RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
PKNOX1-209ENST00000560448 RIMS2Q9UQ26 1411 aa20.53■□□□□ 0.88
PKNOX1-209ENST00000560448 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
PKNOX1-209ENST00000560448 FOXD1Q16676 465 aa20.53■□□□□ 0.88
PKNOX1-209ENST00000560448 LTKP29376 864 aa20.52■□□□□ 0.87
PKNOX1-209ENST00000560448 ANKRD30BQ9BXX2 1392 aa20.51■□□□□ 0.87
PKNOX1-209ENST00000560448 PLEKHG1Q9ULL1 1385 aa20.5■□□□□ 0.87
PKNOX1-209ENST00000560448 PPP1R15AO75807 674 aaPredicted RBP20.49■□□□□ 0.87
PKNOX1-209ENST00000560448 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
PKNOX1-209ENST00000560448 ILDR1Q86SU0 546 aaPredicted RBP20.46■□□□□ 0.87
PKNOX1-209ENST00000560448 SPATA31E1Q6ZUB1 1445 aa20.46■□□□□ 0.87
PKNOX1-209ENST00000560448 NEXMIFQ5QGS0 1516 aa20.46■□□□□ 0.87
PKNOX1-209ENST00000560448 DIP2AQ14689 1571 aa20.45■□□□□ 0.86
PKNOX1-209ENST00000560448 VGFO15240 615 aaPredicted RBP20.44■□□□□ 0.86
PKNOX1-209ENST00000560448 CPS1P31327 1500 aa20.42■□□□□ 0.86
PKNOX1-209ENST00000560448 STAC3Q96MF2 364 aa20.42■□□□□ 0.86
PKNOX1-209ENST00000560448 SETBP1Q9Y6X0 1596 aa20.41■□□□□ 0.86
PKNOX1-209ENST00000560448 PPLO60437 1756 aa20.41■□□□□ 0.86
PKNOX1-209ENST00000560448 IQSEC2Q5JU85 1478 aa20.4■□□□□ 0.86
PKNOX1-209ENST00000560448 PIK3R4Q99570 1358 aa20.4■□□□□ 0.86
PKNOX1-209ENST00000560448 TBX22Q9Y458 520 aa20.4■□□□□ 0.86
PKNOX1-209ENST00000560448 LTBP4Q8N2S1 1624 aa20.39■□□□□ 0.86
PKNOX1-209ENST00000560448 DHX57Q6P158 1386 aaKnown RBP20.38■□□□□ 0.85
PKNOX1-209ENST00000560448 BCANQ96GW7 911 aa20.38■□□□□ 0.85
PKNOX1-209ENST00000560448 ZNF335Q9H4Z2 1342 aaPredicted RBP20.37■□□□□ 0.85
PKNOX1-209ENST00000560448 IFT172Q9UG01 1749 aa20.37■□□□□ 0.85
PKNOX1-209ENST00000560448 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
PKNOX1-209ENST00000560448 MYOM2P54296 1465 aa20.36■□□□□ 0.85
PKNOX1-209ENST00000560448 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
PKNOX1-209ENST00000560448 SLC26A8Q96RN1 970 aa20.34■□□□□ 0.85
PKNOX1-209ENST00000560448 NWD1Q149M9 1564 aa20.33■□□□□ 0.85
PKNOX1-209ENST00000560448 NRXN3Q9Y4C0 1643 aa20.33■□□□□ 0.85
PKNOX1-209ENST00000560448 KCNA6P17658 529 aa20.33■□□□□ 0.84
PKNOX1-209ENST00000560448 CERKQ8TCT0 537 aa20.33■□□□□ 0.84
PKNOX1-209ENST00000560448 NKTRP30414 1462 aaKnown RBP20.33■□□□□ 0.84
PKNOX1-209ENST00000560448 NUTM2DQ5VT03 806 aaPredicted RBP20.32■□□□□ 0.84
PKNOX1-209ENST00000560448 FBXO41Q8TF61 875 aa20.31■□□□□ 0.84
PKNOX1-209ENST00000560448 NRXN1Q9ULB1 1477 aa20.3■□□□□ 0.84
PKNOX1-209ENST00000560448 CHD2O14647 1828 aaKnown RBP20.29■□□□□ 0.84
PKNOX1-209ENST00000560448 PIK3C2GO75747 1445 aa20.29■□□□□ 0.84
PKNOX1-209ENST00000560448 LAMC1P11047 1609 aa20.27■□□□□ 0.84
PKNOX1-209ENST00000560448 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.84
PKNOX1-209ENST00000560448 ALKQ9UM73 1620 aa20.26■□□□□ 0.83
PKNOX1-209ENST00000560448 STRCP1A6NGW2 1772 aa20.26■□□□□ 0.83
PKNOX1-209ENST00000560448 NCOA3Q9Y6Q9 1424 aa20.25■□□□□ 0.83
PKNOX1-209ENST00000560448 ADGRF5Q8IZF2 1346 aa20.25■□□□□ 0.83
PKNOX1-209ENST00000560448 PRAG1Q86YV5 1406 aa20.25■□□□□ 0.83
PKNOX1-209ENST00000560448 SETD1AO15047 1707 aaKnown RBP20.24■□□□□ 0.83
PKNOX1-209ENST00000560448 LRRC7Q96NW7 1537 aa20.24■□□□□ 0.83
PKNOX1-209ENST00000560448 DCAF11Q8TEB1 546 aa20.23■□□□□ 0.83
PKNOX1-209ENST00000560448 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
PKNOX1-209ENST00000560448 METP08581 1390 aa20.21■□□□□ 0.83
PKNOX1-209ENST00000560448 C14orf93Q9H972 538 aaKnown RBP20.19■□□□□ 0.82
PKNOX1-209ENST00000560448 AMOTL2Q9Y2J4 779 aa20.19■□□□□ 0.82
PKNOX1-209ENST00000560448 PTCH1Q13635 1447 aa20.19■□□□□ 0.82
PKNOX1-209ENST00000560448 PTPRUQ92729 1446 aa20.17■□□□□ 0.82
PKNOX1-209ENST00000560448 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
PKNOX1-209ENST00000560448 TMEM94Q12767 1356 aa20.16■□□□□ 0.82
PKNOX1-209ENST00000560448 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
PKNOX1-209ENST00000560448 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
PKNOX1-209ENST00000560448 TECPR2O15040 1411 aa20.16■□□□□ 0.82
PKNOX1-209ENST00000560448 KIAA1210Q9ULL0 1709 aa20.14■□□□□ 0.82
PKNOX1-209ENST00000560448 TOM1O60784 492 aa20.14■□□□□ 0.81
PKNOX1-209ENST00000560448 KDM2AQ9Y2K7 1162 aa20.14■□□□□ 0.81
PKNOX1-209ENST00000560448 LRPPRCP42704 1394 aaKnown RBP20.14■□□□□ 0.81
PKNOX1-209ENST00000560448 ABCC11Q96J66 1382 aa20.14■□□□□ 0.81
PKNOX1-209ENST00000560448 NEUROD1Q13562 356 aa20.13■□□□□ 0.81
PKNOX1-209ENST00000560448 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
PKNOX1-209ENST00000560448 XIRP1Q702N8 1843 aaKnown RBP20.13■□□□□ 0.81
PKNOX1-209ENST00000560448 TONSLQ96HA7 1378 aa20.13■□□□□ 0.81
PKNOX1-209ENST00000560448 L3MBTL2Q969R5 705 aa20.12■□□□□ 0.81
PKNOX1-209ENST00000560448 TIMELESSQ9UNS1 1208 aa20.12■□□□□ 0.81
PKNOX1-209ENST00000560448 MSH6P52701 1360 aa20.12■□□□□ 0.81
PKNOX1-209ENST00000560448 SIRT1Q96EB6 747 aa20.11■□□□□ 0.81
PKNOX1-209ENST00000560448 DCCP43146 1447 aa20.11■□□□□ 0.81
PKNOX1-209ENST00000560448 ASXL1Q8IXJ9 1541 aa20.11■□□□□ 0.81
PKNOX1-209ENST00000560448 CFAP70Q5T0N1 1121 aa20.1■□□□□ 0.81
PKNOX1-209ENST00000560448 YTHDC2Q9H6S0 1430 aaKnown RBP20.1■□□□□ 0.81
PKNOX1-209ENST00000560448 FAM135BQ49AJ0 1406 aa20.09■□□□□ 0.81
PKNOX1-209ENST00000560448 ADGRB1O14514 1584 aa20.09■□□□□ 0.81
PKNOX1-209ENST00000560448 C19orf44Q9H6X5 657 aa20.09■□□□□ 0.81
PKNOX1-209ENST00000560448 DLC1Q96QB1 1528 aa20.08■□□□□ 0.8
PKNOX1-209ENST00000560448 UBAP1LF5GYI3 381 aa20.07■□□□□ 0.8
PKNOX1-209ENST00000560448 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
PKNOX1-209ENST00000560448 ADGRL3Q9HAR2 1447 aa20.05■□□□□ 0.8
PKNOX1-209ENST00000560448 ROBO2Q9HCK4 1378 aa20.05■□□□□ 0.8
PKNOX1-209ENST00000560448 C14orf37Q86TY3 774 aa20.05■□□□□ 0.8
PKNOX1-209ENST00000560448 TMEM132EQ6IEE7 984 aa20.04■□□□□ 0.8
PKNOX1-209ENST00000560448 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
PKNOX1-209ENST00000560448 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.02■□□□□ 0.8
PKNOX1-209ENST00000560448 ATF3P18847 181 aa20.02■□□□□ 0.79
PKNOX1-209ENST00000560448 STK26Q9P289 416 aa20.01■□□□□ 0.79
PKNOX1-209ENST00000560448 TRPM1Q7Z4N2 1603 aa20■□□□□ 0.79
PKNOX1-209ENST00000560448 RBM33Q96EV2 1170 aaKnown RBP19.99■□□□□ 0.79
PKNOX1-209ENST00000560448 NALCNQ8IZF0 1738 aa19.99■□□□□ 0.79
PKNOX1-209ENST00000560448 CDC42BPGQ6DT37 1551 aa19.98■□□□□ 0.79
PKNOX1-209ENST00000560448 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
PKNOX1-209ENST00000560448 GPRASP1Q5JY77 1395 aa19.96■□□□□ 0.79
PKNOX1-209ENST00000560448 SLAIN2Q9P270 581 aa19.96■□□□□ 0.79
PKNOX1-209ENST00000560448 ROCK2O75116 1388 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms