RNA–Protein interactions for RNA: ENST00000559827.1

LINS1-206, Transcript of lines homolog 1, humanhuman

TSL 4

Gene LINS1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-206ENST00000559827 CHGAP10645 457 aaKnown RBP28.84■■■□□ 2.21
LINS1-206ENST00000559827 NEXMIFQ5QGS0 1516 aa28.84■■■□□ 2.21
LINS1-206ENST00000559827 LTKP29376 864 aa28.83■■■□□ 2.21
LINS1-206ENST00000559827 ILDR1Q86SU0 546 aaPredicted RBP28.83■■■□□ 2.21
LINS1-206ENST00000559827 EID1Q9Y6B2 187 aa28.82■■■□□ 2.2
LINS1-206ENST00000559827 NPHP4O75161 1426 aaPredicted RBP28.82■■■□□ 2.2
LINS1-206ENST00000559827 TXNDC2Q86VQ3 553 aa28.8■■■□□ 2.2
LINS1-206ENST00000559827 PPLO60437 1756 aa28.79■■■□□ 2.2
LINS1-206ENST00000559827 IFT172Q9UG01 1749 aa28.79■■■□□ 2.2
LINS1-206ENST00000559827 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.77■■■□□ 2.2
LINS1-206ENST00000559827 HDGFP51858 240 aaKnown RBP28.76■■■□□ 2.19
LINS1-206ENST00000559827 PLEKHG1Q9ULL1 1385 aa28.75■■■□□ 2.19
LINS1-206ENST00000559827 RPGRIP1LQ68CZ1 1315 aa28.74■■■□□ 2.19
LINS1-206ENST00000559827 ZNF326Q5BKZ1 582 aaKnown RBP28.73■■■□□ 2.19
LINS1-206ENST00000559827 SETBP1Q9Y6X0 1596 aa28.71■■■□□ 2.19
LINS1-206ENST00000559827 DIP2AQ14689 1571 aa28.69■■■□□ 2.18
LINS1-206ENST00000559827 NRXN3Q9Y4C0 1643 aa28.69■■■□□ 2.18
LINS1-206ENST00000559827 PPP1R15AO75807 674 aaPredicted RBP28.68■■■□□ 2.18
LINS1-206ENST00000559827 ADAMTS13Q76LX8 1427 aa28.64■■■□□ 2.18
LINS1-206ENST00000559827 MYOM2P54296 1465 aa28.64■■■□□ 2.17
LINS1-206ENST00000559827 NUTM2DQ5VT03 806 aaPredicted RBP28.63■■■□□ 2.17
LINS1-206ENST00000559827 VGFO15240 615 aaPredicted RBP28.62■■■□□ 2.17
LINS1-206ENST00000559827 RGL3Q3MIN7 710 aa28.62■■■□□ 2.17
LINS1-206ENST00000559827 LTBP4Q8N2S1 1624 aa28.61■■■□□ 2.17
LINS1-206ENST00000559827 NRXN1Q9ULB1 1477 aa28.6■■■□□ 2.17
LINS1-206ENST00000559827 SETD1AO15047 1707 aaKnown RBP28.59■■■□□ 2.17
LINS1-206ENST00000559827 NWD1Q149M9 1564 aa28.57■■■□□ 2.16
LINS1-206ENST00000559827 STRCP1A6NGW2 1772 aa28.56■■■□□ 2.16
LINS1-206ENST00000559827 PIK3C2GO75747 1445 aa28.56■■■□□ 2.16
LINS1-206ENST00000559827 ZNF335Q9H4Z2 1342 aaPredicted RBP28.55■■■□□ 2.16
LINS1-206ENST00000559827 TBX22Q9Y458 520 aa28.55■■■□□ 2.16
LINS1-206ENST00000559827 SLC26A8Q96RN1 970 aa28.54■■■□□ 2.16
LINS1-206ENST00000559827 CHD2O14647 1828 aaKnown RBP28.54■■■□□ 2.16
LINS1-206ENST00000559827 CPS1P31327 1500 aa28.53■■■□□ 2.16
LINS1-206ENST00000559827 PIK3R4Q99570 1358 aa28.53■■■□□ 2.16
LINS1-206ENST00000559827 STAC3Q96MF2 364 aa28.53■■■□□ 2.16
LINS1-206ENST00000559827 ALKQ9UM73 1620 aa28.53■■■□□ 2.16
LINS1-206ENST00000559827 ADGRF5Q8IZF2 1346 aa28.52■■■□□ 2.16
LINS1-206ENST00000559827 CLSPNQ9HAW4 1339 aa28.52■■■□□ 2.16
LINS1-206ENST00000559827 FBXO41Q8TF61 875 aa28.52■■■□□ 2.16
LINS1-206ENST00000559827 BCANQ96GW7 911 aa28.52■■■□□ 2.16
LINS1-206ENST00000559827 SIN3AQ96ST3 1273 aa28.52■■■□□ 2.16
LINS1-206ENST00000559827 LAMC1P11047 1609 aa28.51■■■□□ 2.15
LINS1-206ENST00000559827 NKTRP30414 1462 aaKnown RBP28.47■■■□□ 2.15
LINS1-206ENST00000559827 XRN1Q8IZH2 1706 aaKnown RBP28.47■■■□□ 2.15
LINS1-206ENST00000559827 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
LINS1-206ENST00000559827 CERKQ8TCT0 537 aa28.45■■■□□ 2.14
LINS1-206ENST00000559827 DCAF11Q8TEB1 546 aa28.45■■■□□ 2.14
LINS1-206ENST00000559827 IQSEC2Q5JU85 1478 aa28.43■■■□□ 2.14
LINS1-206ENST00000559827 METP08581 1390 aa28.43■■■□□ 2.14
LINS1-206ENST00000559827 KCNA6P17658 529 aa28.43■■■□□ 2.14
LINS1-206ENST00000559827 ASXL1Q8IXJ9 1541 aa28.43■■■□□ 2.14
LINS1-206ENST00000559827 PRAG1Q86YV5 1406 aa28.43■■■□□ 2.14
LINS1-206ENST00000559827 PTPRUQ92729 1446 aa28.43■■■□□ 2.14
LINS1-206ENST00000559827 NEUROD1Q13562 356 aa28.42■■■□□ 2.14
LINS1-206ENST00000559827 LRRC7Q96NW7 1537 aa28.4■■■□□ 2.14
LINS1-206ENST00000559827 L3MBTL2Q969R5 705 aa28.39■■■□□ 2.14
LINS1-206ENST00000559827 KIAA1210Q9ULL0 1709 aa28.39■■■□□ 2.14
LINS1-206ENST00000559827 C14orf93Q9H972 538 aaKnown RBP28.37■■■□□ 2.13
LINS1-206ENST00000559827 XIRP1Q702N8 1843 aaKnown RBP28.36■■■□□ 2.13
LINS1-206ENST00000559827 KDM2AQ9Y2K7 1162 aa28.36■■■□□ 2.13
LINS1-206ENST00000559827 KNDC1Q76NI1 1749 aa28.35■■■□□ 2.13
LINS1-206ENST00000559827 ADGRB1O14514 1584 aa28.35■■■□□ 2.13
LINS1-206ENST00000559827 TONSLQ96HA7 1378 aa28.35■■■□□ 2.13
LINS1-206ENST00000559827 CCER1Q8TC90 406 aaPredicted RBP28.33■■■□□ 2.13
LINS1-206ENST00000559827 PTCH1Q13635 1447 aa28.33■■■□□ 2.13
LINS1-206ENST00000559827 AMOTL2Q9Y2J4 779 aa28.32■■■□□ 2.12
LINS1-206ENST00000559827 TECPR2O15040 1411 aa28.32■■■□□ 2.12
LINS1-206ENST00000559827 CFAP70Q5T0N1 1121 aa28.3■■■□□ 2.12
LINS1-206ENST00000559827 LRPPRCP42704 1394 aaKnown RBP28.29■■■□□ 2.12
LINS1-206ENST00000559827 NCOA3Q9Y6Q9 1424 aa28.28■■■□□ 2.12
LINS1-206ENST00000559827 TRPM1Q7Z4N2 1603 aa28.28■■■□□ 2.12
LINS1-206ENST00000559827 YTHDC2Q9H6S0 1430 aaKnown RBP28.27■■■□□ 2.12
LINS1-206ENST00000559827 TMEM94Q12767 1356 aa28.27■■■□□ 2.12
LINS1-206ENST00000559827 ABCC11Q96J66 1382 aa28.25■■■□□ 2.11
LINS1-206ENST00000559827 TIMELESSQ9UNS1 1208 aa28.25■■■□□ 2.11
LINS1-206ENST00000559827 TMEM132EQ6IEE7 984 aa28.23■■■□□ 2.11
LINS1-206ENST00000559827 PROSER2Q86WR7 435 aaPredicted RBP28.23■■■□□ 2.11
LINS1-206ENST00000559827 ROBO2Q9HCK4 1378 aa28.23■■■□□ 2.11
LINS1-206ENST00000559827 DLC1Q96QB1 1528 aa28.23■■■□□ 2.11
LINS1-206ENST00000559827 FAM135BQ49AJ0 1406 aa28.18■■■□□ 2.1
LINS1-206ENST00000559827 NALCNQ8IZF0 1738 aa28.18■■■□□ 2.1
LINS1-206ENST00000559827 RALGAPBQ86X10 1494 aa28.15■■■□□ 2.1
LINS1-206ENST00000559827 ARHGEF28Q8N1W1 1705 aaKnown RBP28.15■■■□□ 2.1
LINS1-206ENST00000559827 NBPF8Q3BBV2 869 aa28.15■■■□□ 2.1
LINS1-206ENST00000559827 SIRT1Q96EB6 747 aa28.15■■■□□ 2.1
LINS1-206ENST00000559827 ADGRL3Q9HAR2 1447 aa28.15■■■□□ 2.1
LINS1-206ENST00000559827 DCCP43146 1447 aa28.14■■■□□ 2.1
LINS1-206ENST00000559827 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.14■■■□□ 2.1
LINS1-206ENST00000559827 GPRASP1Q5JY77 1395 aa28.13■■■□□ 2.09
LINS1-206ENST00000559827 RBM33Q96EV2 1170 aaKnown RBP28.13■■■□□ 2.09
LINS1-206ENST00000559827 STK26Q9P289 416 aa28.13■■■□□ 2.09
LINS1-206ENST00000559827 MSH6P52701 1360 aa28.12■■■□□ 2.09
LINS1-206ENST00000559827 NBPF1Q3BBV0 1214 aa28.12■■■□□ 2.09
LINS1-206ENST00000559827 ROCK2O75116 1388 aaKnown RBP28.08■■■□□ 2.09
LINS1-206ENST00000559827 PLEKHH1Q9ULM0 1364 aa28.08■■■□□ 2.09
LINS1-206ENST00000559827 CDC42BPGQ6DT37 1551 aa28.07■■■□□ 2.08
LINS1-206ENST00000559827 C19orf44Q9H6X5 657 aa28.07■■■□□ 2.08
LINS1-206ENST00000559827 ADGRB2O60241 1585 aa28.05■■■□□ 2.08
LINS1-206ENST00000559827 TRAK1Q9UPV9 953 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms