RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 RICTORQ6R327 1708 aa11.01□□□□□ -0.65
SMAD3-212ENST00000559937 TSPOAP1O95153 1857 aa11□□□□□ -0.65
SMAD3-212ENST00000559937 NBPF1Q3BBV0 1214 aa11□□□□□ -0.65
SMAD3-212ENST00000559937 TESK2Q96S53 571 aa11□□□□□ -0.65
SMAD3-212ENST00000559937 SMG6Q86US8 1419 aaKnown RBP11□□□□□ -0.65
SMAD3-212ENST00000559937 ADGRB3O60242 1522 aa10.99□□□□□ -0.65
SMAD3-212ENST00000559937 SETBP1Q9Y6X0 1596 aa10.99□□□□□ -0.65
SMAD3-212ENST00000559937 CAMSAP1Q5T5Y3 1602 aa10.99□□□□□ -0.65
SMAD3-212ENST00000559937 MYOM1P52179 1685 aa10.99□□□□□ -0.65
SMAD3-212ENST00000559937 TMF1P82094 1093 aa10.99□□□□□ -0.65
SMAD3-212ENST00000559937 POLR3GLQ9BT43 218 aa10.99□□□□□ -0.65
SMAD3-212ENST00000559937 NRXN1Q9ULB1 1477 aa10.99□□□□□ -0.65
SMAD3-212ENST00000559937 KIF3BO15066 747 aa10.98□□□□□ -0.65
SMAD3-212ENST00000559937 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
SMAD3-212ENST00000559937 EIF3AQ14152 1382 aaKnown RBP10.98□□□□□ -0.65
SMAD3-212ENST00000559937 DISP3Q9P2K9 1392 aa10.98□□□□□ -0.65
SMAD3-212ENST00000559937 PNISRQ8TF01 805 aaKnown RBP10.97□□□□□ -0.65
SMAD3-212ENST00000559937 DIP2CQ9Y2E4 1556 aa10.97□□□□□ -0.65
SMAD3-212ENST00000559937 PIK3C2BO00750 1634 aa10.96□□□□□ -0.65
SMAD3-212ENST00000559937 CDCA8Q53HL2 280 aa10.96□□□□□ -0.65
SMAD3-212ENST00000559937 TMC1Q8TDI8 760 aa10.96□□□□□ -0.65
SMAD3-212ENST00000559937 ABCC3O15438 1527 aa10.95□□□□□ -0.66
SMAD3-212ENST00000559937 PER1O15534 1290 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-212ENST00000559937 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
SMAD3-212ENST00000559937 MYT1LQ9UL68 1186 aa10.94□□□□□ -0.66
SMAD3-212ENST00000559937 UGGT1Q9NYU2 1555 aa10.94□□□□□ -0.66
SMAD3-212ENST00000559937 SBNO2Q9Y2G9 1366 aa10.93□□□□□ -0.66
SMAD3-212ENST00000559937 TSHZ2Q9NRE2 1034 aa10.93□□□□□ -0.66
SMAD3-212ENST00000559937 SIGLEC1Q9BZZ2 1709 aa10.92□□□□□ -0.66
SMAD3-212ENST00000559937 NPC1L1Q9UHC9 1359 aa10.92□□□□□ -0.66
SMAD3-212ENST00000559937 CFAP65Q6ZU64 1925 aaKnown RBP10.92□□□□□ -0.66
SMAD3-212ENST00000559937 KDM4FA0A1W2PPD8 638 aa10.92□□□□□ -0.66
SMAD3-212ENST00000559937 BCANQ96GW7 911 aa10.92□□□□□ -0.66
SMAD3-212ENST00000559937 NUDCQ9Y266 331 aa10.92□□□□□ -0.66
SMAD3-212ENST00000559937 ARHGAP31Q2M1Z3 1444 aa10.92□□□□□ -0.66
SMAD3-212ENST00000559937 RNF123Q5XPI4 1314 aa10.91□□□□□ -0.66
SMAD3-212ENST00000559937 ASXL1Q8IXJ9 1541 aa10.91□□□□□ -0.66
SMAD3-212ENST00000559937 PPP4R2Q9NY27 417 aa10.91□□□□□ -0.66
SMAD3-212ENST00000559937 NOS1P29475 1434 aa10.91□□□□□ -0.66
SMAD3-212ENST00000559937 BLMP54132 1417 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-212ENST00000559937 NPATQ14207 1427 aa10.91□□□□□ -0.66
SMAD3-212ENST00000559937 RPGRIP1LQ68CZ1 1315 aa10.9□□□□□ -0.66
SMAD3-212ENST00000559937 QRICH2Q9H0J4 1663 aa10.9□□□□□ -0.66
SMAD3-212ENST00000559937 REREQ9P2R6 1566 aa10.9□□□□□ -0.67
SMAD3-212ENST00000559937 PREX1Q8TCU6 1659 aa10.89□□□□□ -0.67
SMAD3-212ENST00000559937 ERVK-7P63135 1459 aa10.88□□□□□ -0.67
SMAD3-212ENST00000559937 PIK3C2GO75747 1445 aa10.88□□□□□ -0.67
SMAD3-212ENST00000559937 PDE3BQ13370 1112 aa10.88□□□□□ -0.67
SMAD3-212ENST00000559937 PANK3Q9H999 370 aa10.88□□□□□ -0.67
SMAD3-212ENST00000559937 USP32Q8NFA0 1604 aa10.87□□□□□ -0.67
SMAD3-212ENST00000559937 ADGRB1O14514 1584 aa10.87□□□□□ -0.67
SMAD3-212ENST00000559937 ARHGEF28Q8N1W1 1705 aaKnown RBP10.87□□□□□ -0.67
SMAD3-212ENST00000559937 NEXMIFQ5QGS0 1516 aa10.86□□□□□ -0.67
SMAD3-212ENST00000559937 MYO5BQ9ULV0 1848 aa10.85□□□□□ -0.67
SMAD3-212ENST00000559937 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
SMAD3-212ENST00000559937 ZFYVE9O95405 1425 aa10.84□□□□□ -0.67
SMAD3-212ENST00000559937 KNSTRNQ9Y448 316 aa10.84□□□□□ -0.67
SMAD3-212ENST00000559937 AGLP35573 1532 aa10.84□□□□□ -0.67
SMAD3-212ENST00000559937 CNGB1Q14028 1251 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-212ENST00000559937 AMER1Q5JTC6 1135 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-212ENST00000559937 CFAP70Q5T0N1 1121 aa10.82□□□□□ -0.68
SMAD3-212ENST00000559937 TMEM131LA2VDJ0 1609 aa10.82□□□□□ -0.68
SMAD3-212ENST00000559937 IRX6P78412 446 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-212ENST00000559937 CC2D1BQ5T0F9 858 aaKnown RBP10.81□□□□□ -0.68
SMAD3-212ENST00000559937 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
SMAD3-212ENST00000559937 C14orf93Q9H972 538 aaKnown RBP10.81□□□□□ -0.68
SMAD3-212ENST00000559937 CENPJQ9HC77 1338 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-212ENST00000559937 GGT6Q6P531 493 aa10.8□□□□□ -0.68
SMAD3-212ENST00000559937 YEATS2Q9ULM3 1422 aa10.8□□□□□ -0.68
SMAD3-212ENST00000559937 CLTCQ00610 1675 aaKnown RBP10.79□□□□□ -0.68
SMAD3-212ENST00000559937 PPP2R1AP30153 589 aa10.79□□□□□ -0.68
SMAD3-212ENST00000559937 MYT1Q01538 1121 aa10.79□□□□□ -0.68
SMAD3-212ENST00000559937 VGFO15240 615 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-212ENST00000559937 RAPGEF3O95398 923 aa10.78□□□□□ -0.68
SMAD3-212ENST00000559937 SLC52A1Q9NWF4 448 aa10.78□□□□□ -0.68
SMAD3-212ENST00000559937 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
SMAD3-212ENST00000559937 PPP6R1Q9UPN7 881 aa10.77□□□□□ -0.69
SMAD3-212ENST00000559937 NGEFQ8N5V2 710 aa10.76□□□□□ -0.69
SMAD3-212ENST00000559937 SHPRHQ149N8 1683 aa10.76□□□□□ -0.69
SMAD3-212ENST00000559937 ARHGEF40Q8TER5 1519 aa10.75□□□□□ -0.69
SMAD3-212ENST00000559937 TULP4Q9NRJ4 1543 aa10.75□□□□□ -0.69
SMAD3-212ENST00000559937 SPATA31D1Q6ZQQ2 1576 aa10.75□□□□□ -0.69
SMAD3-212ENST00000559937 CHGAP10645 457 aaKnown RBP10.75□□□□□ -0.69
SMAD3-212ENST00000559937 RRP1P56182 461 aaKnown RBP10.75□□□□□ -0.69
SMAD3-212ENST00000559937 WDR43Q15061 677 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMAD3-212ENST00000559937 RBM19Q9Y4C8 960 aaKnown RBP10.75□□□□□ -0.69
SMAD3-212ENST00000559937 RCAN3Q9UKA8 241 aa10.74□□□□□ -0.69
SMAD3-212ENST00000559937 POLR3AO14802 1390 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-212ENST00000559937 NSD2O96028 1365 aa10.74□□□□□ -0.69
SMAD3-212ENST00000559937 NINLQ9Y2I6 1382 aa10.74□□□□□ -0.69
SMAD3-212ENST00000559937 SETD1AO15047 1707 aaKnown RBP10.72□□□□□ -0.69
SMAD3-212ENST00000559937 ADAMTS8Q9UP79 889 aa10.72□□□□□ -0.69
SMAD3-212ENST00000559937 DLC1Q96QB1 1528 aa10.72□□□□□ -0.69
SMAD3-212ENST00000559937 IDI1Q13907 227 aa10.71□□□□□ -0.69
SMAD3-212ENST00000559937 B4GALNT3Q6L9W6 998 aa10.71□□□□□ -0.69
SMAD3-212ENST00000559937 EVC2Q86UK5 1308 aa10.71□□□□□ -0.69
SMAD3-212ENST00000559937 ZNF521Q96K83 1311 aa10.71□□□□□ -0.69
SMAD3-212ENST00000559937 NSD3Q9BZ95 1437 aa10.71□□□□□ -0.69
SMAD3-212ENST00000559937 FANCIQ9NVI1 1328 aa10.71□□□□□ -0.69
SMAD3-212ENST00000559937 ALKQ9UM73 1620 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms