RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 PANK3Q9H999 370 aa8.38□□□□□ -1.07
ZEB1-217ENST00000559858 CLASP1Q7Z460 1538 aa8.38□□□□□ -1.07
ZEB1-217ENST00000559858 HS1BP3Q53T59 392 aa8.38□□□□□ -1.07
ZEB1-217ENST00000559858 UTP14CQ5TAP6 766 aaKnown RBP8.38□□□□□ -1.07
ZEB1-217ENST00000559858 ZNF692Q9BU19 519 aaPredicted RBP8.38□□□□□ -1.07
ZEB1-217ENST00000559858 C22orf23Q9BZE7 217 aa8.38□□□□□ -1.07
ZEB1-217ENST00000559858 ANKRD30AQ9BXX3 1397 aa8.38□□□□□ -1.07
ZEB1-217ENST00000559858 RAD54L2Q9Y4B4 1467 aa8.38□□□□□ -1.07
ZEB1-217ENST00000559858 NCLP19338 710 aaKnown RBP8.38□□□□□ -1.07
ZEB1-217ENST00000559858 CIZ1Q9ULV3 898 aaPredicted RBP8.38□□□□□ -1.07
ZEB1-217ENST00000559858 R3HCC1Q9Y3T6 440 aaKnown RBP8.38□□□□□ -1.07
ZEB1-217ENST00000559858 NESP48681 1621 aa8.37□□□□□ -1.07
ZEB1-217ENST00000559858 DYNC1I1O14576 645 aa8.37□□□□□ -1.07
ZEB1-217ENST00000559858 NASPP49321 788 aaPredicted RBP8.37□□□□□ -1.07
ZEB1-217ENST00000559858 E9PSI1 815 aa8.37□□□□□ -1.07
ZEB1-217ENST00000559858 PDZRN3Q9UPQ7 1066 aa8.37□□□□□ -1.07
ZEB1-217ENST00000559858 DDIT3P35638 169 aa8.36□□□□□ -1.07
ZEB1-217ENST00000559858 PDE4CQ08493 712 aa8.36□□□□□ -1.07
ZEB1-217ENST00000559858 ZNF644Q9H582 1327 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-217ENST00000559858 SCAPERQ9BY12 1400 aa8.36□□□□□ -1.07
ZEB1-217ENST00000559858 UQCRHLA0A096LP55 91 aa8.36□□□□□ -1.07
ZEB1-217ENST00000559858 ZNF500O60304 480 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-217ENST00000559858 UQCRHP07919 91 aa8.36□□□□□ -1.07
ZEB1-217ENST00000559858 CANXP27824 592 aaKnown RBP8.36□□□□□ -1.07
ZEB1-217ENST00000559858 TNPO1Q92973 898 aaKnown RBP8.36□□□□□ -1.07
ZEB1-217ENST00000559858 COG6Q9Y2V7 657 aa8.36□□□□□ -1.07
ZEB1-217ENST00000559858 PPP2R1AP30153 589 aa8.35□□□□□ -1.07
ZEB1-217ENST00000559858 CSPP1Q1MSJ5 1256 aa8.35□□□□□ -1.07
ZEB1-217ENST00000559858 KIAA0586Q9BVV6 1533 aa8.35□□□□□ -1.07
ZEB1-217ENST00000559858 COL17A1Q9UMD9 1497 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-217ENST00000559858 NCOA3Q9Y6Q9 1424 aa8.35□□□□□ -1.07
ZEB1-217ENST00000559858 DMTNQ08495 405 aa8.35□□□□□ -1.07
ZEB1-217ENST00000559858 NGEFQ8N5V2 710 aa8.35□□□□□ -1.07
ZEB1-217ENST00000559858 PANK1Q8TE04 598 aa8.35□□□□□ -1.07
ZEB1-217ENST00000559858 RWDD1Q9H446 243 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-217ENST00000559858 NOL7Q9UMY1 257 aaKnown RBP8.34□□□□□ -1.07
ZEB1-217ENST00000559858 PPP6R1Q9UPN7 881 aa8.34□□□□□ -1.07
ZEB1-217ENST00000559858 RTEL1-TNFRSF6BF6WH68 1400 aa8.34□□□□□ -1.07
ZEB1-217ENST00000559858 IBTKQ9P2D0 1353 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-217ENST00000559858 SMC5Q8IY18 1101 aa8.34□□□□□ -1.07
ZEB1-217ENST00000559858 SNX21Q969T3 373 aa8.34□□□□□ -1.07
ZEB1-217ENST00000559858 SPINK5Q9NQ38 1064 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-217ENST00000559858 ZHX1Q9UKY1 873 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-217ENST00000559858 CDK13Q14004 1512 aaKnown RBP8.34□□□□□ -1.07
ZEB1-217ENST00000559858 TNNT2P45379 298 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-217ENST00000559858 MFAP1P55081 439 aaKnown RBP8.33□□□□□ -1.08
ZEB1-217ENST00000559858 RAB3GAP1Q15042 981 aa8.33□□□□□ -1.08
ZEB1-217ENST00000559858 DNMBPQ6XZF7 1577 aa8.33□□□□□ -1.08
ZEB1-217ENST00000559858 POLA1P09884 1462 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-217ENST00000559858 TMF1P82094 1093 aa8.33□□□□□ -1.08
ZEB1-217ENST00000559858 TESK2Q96S53 571 aa8.33□□□□□ -1.08
ZEB1-217ENST00000559858 CCDC94Q9BW85 323 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-217ENST00000559858 DISP3Q9P2K9 1392 aa8.33□□□□□ -1.08
ZEB1-217ENST00000559858 GOLGA6L22H0YM25 854 aa8.32□□□□□ -1.08
ZEB1-217ENST00000559858 MCM5P33992 734 aa8.32□□□□□ -1.08
ZEB1-217ENST00000559858 PCDHB15Q9Y5E8 787 aa8.32□□□□□ -1.08
ZEB1-217ENST00000559858 ADGRL2O95490 1459 aa8.32□□□□□ -1.08
ZEB1-217ENST00000559858 ADGBQ8N7X0 1667 aa8.32□□□□□ -1.08
ZEB1-217ENST00000559858 CAMSAP2Q08AD1 1489 aa8.32□□□□□ -1.08
ZEB1-217ENST00000559858 APAF1O14727 1248 aa8.32□□□□□ -1.08
ZEB1-217ENST00000559858 KNSTRNQ9Y448 316 aa8.32□□□□□ -1.08
ZEB1-217ENST00000559858 NUP155O75694 1391 aa8.32□□□□□ -1.08
ZEB1-217ENST00000559858 GPRASP1Q5JY77 1395 aa8.32□□□□□ -1.08
ZEB1-217ENST00000559858 HSP90AB1P08238 724 aaKnown RBP8.31□□□□□ -1.08
ZEB1-217ENST00000559858 SASS6Q6UVJ0 657 aa8.31□□□□□ -1.08
ZEB1-217ENST00000559858 ERBINQ96RT1 1412 aa8.31□□□□□ -1.08
ZEB1-217ENST00000559858 CEP170Q5SW79 1584 aa8.31□□□□□ -1.08
ZEB1-217ENST00000559858 PRAG1Q86YV5 1406 aa8.31□□□□□ -1.08
ZEB1-217ENST00000559858 GTPBP4Q9BZE4 634 aaKnown RBP8.31□□□□□ -1.08
ZEB1-217ENST00000559858 PRDM10Q9NQV6 1147 aa8.31□□□□□ -1.08
ZEB1-217ENST00000559858 TRPM1Q7Z4N2 1603 aa8.31□□□□□ -1.08
ZEB1-217ENST00000559858 ANKRD50Q9ULJ7 1429 aa8.31□□□□□ -1.08
ZEB1-217ENST00000559858 KLHL40Q2TBA0 621 aa8.31□□□□□ -1.08
ZEB1-217ENST00000559858 CCDC146Q8IYE0 955 aa8.31□□□□□ -1.08
ZEB1-217ENST00000559858 WDR62O43379 1518 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 ZSCAN20P17040 1043 aaPredicted RBP8.3□□□□□ -1.08
ZEB1-217ENST00000559858 ZNF445P59923 1031 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 XPCQ01831 940 aaPredicted RBP8.3□□□□□ -1.08
ZEB1-217ENST00000559858 NBPF1Q3BBV0 1214 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 FANCD2Q9BXW9 1451 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 PIK3C2GO75747 1445 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 TOPBP1Q92547 1522 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 ABCC2Q92887 1545 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 KIF20AO95235 890 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 RBM25P49756 843 aaKnown RBP8.3□□□□□ -1.08
ZEB1-217ENST00000559858 CLEC17AQ6ZS10 378 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 BBXQ8WY36 941 aaPredicted RBP8.3□□□□□ -1.08
ZEB1-217ENST00000559858 PDLIM2Q96JY6 352 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 ZKSCAN5Q9Y2L8 839 aa8.3□□□□□ -1.08
ZEB1-217ENST00000559858 DDX49Q9Y6V7 483 aaKnown RBP8.3□□□□□ -1.08
ZEB1-217ENST00000559858 PLXNC1O60486 1568 aa8.29□□□□□ -1.08
ZEB1-217ENST00000559858 ARID3CA6NKF2 412 aa8.29□□□□□ -1.08
ZEB1-217ENST00000559858 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.29□□□□□ -1.08
ZEB1-217ENST00000559858 ARID3AQ99856 593 aa8.29□□□□□ -1.08
ZEB1-217ENST00000559858 CFDP1Q9UEE9 299 aaPredicted RBP8.29□□□□□ -1.08
ZEB1-217ENST00000559858 LAMC1P11047 1609 aa8.29□□□□□ -1.08
ZEB1-217ENST00000559858 AMER1Q5JTC6 1135 aaPredicted RBP8.28□□□□□ -1.08
ZEB1-217ENST00000559858 KDM5DQ9BY66 1539 aa8.28□□□□□ -1.08
ZEB1-217ENST00000559858 RARSP54136 660 aaKnown RBP8.28□□□□□ -1.08
ZEB1-217ENST00000559858 PPP4R3BQ5MIZ7 849 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms