.56
HMG20A-210ENST00000560498 SETD5Q9C0A6 1442 aa24.78■■□□□ 1.56
HMG20A-210ENST00000560498 BRINP3Q76B58 766 aa24.77■■□□□ 1.56
HMG20A-210ENST00000560498 CCDC144AA2RUR9 1427 aa24.77■■□□□ 1.56
HMG20A-210ENST00000560498 LRP6O75581 1613 aa24.76■■□□□ 1.55
HMG20A-210ENST00000560498 MEX3CQ5U5Q3 659 aaKnown RBP24.76■■□□□ 1.55
HMG20A-210ENST00000560498 DCCP43146 1447 aa24.75■■□□□ 1.55
HMG20A-210ENST00000560498 ZNF772Q68DY9 489 aaPredicted RBP24.74■■□□□ 1.55
HMG20A-210ENST00000560498 ADGRF5Q8IZF2 1346 aa24.74■■□□□ 1.55
HMG20A-210ENST00000560498 COL16A1Q07092 1604 aaPredicted RBP24.73■■□□□ 1.55
HMG20A-210ENST00000560498 SPATA31E1Q6ZUB1 1445 aa24.73■■□□□ 1.55
HMG20A-210ENST00000560498 SRCAPQ6ZRS2 3230 aa24.73■■□□□ 1.55
HMG20A-210ENST00000560498 PPLO60437 1756 aa24.72■■□□□ 1.55
HMG20A-210ENST00000560498 MST1RQ04912 1400 aa24.72■■□□□ 1.55
HMG20A-210ENST00000560498 ADGRL3Q9HAR2 1447 aa24.72■■□□□ 1.55
HMG20A-210ENST00000560498 ROBO2Q9HCK4 1378 aa24.72■■□□□ 1.55
HMG20A-210ENST00000560498 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
HMG20A-210ENST00000560498 AHDC1Q5TGY3 1603 aaPredicted RBP24.69■■□□□ 1.54
HMG20A-210ENST00000560498 SPATA31A6Q5VVP1 1343 aa24.68■■□□□ 1.54
HMG20A-210ENST00000560498 RXRBP28702 533 aa24.68■■□□□ 1.54
HMG20A-210ENST00000560498 PTCH1Q13635 1447 aa24.68■■□□□ 1.54
HMG20A-210ENST00000560498 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
HMG20A-210ENST00000560498 NALCNQ8IZF0 1738 aa24.66■■□□□ 1.54
HMG20A-210ENST00000560498 ASXL1Q8IXJ9 1541 aa24.66■■□□□ 1.54
HMG20A-210ENST00000560498 DDX17Q92841 729 aaKnown RBP24.65■■□□□ 1.54
HMG20A-210ENST00000560498 ANKRD30BQ9BXX2 1392 aa24.65■■□□□ 1.54
HMG20A-210ENST00000560498 PRAG1Q86YV5 1406 aa24.63■■□□□ 1.53
HMG20A-210ENST00000560498 STK26Q9P289 416 aa24.62■■□□□ 1.53
HMG20A-210ENST00000560498 TMEM132EQ6IEE7 984 aa24.61■■□□□ 1.53
HMG20A-210ENST00000560498 SHPRHQ149N8 1683 aa24.6■■□□□ 1.53
HMG20A-210ENST00000560498 C1orf167Q5SNV9 1468 aa24.6■■□□□ 1.53
HMG20A-210ENST00000560498 ORAI2Q96SN7 254 aa24.59■■□□□ 1.53
HMG20A-210ENST00000560498 IFT172Q9UG01 1749 aa24.58■■□□□ 1.53
HMG20A-210ENST00000560498 WAPLQ7Z5K2 1190 aa24.58■■□□□ 1.53
HMG20A-210ENST00000560498 CDK12Q9NYV4 1490 aaPredicted RBP24.58■■□□□ 1.52
HMG20A-210ENST00000560498 NUTM2BA6NNL0 878 aaPredicted RBP24.57■■□□□ 1.52
HMG20A-210ENST00000560498 NUTM2EB1AL46 878 aaPredicted RBP24.57■■□□□ 1.52
HMG20A-210ENST00000560498 NUTM2AQ8IVF1 878 aaPredicted RBP24.57■■□□□ 1.52
HMG20A-210ENST00000560498 PIK3C2GO75747 1445 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms