RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 MED14O60244 1454 aa22.83■■□□□ 1.25
LYSMD2-204ENST00000560491 NPHP4O75161 1426 aaPredicted RBP22.82■■□□□ 1.24
LYSMD2-204ENST00000560491 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
LYSMD2-204ENST00000560491 DMRT2Q9Y5R5 561 aa22.81■■□□□ 1.24
LYSMD2-204ENST00000560491 EID1Q9Y6B2 187 aa22.81■■□□□ 1.24
LYSMD2-204ENST00000560491 NEXMIFQ5QGS0 1516 aa22.79■■□□□ 1.24
LYSMD2-204ENST00000560491 ZNF326Q5BKZ1 582 aaKnown RBP22.79■■□□□ 1.24
LYSMD2-204ENST00000560491 NUTM2DQ5VT03 806 aaPredicted RBP22.79■■□□□ 1.24
LYSMD2-204ENST00000560491 SPATA31E1Q6ZUB1 1445 aa22.77■■□□□ 1.24
LYSMD2-204ENST00000560491 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
LYSMD2-204ENST00000560491 PPLO60437 1756 aa22.76■■□□□ 1.23
LYSMD2-204ENST00000560491 PPP1R15AO75807 674 aaPredicted RBP22.74■■□□□ 1.23
LYSMD2-204ENST00000560491 IFT172Q9UG01 1749 aa22.74■■□□□ 1.23
LYSMD2-204ENST00000560491 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.72■■□□□ 1.23
LYSMD2-204ENST00000560491 HDGFP51858 240 aaKnown RBP22.71■■□□□ 1.23
LYSMD2-204ENST00000560491 RGL3Q3MIN7 710 aa22.71■■□□□ 1.23
LYSMD2-204ENST00000560491 PLEKHG1Q9ULL1 1385 aa22.71■■□□□ 1.23
LYSMD2-204ENST00000560491 NRXN3Q9Y4C0 1643 aa22.69■■□□□ 1.22
LYSMD2-204ENST00000560491 BCANQ96GW7 911 aa22.69■■□□□ 1.22
LYSMD2-204ENST00000560491 ZNF335Q9H4Z2 1342 aaPredicted RBP22.68■■□□□ 1.22
LYSMD2-204ENST00000560491 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
LYSMD2-204ENST00000560491 SLC26A8Q96RN1 970 aa22.66■■□□□ 1.22
LYSMD2-204ENST00000560491 LTBP4Q8N2S1 1624 aa22.66■■□□□ 1.22
LYSMD2-204ENST00000560491 SETBP1Q9Y6X0 1596 aa22.66■■□□□ 1.22
LYSMD2-204ENST00000560491 STRCP1A6NGW2 1772 aa22.66■■□□□ 1.22
LYSMD2-204ENST00000560491 ADAMTS13Q76LX8 1427 aa22.65■■□□□ 1.22
LYSMD2-204ENST00000560491 DIP2AQ14689 1571 aa22.63■■□□□ 1.21
LYSMD2-204ENST00000560491 SIN3AQ96ST3 1273 aa22.61■■□□□ 1.21
LYSMD2-204ENST00000560491 VGFO15240 615 aaPredicted RBP22.6■■□□□ 1.21
LYSMD2-204ENST00000560491 SETD1AO15047 1707 aaKnown RBP22.6■■□□□ 1.21
LYSMD2-204ENST00000560491 ADGRF5Q8IZF2 1346 aa22.59■■□□□ 1.21
LYSMD2-204ENST00000560491 CHD2O14647 1828 aaKnown RBP22.58■■□□□ 1.21
LYSMD2-204ENST00000560491 MYOM2P54296 1465 aa22.58■■□□□ 1.2
LYSMD2-204ENST00000560491 NWD1Q149M9 1564 aa22.56■■□□□ 1.2
LYSMD2-204ENST00000560491 TBX22Q9Y458 520 aa22.56■■□□□ 1.2
LYSMD2-204ENST00000560491 ALKQ9UM73 1620 aa22.56■■□□□ 1.2
LYSMD2-204ENST00000560491 NEUROD1Q13562 356 aa22.55■■□□□ 1.2
LYSMD2-204ENST00000560491 CPS1P31327 1500 aa22.55■■□□□ 1.2
LYSMD2-204ENST00000560491 PIK3C2GO75747 1445 aa22.54■■□□□ 1.2
LYSMD2-204ENST00000560491 NRXN1Q9ULB1 1477 aa22.54■■□□□ 1.2
LYSMD2-204ENST00000560491 DCAF11Q8TEB1 546 aa22.53■■□□□ 1.2
LYSMD2-204ENST00000560491 KDM2AQ9Y2K7 1162 aa22.52■■□□□ 1.2
LYSMD2-204ENST00000560491 METP08581 1390 aa22.51■■□□□ 1.19
LYSMD2-204ENST00000560491 CERKQ8TCT0 537 aa22.51■■□□□ 1.19
LYSMD2-204ENST00000560491 PTPRUQ92729 1446 aa22.5■■□□□ 1.19
LYSMD2-204ENST00000560491 KCNA6P17658 529 aa22.5■■□□□ 1.19
LYSMD2-204ENST00000560491 XRN1Q8IZH2 1706 aaKnown RBP22.49■■□□□ 1.19
LYSMD2-204ENST00000560491 LRRC7Q96NW7 1537 aa22.49■■□□□ 1.19
LYSMD2-204ENST00000560491 XIRP1Q702N8 1843 aaKnown RBP22.49■■□□□ 1.19
LYSMD2-204ENST00000560491 PIK3R4Q99570 1358 aa22.49■■□□□ 1.19
LYSMD2-204ENST00000560491 LAMC1P11047 1609 aa22.48■■□□□ 1.19
LYSMD2-204ENST00000560491 NKTRP30414 1462 aaKnown RBP22.47■■□□□ 1.19
LYSMD2-204ENST00000560491 ASXL1Q8IXJ9 1541 aa22.47■■□□□ 1.19
LYSMD2-204ENST00000560491 L3MBTL2Q969R5 705 aa22.45■■□□□ 1.18
LYSMD2-204ENST00000560491 CFAP70Q5T0N1 1121 aa22.43■■□□□ 1.18
LYSMD2-204ENST00000560491 AMOTL2Q9Y2J4 779 aa22.43■■□□□ 1.18
LYSMD2-204ENST00000560491 IQSEC2Q5JU85 1478 aa22.42■■□□□ 1.18
LYSMD2-204ENST00000560491 RBM33Q96EV2 1170 aaKnown RBP22.42■■□□□ 1.18
LYSMD2-204ENST00000560491 CCER1Q8TC90 406 aaPredicted RBP22.41■■□□□ 1.18
LYSMD2-204ENST00000560491 STAC3Q96MF2 364 aa22.41■■□□□ 1.18
LYSMD2-204ENST00000560491 C14orf93Q9H972 538 aaKnown RBP22.41■■□□□ 1.18
LYSMD2-204ENST00000560491 TMEM94Q12767 1356 aa22.4■■□□□ 1.18
LYSMD2-204ENST00000560491 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
LYSMD2-204ENST00000560491 PROSER2Q86WR7 435 aaPredicted RBP22.4■■□□□ 1.18
LYSMD2-204ENST00000560491 PRAG1Q86YV5 1406 aa22.4■■□□□ 1.18
LYSMD2-204ENST00000560491 TONSLQ96HA7 1378 aa22.39■■□□□ 1.18
LYSMD2-204ENST00000560491 KNDC1Q76NI1 1749 aa22.38■■□□□ 1.17
LYSMD2-204ENST00000560491 ADGRB1O14514 1584 aa22.38■■□□□ 1.17
LYSMD2-204ENST00000560491 CLSPNQ9HAW4 1339 aa22.37■■□□□ 1.17
LYSMD2-204ENST00000560491 KIAA1210Q9ULL0 1709 aa22.37■■□□□ 1.17
LYSMD2-204ENST00000560491 PTCH1Q13635 1447 aa22.35■■□□□ 1.17
LYSMD2-204ENST00000560491 YTHDC2Q9H6S0 1430 aaKnown RBP22.35■■□□□ 1.17
LYSMD2-204ENST00000560491 STK26Q9P289 416 aa22.35■■□□□ 1.17
LYSMD2-204ENST00000560491 ROBO2Q9HCK4 1378 aa22.35■■□□□ 1.17
LYSMD2-204ENST00000560491 LRPPRCP42704 1394 aaKnown RBP22.34■■□□□ 1.17
LYSMD2-204ENST00000560491 TRPM1Q7Z4N2 1603 aa22.33■■□□□ 1.17
LYSMD2-204ENST00000560491 TECPR2O15040 1411 aa22.32■■□□□ 1.16
LYSMD2-204ENST00000560491 NALCNQ8IZF0 1738 aa22.31■■□□□ 1.16
LYSMD2-204ENST00000560491 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.29■■□□□ 1.16
LYSMD2-204ENST00000560491 ABCC11Q96J66 1382 aa22.29■■□□□ 1.16
LYSMD2-204ENST00000560491 UBAP1LF5GYI3 381 aa22.28■■□□□ 1.16
LYSMD2-204ENST00000560491 NBPF8Q3BBV2 869 aa22.28■■□□□ 1.16
LYSMD2-204ENST00000560491 C14orf37Q86TY3 774 aa22.28■■□□□ 1.16
LYSMD2-204ENST00000560491 NCOA3Q9Y6Q9 1424 aa22.28■■□□□ 1.16
LYSMD2-204ENST00000560491 MSH6P52701 1360 aa22.27■■□□□ 1.16
LYSMD2-204ENST00000560491 NBPF1Q3BBV0 1214 aa22.27■■□□□ 1.16
LYSMD2-204ENST00000560491 PLEKHH1Q9ULM0 1364 aa22.26■■□□□ 1.15
LYSMD2-204ENST00000560491 ARHGEF28Q8N1W1 1705 aaKnown RBP22.26■■□□□ 1.15
LYSMD2-204ENST00000560491 FBXO41Q8TF61 875 aa22.26■■□□□ 1.15
LYSMD2-204ENST00000560491 WAPLQ7Z5K2 1190 aa22.25■■□□□ 1.15
LYSMD2-204ENST00000560491 DLC1Q96QB1 1528 aa22.25■■□□□ 1.15
LYSMD2-204ENST00000560491 ADGRL3Q9HAR2 1447 aa22.24■■□□□ 1.15
LYSMD2-204ENST00000560491 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
LYSMD2-204ENST00000560491 FAM135BQ49AJ0 1406 aa22.23■■□□□ 1.15
LYSMD2-204ENST00000560491 TOM1O60784 492 aa22.21■■□□□ 1.15
LYSMD2-204ENST00000560491 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
LYSMD2-204ENST00000560491 PRAM1Q96QH2 718 aa22.2■■□□□ 1.14
LYSMD2-204ENST00000560491 ROCK2O75116 1388 aaKnown RBP22.2■■□□□ 1.14
LYSMD2-204ENST00000560491 RALGAPBQ86X10 1494 aa22.2■■□□□ 1.14
LYSMD2-204ENST00000560491 PIP4K2BP78356 416 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms