RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 LRP6O75581 1613 aa20.34■□□□□ 0.85
RABGGTA-213ENST00000560127 UPF1Q92900 1129 aaKnown RBP eCLIP20.33■□□□□ 0.85
RABGGTA-213ENST00000560127 PTPN23Q9H3S7 1636 aa20.32■□□□□ 0.84
RABGGTA-213ENST00000560127 SRCAPQ6ZRS2 3230 aa20.31■□□□□ 0.84
RABGGTA-213ENST00000560127 SHPRHQ149N8 1683 aa20.29■□□□□ 0.84
RABGGTA-213ENST00000560127 BCANQ96GW7 911 aa20.29■□□□□ 0.84
RABGGTA-213ENST00000560127 DAPK1P53355 1430 aa20.28■□□□□ 0.84
RABGGTA-213ENST00000560127 SPATA31A6Q5VVP1 1343 aa20.27■□□□□ 0.84
RABGGTA-213ENST00000560127 ZFYVE9O95405 1425 aa20.27■□□□□ 0.84
RABGGTA-213ENST00000560127 FGD6Q6ZV73 1430 aa20.27■□□□□ 0.84
RABGGTA-213ENST00000560127 GCC2Q8IWJ2 1684 aa20.27■□□□□ 0.84
RABGGTA-213ENST00000560127 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
RABGGTA-213ENST00000560127 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.27■□□□□ 0.83
RABGGTA-213ENST00000560127 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
RABGGTA-213ENST00000560127 ZNF772Q68DY9 489 aaPredicted RBP20.26■□□□□ 0.83
RABGGTA-213ENST00000560127 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
RABGGTA-213ENST00000560127 AHDC1Q5TGY3 1603 aaPredicted RBP20.26■□□□□ 0.83
RABGGTA-213ENST00000560127 MEX3CQ5U5Q3 659 aaKnown RBP20.24■□□□□ 0.83
RABGGTA-213ENST00000560127 NCOA3Q9Y6Q9 1424 aa20.23■□□□□ 0.83
RABGGTA-213ENST00000560127 TMEM131LA2VDJ0 1609 aa20.23■□□□□ 0.83
RABGGTA-213ENST00000560127 RIMS2Q9UQ26 1411 aa20.22■□□□□ 0.83
RABGGTA-213ENST00000560127 ANKRD30AQ9BXX3 1397 aa20.21■□□□□ 0.83
RABGGTA-213ENST00000560127 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
RABGGTA-213ENST00000560127 DIP2AQ14689 1571 aa20.2■□□□□ 0.82
RABGGTA-213ENST00000560127 RPRD2Q5VT52 1461 aaKnown RBP20.19■□□□□ 0.82
RABGGTA-213ENST00000560127 TBX22Q9Y458 520 aa20.19■□□□□ 0.82
RABGGTA-213ENST00000560127 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
RABGGTA-213ENST00000560127 RXRBP28702 533 aa20.18■□□□□ 0.82
RABGGTA-213ENST00000560127 C14orf37Q86TY3 774 aa20.17■□□□□ 0.82
RABGGTA-213ENST00000560127 CADPS2Q86UW7 1296 aa20.17■□□□□ 0.82
RABGGTA-213ENST00000560127 ADAMTS13Q76LX8 1427 aa20.17■□□□□ 0.82
RABGGTA-213ENST00000560127 CDK12Q9NYV4 1490 aaPredicted RBP20.17■□□□□ 0.82
RABGGTA-213ENST00000560127 C19orf44Q9H6X5 657 aa20.16■□□□□ 0.82
RABGGTA-213ENST00000560127 HDGFP51858 240 aaKnown RBP20.15■□□□□ 0.82
RABGGTA-213ENST00000560127 ATF3P18847 181 aa20.14■□□□□ 0.81
RABGGTA-213ENST00000560127 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
RABGGTA-213ENST00000560127 NUTM2BA6NNL0 878 aaPredicted RBP20.12■□□□□ 0.81
RABGGTA-213ENST00000560127 NUTM2EB1AL46 878 aaPredicted RBP20.12■□□□□ 0.81
RABGGTA-213ENST00000560127 BRINP3Q76B58 766 aa20.12■□□□□ 0.81
RABGGTA-213ENST00000560127 NUTM2AQ8IVF1 878 aaPredicted RBP20.12■□□□□ 0.81
RABGGTA-213ENST00000560127 PIK3R4Q99570 1358 aa20.11■□□□□ 0.81
RABGGTA-213ENST00000560127 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
RABGGTA-213ENST00000560127 NUTM2DQ5VT03 806 aaPredicted RBP20.11■□□□□ 0.81
RABGGTA-213ENST00000560127 NHSL1Q5SYE7 1610 aa20.1■□□□□ 0.81
RABGGTA-213ENST00000560127 AFF2P51816 1311 aa20.1■□□□□ 0.81
RABGGTA-213ENST00000560127 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.1■□□□□ 0.81
RABGGTA-213ENST00000560127 E9PCH4 1651 aa20.09■□□□□ 0.81
RABGGTA-213ENST00000560127 ASXL1Q8IXJ9 1541 aa20.08■□□□□ 0.81
RABGGTA-213ENST00000560127 PTPRUQ92729 1446 aa20.08■□□□□ 0.8
RABGGTA-213ENST00000560127 ANKRD50Q9ULJ7 1429 aa20.08■□□□□ 0.8
RABGGTA-213ENST00000560127 TRPM2O94759 1503 aa20.07■□□□□ 0.8
RABGGTA-213ENST00000560127 CHGAP10645 457 aaKnown RBP20.07■□□□□ 0.8
RABGGTA-213ENST00000560127 RGS12O14924 1447 aa20.07■□□□□ 0.8
RABGGTA-213ENST00000560127 SETD5Q9C0A6 1442 aa20.07■□□□□ 0.8
RABGGTA-213ENST00000560127 UNC13BO14795 1591 aa20.06■□□□□ 0.8
RABGGTA-213ENST00000560127 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
RABGGTA-213ENST00000560127 DCCP43146 1447 aa20.05■□□□□ 0.8
RABGGTA-213ENST00000560127 AMOTL2Q9Y2J4 779 aa20.05■□□□□ 0.8
RABGGTA-213ENST00000560127 EP400Q96L91 3159 aa20.03■□□□□ 0.8
RABGGTA-213ENST00000560127 MST1RQ04912 1400 aa20.03■□□□□ 0.8
RABGGTA-213ENST00000560127 NRXN3Q9Y4C0 1643 aa20.03■□□□□ 0.8
RABGGTA-213ENST00000560127 RBM6P78332 1123 aaKnown RBP20.01■□□□□ 0.79
RABGGTA-213ENST00000560127 APLP2Q06481 763 aa20.01■□□□□ 0.79
RABGGTA-213ENST00000560127 C8orf37Q96NL8 207 aa20.01■□□□□ 0.79
RABGGTA-213ENST00000560127 QTRT2Q9H974 415 aaKnown RBP20.01■□□□□ 0.79
RABGGTA-213ENST00000560127 LRRC59Q96AG4 307 aaKnown RBP19.99■□□□□ 0.79
RABGGTA-213ENST00000560127 PNPLA6Q8IY17 1366 aa19.98■□□□□ 0.79
RABGGTA-213ENST00000560127 IQGAP3Q86VI3 1631 aa19.98■□□□□ 0.79
RABGGTA-213ENST00000560127 DDX17Q92841 729 aaKnown RBP19.97■□□□□ 0.79
RABGGTA-213ENST00000560127 SETBP1Q9Y6X0 1596 aa19.96■□□□□ 0.79
RABGGTA-213ENST00000560127 NALCNQ8IZF0 1738 aa19.96■□□□□ 0.79
RABGGTA-213ENST00000560127 FAM50AQ14320 339 aaKnown RBP19.95■□□□□ 0.78
RABGGTA-213ENST00000560127 LAMC1P11047 1609 aa19.92■□□□□ 0.78
RABGGTA-213ENST00000560127 METP08581 1390 aa19.92■□□□□ 0.78
RABGGTA-213ENST00000560127 ADGRL3Q9HAR2 1447 aa19.92■□□□□ 0.78
RABGGTA-213ENST00000560127 NGLY1Q96IV0 654 aa19.91■□□□□ 0.78
RABGGTA-213ENST00000560127 ATAD2Q6PL18 1390 aa19.91■□□□□ 0.78
RABGGTA-213ENST00000560127 ADAMTS2O95450 1211 aa19.9■□□□□ 0.78
RABGGTA-213ENST00000560127 SPHKAPQ2M3C7 1700 aa19.89■□□□□ 0.77
RABGGTA-213ENST00000560127 C1orf167Q5SNV9 1468 aa19.86■□□□□ 0.77
RABGGTA-213ENST00000560127 USP21Q9UK80 565 aa19.85■□□□□ 0.77
RABGGTA-213ENST00000560127 NUP155O75694 1391 aa19.84■□□□□ 0.77
RABGGTA-213ENST00000560127 ZRANB1Q9UGI0 708 aa19.84■□□□□ 0.77
RABGGTA-213ENST00000560127 TRPC5Q9UL62 973 aaPredicted RBP19.84■□□□□ 0.77
RABGGTA-213ENST00000560127 SOS2Q07890 1332 aaPredicted RBP19.83■□□□□ 0.77
RABGGTA-213ENST00000560127 ATRNO75882 1429 aa19.83■□□□□ 0.76
RABGGTA-213ENST00000560127 COL22A1Q8NFW1 1626 aaPredicted RBP19.83■□□□□ 0.76
RABGGTA-213ENST00000560127 ROCK1Q13464 1354 aa19.83■□□□□ 0.76
RABGGTA-213ENST00000560127 MARF1Q9Y4F3 1742 aaKnown RBP19.82■□□□□ 0.76
RABGGTA-213ENST00000560127 FNBP4Q8N3X1 1017 aaPredicted RBP19.82■□□□□ 0.76
RABGGTA-213ENST00000560127 PTCH1Q13635 1447 aa19.82■□□□□ 0.76
RABGGTA-213ENST00000560127 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
RABGGTA-213ENST00000560127 ZNF326Q5BKZ1 582 aaKnown RBP19.81■□□□□ 0.76
RABGGTA-213ENST00000560127 ORAI2Q96SN7 254 aa19.8■□□□□ 0.76
RABGGTA-213ENST00000560127 FOXD1Q16676 465 aa19.79■□□□□ 0.76
RABGGTA-213ENST00000560127 KIF1BO60333 1816 aa19.79■□□□□ 0.76
RABGGTA-213ENST00000560127 CLTCL1P53675 1640 aa19.78■□□□□ 0.76
RABGGTA-213ENST00000560127 MYOM2P54296 1465 aa19.75■□□□□ 0.75
RABGGTA-213ENST00000560127 BCL9LQ86UU0 1499 aa19.75■□□□□ 0.75
RABGGTA-213ENST00000560127 CCDC125Q86Z20 511 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms