RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 TONSLQ96HA7 1378 aa20.69■□□□□ 0.9
SMAD6-204ENST00000559931 SPATA31E1Q6ZUB1 1445 aa20.69■□□□□ 0.9
SMAD6-204ENST00000559931 TXNDC2Q86VQ3 553 aa20.68■□□□□ 0.9
SMAD6-204ENST00000559931 DCAF11Q8TEB1 546 aa20.68■□□□□ 0.9
SMAD6-204ENST00000559931 ANKLE2Q86XL3 938 aa20.67■□□□□ 0.9
SMAD6-204ENST00000559931 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.67■□□□□ 0.9
SMAD6-204ENST00000559931 BCANQ96GW7 911 aa20.67■□□□□ 0.9
SMAD6-204ENST00000559931 TMEM2Q9UHN6 1383 aa20.67■□□□□ 0.9
SMAD6-204ENST00000559931 L3MBTL2Q969R5 705 aa20.66■□□□□ 0.9
SMAD6-204ENST00000559931 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
SMAD6-204ENST00000559931 RIMS2Q9UQ26 1411 aa20.66■□□□□ 0.9
SMAD6-204ENST00000559931 POLR1AO95602 1720 aaPredicted RBP20.65■□□□□ 0.9
SMAD6-204ENST00000559931 VGFO15240 615 aaPredicted RBP20.64■□□□□ 0.89
SMAD6-204ENST00000559931 NEURL4Q96JN8 1562 aa20.63■□□□□ 0.89
SMAD6-204ENST00000559931 LTKP29376 864 aa20.62■□□□□ 0.89
SMAD6-204ENST00000559931 DMRT2Q9Y5R5 561 aa20.61■□□□□ 0.89
SMAD6-204ENST00000559931 SLIT1O75093 1534 aa20.6■□□□□ 0.89
SMAD6-204ENST00000559931 TIMELESSQ9UNS1 1208 aa20.6■□□□□ 0.89
SMAD6-204ENST00000559931 PPLO60437 1756 aa20.59■□□□□ 0.89
SMAD6-204ENST00000559931 ARHGAP23Q9P227 1491 aa20.59■□□□□ 0.89
SMAD6-204ENST00000559931 STAC3Q96MF2 364 aa20.59■□□□□ 0.89
SMAD6-204ENST00000559931 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
SMAD6-204ENST00000559931 NEXMIFQ5QGS0 1516 aa20.58■□□□□ 0.89
SMAD6-204ENST00000559931 SCAF11Q99590 1463 aaKnown RBP20.57■□□□□ 0.88
SMAD6-204ENST00000559931 ADGRF5Q8IZF2 1346 aa20.56■□□□□ 0.88
SMAD6-204ENST00000559931 IFT172Q9UG01 1749 aa20.56■□□□□ 0.88
SMAD6-204ENST00000559931 NPHP4O75161 1426 aaPredicted RBP20.54■□□□□ 0.88
SMAD6-204ENST00000559931 IQGAP1P46940 1657 aa20.53■□□□□ 0.88
SMAD6-204ENST00000559931 MED14O60244 1454 aa20.51■□□□□ 0.87
SMAD6-204ENST00000559931 PLEKHG1Q9ULL1 1385 aa20.51■□□□□ 0.87
SMAD6-204ENST00000559931 SLC26A8Q96RN1 970 aa20.51■□□□□ 0.87
SMAD6-204ENST00000559931 MYOM2P54296 1465 aa20.5■□□□□ 0.87
SMAD6-204ENST00000559931 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
SMAD6-204ENST00000559931 CFAP70Q5T0N1 1121 aa20.47■□□□□ 0.87
SMAD6-204ENST00000559931 NBPF8Q3BBV2 869 aa20.46■□□□□ 0.87
SMAD6-204ENST00000559931 PRAG1Q86YV5 1406 aa20.45■□□□□ 0.86
SMAD6-204ENST00000559931 C14orf93Q9H972 538 aaKnown RBP20.45■□□□□ 0.86
SMAD6-204ENST00000559931 TBX22Q9Y458 520 aa20.45■□□□□ 0.86
SMAD6-204ENST00000559931 ZNF335Q9H4Z2 1342 aaPredicted RBP20.45■□□□□ 0.86
SMAD6-204ENST00000559931 PIK3C2GO75747 1445 aa20.44■□□□□ 0.86
SMAD6-204ENST00000559931 NRXN1Q9ULB1 1477 aa20.44■□□□□ 0.86
SMAD6-204ENST00000559931 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
SMAD6-204ENST00000559931 TMEM132EQ6IEE7 984 aa20.42■□□□□ 0.86
SMAD6-204ENST00000559931 ALKQ9UM73 1620 aa20.42■□□□□ 0.86
SMAD6-204ENST00000559931 ADAMTS13Q76LX8 1427 aa20.41■□□□□ 0.86
SMAD6-204ENST00000559931 NRXN3Q9Y4C0 1643 aa20.4■□□□□ 0.86
SMAD6-204ENST00000559931 NBPF1Q3BBV0 1214 aa20.39■□□□□ 0.85
SMAD6-204ENST00000559931 STK26Q9P289 416 aa20.39■□□□□ 0.85
SMAD6-204ENST00000559931 ROCK2O75116 1388 aaKnown RBP20.37■□□□□ 0.85
SMAD6-204ENST00000559931 METP08581 1390 aa20.37■□□□□ 0.85
SMAD6-204ENST00000559931 STRCP1A6NGW2 1772 aa20.37■□□□□ 0.85
SMAD6-204ENST00000559931 LAMC1P11047 1609 aa20.37■□□□□ 0.85
SMAD6-204ENST00000559931 LTBP4Q8N2S1 1624 aa20.37■□□□□ 0.85
SMAD6-204ENST00000559931 DIP2AQ14689 1571 aa20.37■□□□□ 0.85
SMAD6-204ENST00000559931 KIAA1210Q9ULL0 1709 aa20.36■□□□□ 0.85
SMAD6-204ENST00000559931 TRPM1Q7Z4N2 1603 aa20.35■□□□□ 0.85
SMAD6-204ENST00000559931 CERKQ8TCT0 537 aa20.34■□□□□ 0.85
SMAD6-204ENST00000559931 CARD11Q9BXL7 1154 aa20.34■□□□□ 0.85
SMAD6-204ENST00000559931 AMOTL2Q9Y2J4 779 aa20.34■□□□□ 0.85
SMAD6-204ENST00000559931 KCNA6P17658 529 aa20.32■□□□□ 0.84
SMAD6-204ENST00000559931 TRAK1Q9UPV9 953 aa20.32■□□□□ 0.84
SMAD6-204ENST00000559931 SETD1AO15047 1707 aaKnown RBP20.32■□□□□ 0.84
SMAD6-204ENST00000559931 PIK3R4Q99570 1358 aa20.32■□□□□ 0.84
SMAD6-204ENST00000559931 CHD2O14647 1828 aaKnown RBP20.31■□□□□ 0.84
SMAD6-204ENST00000559931 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
SMAD6-204ENST00000559931 YTHDC2Q9H6S0 1430 aaKnown RBP20.29■□□□□ 0.84
SMAD6-204ENST00000559931 LRPPRCP42704 1394 aaKnown RBP20.29■□□□□ 0.84
SMAD6-204ENST00000559931 CPS1P31327 1500 aa20.28■□□□□ 0.84
SMAD6-204ENST00000559931 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
SMAD6-204ENST00000559931 ADGRB1O14514 1584 aa20.27■□□□□ 0.84
SMAD6-204ENST00000559931 PROSER2Q86WR7 435 aaPredicted RBP20.27■□□□□ 0.84
SMAD6-204ENST00000559931 POGKQ9P215 609 aa20.27■□□□□ 0.84
SMAD6-204ENST00000559931 ASXL1Q8IXJ9 1541 aa20.27■□□□□ 0.83
SMAD6-204ENST00000559931 ABCC11Q96J66 1382 aa20.25■□□□□ 0.83
SMAD6-204ENST00000559931 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
SMAD6-204ENST00000559931 RBM33Q96EV2 1170 aaKnown RBP20.24■□□□□ 0.83
SMAD6-204ENST00000559931 LRRC7Q96NW7 1537 aa20.23■□□□□ 0.83
SMAD6-204ENST00000559931 SAFB2Q14151 953 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMAD6-204ENST00000559931 NWD1Q149M9 1564 aa20.23■□□□□ 0.83
SMAD6-204ENST00000559931 WAPLQ7Z5K2 1190 aa20.23■□□□□ 0.83
SMAD6-204ENST00000559931 C14orf37Q86TY3 774 aa20.23■□□□□ 0.83
SMAD6-204ENST00000559931 PRAM1Q96QH2 718 aa20.23■□□□□ 0.83
SMAD6-204ENST00000559931 XIRP1Q702N8 1843 aaKnown RBP20.22■□□□□ 0.83
SMAD6-204ENST00000559931 EIF3AQ14152 1382 aaKnown RBP20.21■□□□□ 0.83
SMAD6-204ENST00000559931 ROBO2Q9HCK4 1378 aa20.21■□□□□ 0.83
SMAD6-204ENST00000559931 XRN1Q8IZH2 1706 aaKnown RBP20.2■□□□□ 0.82
SMAD6-204ENST00000559931 EIF4G2P78344 907 aaKnown RBP eCLIP20.2■□□□□ 0.825e-6■■■■□ 19.7
SMAD6-204ENST00000559931 SIRT1Q96EB6 747 aa20.2■□□□□ 0.82
SMAD6-204ENST00000559931 USP47Q96K76 1375 aa20.19■□□□□ 0.82
SMAD6-204ENST00000559931 KNDC1Q76NI1 1749 aa20.19■□□□□ 0.82
SMAD6-204ENST00000559931 NKTRP30414 1462 aaKnown RBP20.18■□□□□ 0.82
SMAD6-204ENST00000559931 CENPJQ9HC77 1338 aaPredicted RBP20.18■□□□□ 0.82
SMAD6-204ENST00000559931 TMEM94Q12767 1356 aa20.18■□□□□ 0.82
SMAD6-204ENST00000559931 TECPR2O15040 1411 aa20.18■□□□□ 0.82
SMAD6-204ENST00000559931 IQSEC2Q5JU85 1478 aa20.17■□□□□ 0.82
SMAD6-204ENST00000559931 DLC1Q96QB1 1528 aa20.17■□□□□ 0.82
SMAD6-204ENST00000559931 ST20-MTHFSA0A0A6YYL1 179 aa20.16■□□□□ 0.82
SMAD6-204ENST00000559931 PLEKHH1Q9ULM0 1364 aa20.16■□□□□ 0.82
SMAD6-204ENST00000559931 PTCH1Q13635 1447 aa20.16■□□□□ 0.82
SMAD6-204ENST00000559931 FAM135BQ49AJ0 1406 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms