RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 BCAR3O75815 825 aa28.36■■■□□ 2.13
PSMA4-215ENST00000559934 RNF17Q9BXT8 1623 aaKnown RBP28.33■■■□□ 2.13
PSMA4-215ENST00000559934 SYCP2Q9BX26 1530 aa28.33■■■□□ 2.13
PSMA4-215ENST00000559934 NUP160Q12769 1436 aa28.33■■■□□ 2.13
PSMA4-215ENST00000559934 PREX2Q70Z35 1606 aa28.32■■■□□ 2.12
PSMA4-215ENST00000559934 IGHDP01880 384 aa28.32■■■□□ 2.12
PSMA4-215ENST00000559934 TRMT2AQ8IZ69 625 aaKnown RBP28.31■■■□□ 2.12
PSMA4-215ENST00000559934 USP19O94966 1318 aa28.31■■■□□ 2.12
PSMA4-215ENST00000559934 CLASP1Q7Z460 1538 aa28.31■■■□□ 2.12
PSMA4-215ENST00000559934 EIF3AQ14152 1382 aaKnown RBP28.31■■■□□ 2.12
PSMA4-215ENST00000559934 IQGAP3Q86VI3 1631 aa28.3■■■□□ 2.12
PSMA4-215ENST00000559934 APAF1O14727 1248 aa28.29■■■□□ 2.12
PSMA4-215ENST00000559934 VIRMAQ69YN4 1812 aaKnown RBP28.28■■■□□ 2.12
PSMA4-215ENST00000559934 NKTRP30414 1462 aaKnown RBP28.27■■■□□ 2.12
PSMA4-215ENST00000559934 SEC24BO95487 1268 aa28.27■■■□□ 2.12
PSMA4-215ENST00000559934 EIF5BO60841 1220 aaKnown RBP28.27■■■□□ 2.12
PSMA4-215ENST00000559934 RSPH4AQ5TD94 716 aa28.27■■■□□ 2.12
PSMA4-215ENST00000559934 DMRT2Q9Y5R5 561 aa28.27■■■□□ 2.12
PSMA4-215ENST00000559934 ASXL1Q8IXJ9 1541 aa28.25■■■□□ 2.11
PSMA4-215ENST00000559934 POGKQ9P215 609 aa28.24■■■□□ 2.11
PSMA4-215ENST00000559934 PIK3C2GO75747 1445 aa28.24■■■□□ 2.11
PSMA4-215ENST00000559934 IQGAP1P46940 1657 aa28.23■■■□□ 2.11
PSMA4-215ENST00000559934 SYNMO15061 1565 aa28.22■■■□□ 2.11
PSMA4-215ENST00000559934 MAST1Q9Y2H9 1570 aa28.21■■■□□ 2.11
PSMA4-215ENST00000559934 ATP10AO60312 1499 aa28.2■■■□□ 2.11
PSMA4-215ENST00000559934 ARHGAP5Q13017 1502 aa28.2■■■□□ 2.1
PSMA4-215ENST00000559934 MADDQ8WXG6 1647 aa28.19■■■□□ 2.1
PSMA4-215ENST00000559934 SLKQ9H2G2 1235 aaPredicted RBP28.19■■■□□ 2.1
PSMA4-215ENST00000559934 ABCC2Q92887 1545 aa28.18■■■□□ 2.1
PSMA4-215ENST00000559934 FAM43AQ8N2R8 423 aa28.18■■■□□ 2.1
PSMA4-215ENST00000559934 PANK1Q8TE04 598 aa28.18■■■□□ 2.1
PSMA4-215ENST00000559934 MYOM1P52179 1685 aa28.18■■■□□ 2.1
PSMA4-215ENST00000559934 E9PSI1 815 aa28.17■■■□□ 2.1
PSMA4-215ENST00000559934 TTC37Q6PGP7 1564 aa28.17■■■□□ 2.1
PSMA4-215ENST00000559934 COG6Q9Y2V7 657 aa28.17■■■□□ 2.1
PSMA4-215ENST00000559934 PLXNC1O60486 1568 aa28.15■■■□□ 2.1
PSMA4-215ENST00000559934 CLUAP1Q96AJ1 413 aa28.14■■■□□ 2.1
PSMA4-215ENST00000559934 CDCA8Q53HL2 280 aa28.13■■■□□ 2.09
PSMA4-215ENST00000559934 CGNL1Q0VF96 1302 aa28.13■■■□□ 2.09
PSMA4-215ENST00000559934 NLRP1Q9C000 1473 aa28.13■■■□□ 2.09
PSMA4-215ENST00000559934 CANXP27824 592 aaKnown RBP28.12■■■□□ 2.09
PSMA4-215ENST00000559934 SCAF11Q99590 1463 aaKnown RBP28.11■■■□□ 2.09
PSMA4-215ENST00000559934 MAPK8IP3Q9UPT6 1336 aa28.1■■■□□ 2.09
PSMA4-215ENST00000559934 BECN1Q14457 450 aa28.1■■■□□ 2.09
PSMA4-215ENST00000559934 CENPJQ9HC77 1338 aaPredicted RBP28.1■■■□□ 2.09
PSMA4-215ENST00000559934 DUOX2Q9NRD8 1548 aa28.1■■■□□ 2.09
PSMA4-215ENST00000559934 PDE3AQ14432 1141 aa28.1■■■□□ 2.09
PSMA4-215ENST00000559934 NPC1L1Q9UHC9 1359 aa28.08■■■□□ 2.09
PSMA4-215ENST00000559934 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
PSMA4-215ENST00000559934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.08■■■□□ 2.082e-6■■□□□ 11.5
PSMA4-215ENST00000559934 UBE2Q2Q8WVN8 375 aa28.05■■■□□ 2.08
PSMA4-215ENST00000559934 ANTXR1Q9H6X2 564 aa28.05■■■□□ 2.08
PSMA4-215ENST00000559934 SPHKAPQ2M3C7 1700 aa28.04■■■□□ 2.08
PSMA4-215ENST00000559934 RSPH6AQ9H0K4 717 aa28.04■■■□□ 2.08
PSMA4-215ENST00000559934 WWC1Q8IX03 1113 aa28.03■■■□□ 2.08
PSMA4-215ENST00000559934 TNNQ9UQP3 1299 aa28.03■■■□□ 2.08
PSMA4-215ENST00000559934 KDM5AP29375 1690 aaKnown RBP28.02■■■□□ 2.08
PSMA4-215ENST00000559934 CARD14Q9BXL6 1004 aa28.02■■■□□ 2.08
PSMA4-215ENST00000559934 RRAGDQ9NQL2 400 aaPredicted RBP28.02■■■□□ 2.08
PSMA4-215ENST00000559934 ARXQ96QS3 562 aa28.01■■■□□ 2.07
PSMA4-215ENST00000559934 NEUROD2Q15784 382 aa28■■■□□ 2.07
PSMA4-215ENST00000559934 SCAPERQ9BY12 1400 aa28■■■□□ 2.07
PSMA4-215ENST00000559934 PCDHB15Q9Y5E8 787 aa28■■■□□ 2.07
PSMA4-215ENST00000559934 CEP152O94986 1710 aa28■■■□□ 2.07
PSMA4-215ENST00000559934 NINLQ9Y2I6 1382 aa27.99■■■□□ 2.07
PSMA4-215ENST00000559934 RRP7AQ9Y3A4 280 aaKnown RBP27.98■■■□□ 2.07
PSMA4-215ENST00000559934 RLBP1P12271 317 aa27.98■■■□□ 2.07
PSMA4-215ENST00000559934 TBC1D2Q9BYX2 928 aa27.98■■■□□ 2.07
PSMA4-215ENST00000559934 TBC1D32Q96NH3 1257 aa27.97■■■□□ 2.07
PSMA4-215ENST00000559934 SPRYD3Q8NCJ5 442 aa27.96■■■□□ 2.07
PSMA4-215ENST00000559934 CLTCL1P53675 1640 aa27.96■■■□□ 2.07
PSMA4-215ENST00000559934 BCL2L13Q9BXK5 485 aa27.95■■■□□ 2.07
PSMA4-215ENST00000559934 PDZRN3Q9UPQ7 1066 aa27.95■■■□□ 2.07
PSMA4-215ENST00000559934 TRPM2O94759 1503 aa27.94■■■□□ 2.06
PSMA4-215ENST00000559934 RARSP54136 660 aaKnown RBP27.94■■■□□ 2.06
PSMA4-215ENST00000559934 UPF2Q9HAU5 1272 aaKnown RBP27.94■■■□□ 2.06
PSMA4-215ENST00000559934 L1TD1Q5T7N2 865 aaKnown RBP27.93■■■□□ 2.06
PSMA4-215ENST00000559934 ERVK-7P63135 1459 aa27.93■■■□□ 2.06
PSMA4-215ENST00000559934 PMFBP1Q8TBY8 1022 aa27.93■■■□□ 2.06
PSMA4-215ENST00000559934 NGEFQ8N5V2 710 aa27.92■■■□□ 2.06
PSMA4-215ENST00000559934 CFAP70Q5T0N1 1121 aa27.9■■■□□ 2.06
PSMA4-215ENST00000559934 TNNT2P45379 298 aaPredicted RBP27.9■■■□□ 2.06
PSMA4-215ENST00000559934 POLR3AO14802 1390 aaPredicted RBP27.88■■■□□ 2.05
PSMA4-215ENST00000559934 TRAPPC8Q9Y2L5 1435 aa27.87■■■□□ 2.05
PSMA4-215ENST00000559934 GZF1Q9H116 711 aaPredicted RBP27.87■■■□□ 2.05
PSMA4-215ENST00000559934 XRCC6P12956 609 aaKnown RBP eCLIP27.86■■■□□ 2.05
PSMA4-215ENST00000559934 SHPRHQ149N8 1683 aa27.86■■■□□ 2.05
PSMA4-215ENST00000559934 PTPRTO14522 1441 aa27.85■■■□□ 2.05
PSMA4-215ENST00000559934 TCP11L2Q8N4U5 519 aa27.85■■■□□ 2.05
PSMA4-215ENST00000559934 PANK2Q9BZ23 570 aa27.83■■■□□ 2.05
PSMA4-215ENST00000559934 STAC3Q96MF2 364 aa27.83■■■□□ 2.04
PSMA4-215ENST00000559934 MCM4P33991 863 aa27.82■■■□□ 2.04
PSMA4-215ENST00000559934 RUNDC1Q96C34 613 aa27.82■■■□□ 2.04
PSMA4-215ENST00000559934 GOLGA6L3A6NEY3 463 aa27.82■■■□□ 2.04
PSMA4-215ENST00000559934 KIAA1210Q9ULL0 1709 aa27.81■■■□□ 2.04
PSMA4-215ENST00000559934 ADGRF5Q8IZF2 1346 aa27.81■■■□□ 2.04
PSMA4-215ENST00000559934 RWDD1Q9H446 243 aaPredicted RBP27.8■■■□□ 2.04
PSMA4-215ENST00000559934 ABCA6Q8N139 1617 aa27.79■■■□□ 2.04
PSMA4-215ENST00000559934 IQSEC2Q5JU85 1478 aa27.79■■■□□ 2.04
PSMA4-215ENST00000559934 FSD2A1L4K1 749 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms