RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 RPRD2Q5VT52 1461 aaKnown RBP22.3■■□□□ 1.16
IDH3A-219ENST00000560414 ARHGAP23Q9P227 1491 aa22.29■■□□□ 1.16
IDH3A-219ENST00000560414 SCAF11Q99590 1463 aaKnown RBP22.28■■□□□ 1.16
IDH3A-219ENST00000560414 SLIT1O75093 1534 aa22.28■■□□□ 1.16
IDH3A-219ENST00000560414 SPINK5Q9NQ38 1064 aaPredicted RBP22.28■■□□□ 1.16
IDH3A-219ENST00000560414 SLC52A1Q9NWF4 448 aa22.28■■□□□ 1.16
IDH3A-219ENST00000560414 TMEM2Q9UHN6 1383 aa22.27■■□□□ 1.16
IDH3A-219ENST00000560414 IQGAP1P46940 1657 aa22.27■■□□□ 1.16
IDH3A-219ENST00000560414 IQSEC2Q5JU85 1478 aa22.27■■□□□ 1.16
IDH3A-219ENST00000560414 EID1Q9Y6B2 187 aa22.26■■□□□ 1.15
IDH3A-219ENST00000560414 IQGAP3Q86VI3 1631 aa22.26■■□□□ 1.15
IDH3A-219ENST00000560414 GCC2Q8IWJ2 1684 aa22.26■■□□□ 1.15
IDH3A-219ENST00000560414 E9PCH4 1651 aa22.23■■□□□ 1.15
IDH3A-219ENST00000560414 NAIPQ13075 1403 aa22.23■■□□□ 1.15
IDH3A-219ENST00000560414 ADGRB3O60242 1522 aa22.22■■□□□ 1.15
IDH3A-219ENST00000560414 CAPN15O75808 1086 aa22.21■■□□□ 1.15
IDH3A-219ENST00000560414 KDM5AP29375 1690 aaKnown RBP22.2■■□□□ 1.15
IDH3A-219ENST00000560414 UBAP1LF5GYI3 381 aa22.2■■□□□ 1.14
IDH3A-219ENST00000560414 ZNF219Q9P2Y4 722 aaPredicted RBP22.2■■□□□ 1.14
IDH3A-219ENST00000560414 CPS1P31327 1500 aa22.2■■□□□ 1.14
IDH3A-219ENST00000560414 CHGAP10645 457 aaKnown RBP22.19■■□□□ 1.14
IDH3A-219ENST00000560414 HFM1A2PYH4 1435 aa22.15■■□□□ 1.14
IDH3A-219ENST00000560414 STRCP1A6NGW2 1772 aa22.15■■□□□ 1.14
IDH3A-219ENST00000560414 TRIM52Q96A61 297 aa22.14■■□□□ 1.13
IDH3A-219ENST00000560414 SLC26A8Q96RN1 970 aa22.14■■□□□ 1.13
IDH3A-219ENST00000560414 MYO5BQ9ULV0 1848 aa22.14■■□□□ 1.13
IDH3A-219ENST00000560414 TMEM131LA2VDJ0 1609 aa22.13■■□□□ 1.13
IDH3A-219ENST00000560414 BCANQ96GW7 911 aa22.12■■□□□ 1.13
IDH3A-219ENST00000560414 ZFYVE9O95405 1425 aa22.12■■□□□ 1.13
IDH3A-219ENST00000560414 RIMS2Q9UQ26 1411 aa22.12■■□□□ 1.13
IDH3A-219ENST00000560414 NUTM2DQ5VT03 806 aaPredicted RBP22.11■■□□□ 1.13
IDH3A-219ENST00000560414 LRRC7Q96NW7 1537 aa22.1■■□□□ 1.13
IDH3A-219ENST00000560414 PPP1R15AO75807 674 aaPredicted RBP22.09■■□□□ 1.13
IDH3A-219ENST00000560414 HDGFP51858 240 aaKnown RBP22.08■■□□□ 1.13
IDH3A-219ENST00000560414 TOM1O60784 492 aa22.07■■□□□ 1.12
IDH3A-219ENST00000560414 PIP4K2BP78356 416 aa22.07■■□□□ 1.12
IDH3A-219ENST00000560414 SPHKAPQ2M3C7 1700 aa22.06■■□□□ 1.12
IDH3A-219ENST00000560414 PLEKHG1Q9ULL1 1385 aa22.05■■□□□ 1.12
IDH3A-219ENST00000560414 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.05■■□□□ 1.12
IDH3A-219ENST00000560414 KCNA6P17658 529 aa22.04■■□□□ 1.12
IDH3A-219ENST00000560414 RBM33Q96EV2 1170 aaKnown RBP22.01■■□□□ 1.11
IDH3A-219ENST00000560414 ALKQ9UM73 1620 aa22■■□□□ 1.11
IDH3A-219ENST00000560414 ZNF326Q5BKZ1 582 aaKnown RBP22■■□□□ 1.11
IDH3A-219ENST00000560414 CLTCL1P53675 1640 aa21.98■■□□□ 1.11
IDH3A-219ENST00000560414 TRPM2O94759 1503 aa21.98■■□□□ 1.11
IDH3A-219ENST00000560414 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
IDH3A-219ENST00000560414 TBX22Q9Y458 520 aa21.98■■□□□ 1.11
IDH3A-219ENST00000560414 TMEM94Q12767 1356 aa21.98■■□□□ 1.11
IDH3A-219ENST00000560414 ADAMTS13Q76LX8 1427 aa21.97■■□□□ 1.11
IDH3A-219ENST00000560414 HSPA1LP34931 641 aa21.96■■□□□ 1.11
IDH3A-219ENST00000560414 XIRP1Q702N8 1843 aaKnown RBP21.95■■□□□ 1.1
IDH3A-219ENST00000560414 NWD1Q149M9 1564 aa21.93■■□□□ 1.1
IDH3A-219ENST00000560414 MPHOSPH9Q99550 1183 aa21.93■■□□□ 1.1
IDH3A-219ENST00000560414 SETD5Q9C0A6 1442 aa21.91■■□□□ 1.1
IDH3A-219ENST00000560414 NKTRP30414 1462 aaKnown RBP21.9■■□□□ 1.1
IDH3A-219ENST00000560414 CHD2O14647 1828 aaKnown RBP21.9■■□□□ 1.1
IDH3A-219ENST00000560414 CACNB1Q02641 598 aaPredicted RBP21.9■■□□□ 1.1
IDH3A-219ENST00000560414 POLA2Q14181 598 aa21.9■■□□□ 1.1
IDH3A-219ENST00000560414 KIF1BO60333 1816 aa21.88■■□□□ 1.09
IDH3A-219ENST00000560414 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
IDH3A-219ENST00000560414 NEXMIFQ5QGS0 1516 aa21.87■■□□□ 1.09
IDH3A-219ENST00000560414 PIK3R4Q99570 1358 aa21.86■■□□□ 1.09
IDH3A-219ENST00000560414 DISP3Q9P2K9 1392 aa21.86■■□□□ 1.09
IDH3A-219ENST00000560414 AMOTL2Q9Y2J4 779 aa21.85■■□□□ 1.09
IDH3A-219ENST00000560414 PTPRUQ92729 1446 aa21.85■■□□□ 1.09
IDH3A-219ENST00000560414 RAB3GAP2Q9H2M9 1393 aa21.85■■□□□ 1.09
IDH3A-219ENST00000560414 NRXN3Q9Y4C0 1643 aa21.84■■□□□ 1.09
IDH3A-219ENST00000560414 SETBP1Q9Y6X0 1596 aa21.84■■□□□ 1.09
IDH3A-219ENST00000560414 MSH6P52701 1360 aa21.83■■□□□ 1.08
IDH3A-219ENST00000560414 METP08581 1390 aa21.82■■□□□ 1.08
IDH3A-219ENST00000560414 VGFO15240 615 aaPredicted RBP21.81■■□□□ 1.08
IDH3A-219ENST00000560414 C14orf37Q86TY3 774 aa21.81■■□□□ 1.08
IDH3A-219ENST00000560414 CCDC144AA2RUR9 1427 aa21.8■■□□□ 1.08
IDH3A-219ENST00000560414 ABCB7O75027 752 aa21.8■■□□□ 1.08
IDH3A-219ENST00000560414 RPGRIP1LQ68CZ1 1315 aa21.8■■□□□ 1.08
IDH3A-219ENST00000560414 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
IDH3A-219ENST00000560414 RGL3Q3MIN7 710 aa21.79■■□□□ 1.08
IDH3A-219ENST00000560414 FAM135BQ49AJ0 1406 aa21.78■■□□□ 1.08
IDH3A-219ENST00000560414 SLAIN2Q9P270 581 aa21.76■■□□□ 1.07
IDH3A-219ENST00000560414 NCOA3Q9Y6Q9 1424 aa21.76■■□□□ 1.07
IDH3A-219ENST00000560414 SPATA31E1Q6ZUB1 1445 aa21.74■■□□□ 1.07
IDH3A-219ENST00000560414 C19orf44Q9H6X5 657 aa21.74■■□□□ 1.07
IDH3A-219ENST00000560414 XRN1Q8IZH2 1706 aaKnown RBP21.73■■□□□ 1.07
IDH3A-219ENST00000560414 PPLO60437 1756 aa21.73■■□□□ 1.07
IDH3A-219ENST00000560414 ADGRF5Q8IZF2 1346 aa21.73■■□□□ 1.07
IDH3A-219ENST00000560414 DSG3P32926 999 aa21.72■■□□□ 1.07
IDH3A-219ENST00000560414 ILDR2Q71H61 639 aa21.72■■□□□ 1.07
IDH3A-219ENST00000560414 ROBO1Q9Y6N7 1651 aa21.72■■□□□ 1.07
IDH3A-219ENST00000560414 ATF3P18847 181 aa21.71■■□□□ 1.07
IDH3A-219ENST00000560414 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.69■■□□□ 1.06
IDH3A-219ENST00000560414 CADPS2Q86UW7 1296 aa21.69■■□□□ 1.06
IDH3A-219ENST00000560414 SETD1AO15047 1707 aaKnown RBP21.67■■□□□ 1.06
IDH3A-219ENST00000560414 MED1Q15648 1581 aaPredicted RBP21.67■■□□□ 1.06
IDH3A-219ENST00000560414 HRCP23327 699 aa21.67■■□□□ 1.06
IDH3A-219ENST00000560414 ANKRD30BQ9BXX2 1392 aa21.66■■□□□ 1.06
IDH3A-219ENST00000560414 ROBO2Q9HCK4 1378 aa21.64■■□□□ 1.06
IDH3A-219ENST00000560414 FKBP8Q14318 412 aa21.64■■□□□ 1.05
IDH3A-219ENST00000560414 IFT172Q9UG01 1749 aa21.62■■□□□ 1.05
IDH3A-219ENST00000560414 ADGRL3Q9HAR2 1447 aa21.61■■□□□ 1.05
IDH3A-219ENST00000560414 TMEM132EQ6IEE7 984 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms