RNA–Protein interactions for RNA: ENST00000559343.1

RORA-210, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-210ENST00000559343 CHGAP10645 457 aaKnown RBP18.55■□□□□ 0.56
RORA-210ENST00000559343 SPATA31E1Q6ZUB1 1445 aa18.54■□□□□ 0.56
RORA-210ENST00000559343 RIMS2Q9UQ26 1411 aa18.54■□□□□ 0.56
RORA-210ENST00000559343 NCKAP5LQ9HCH0 1330 aa18.53■□□□□ 0.56
RORA-210ENST00000559343 LTKP29376 864 aa18.53■□□□□ 0.56
RORA-210ENST00000559343 NPHP4O75161 1426 aaPredicted RBP18.52■□□□□ 0.56
RORA-210ENST00000559343 STAC3Q96MF2 364 aa18.52■□□□□ 0.56
RORA-210ENST00000559343 STRCQ7RTU9 1775 aa18.52■□□□□ 0.55
RORA-210ENST00000559343 ZNF326Q5BKZ1 582 aaKnown RBP18.5■□□□□ 0.55
RORA-210ENST00000559343 TIMELESSQ9UNS1 1208 aa18.5■□□□□ 0.55
RORA-210ENST00000559343 PLEKHG1Q9ULL1 1385 aa18.5■□□□□ 0.55
RORA-210ENST00000559343 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
RORA-210ENST00000559343 KIF1BO60333 1816 aa18.48■□□□□ 0.55
RORA-210ENST00000559343 PPP1R15AO75807 674 aaPredicted RBP18.47■□□□□ 0.55
RORA-210ENST00000559343 POLR1AO95602 1720 aaPredicted RBP18.46■□□□□ 0.55
RORA-210ENST00000559343 NEXMIFQ5QGS0 1516 aa18.45■□□□□ 0.54
RORA-210ENST00000559343 TBX22Q9Y458 520 aa18.44■□□□□ 0.54
RORA-210ENST00000559343 RGL3Q3MIN7 710 aa18.42■□□□□ 0.54
RORA-210ENST00000559343 IQGAP1P46940 1657 aa18.41■□□□□ 0.54
RORA-210ENST00000559343 PIK3R4Q99570 1358 aa18.41■□□□□ 0.54
RORA-210ENST00000559343 MYO5BQ9ULV0 1848 aa18.4■□□□□ 0.54
RORA-210ENST00000559343 MYOM2P54296 1465 aa18.39■□□□□ 0.54
RORA-210ENST00000559343 DIP2AQ14689 1571 aa18.39■□□□□ 0.53
RORA-210ENST00000559343 SETBP1Q9Y6X0 1596 aa18.39■□□□□ 0.53
RORA-210ENST00000559343 ADAMTS13Q76LX8 1427 aa18.39■□□□□ 0.53
RORA-210ENST00000559343 SIN3AQ96ST3 1273 aa18.38■□□□□ 0.53
RORA-210ENST00000559343 NRXN1Q9ULB1 1477 aa18.37■□□□□ 0.53
RORA-210ENST00000559343 NUTM2DQ5VT03 806 aaPredicted RBP18.36■□□□□ 0.53
RORA-210ENST00000559343 BCANQ96GW7 911 aa18.36■□□□□ 0.53
RORA-210ENST00000559343 PPLO60437 1756 aa18.35■□□□□ 0.53
RORA-210ENST00000559343 PIK3C2GO75747 1445 aa18.34■□□□□ 0.53
RORA-210ENST00000559343 ADGRF5Q8IZF2 1346 aa18.34■□□□□ 0.53
RORA-210ENST00000559343 KCNA6P17658 529 aa18.34■□□□□ 0.53
RORA-210ENST00000559343 SLC26A8Q96RN1 970 aa18.34■□□□□ 0.53
RORA-210ENST00000559343 DCAF11Q8TEB1 546 aa18.33■□□□□ 0.52
RORA-210ENST00000559343 CPS1P31327 1500 aa18.33■□□□□ 0.52
RORA-210ENST00000559343 ZNF335Q9H4Z2 1342 aaPredicted RBP18.32■□□□□ 0.52
RORA-210ENST00000559343 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
RORA-210ENST00000559343 IFT172Q9UG01 1749 aa18.32■□□□□ 0.52
RORA-210ENST00000559343 C14orf93Q9H972 538 aaKnown RBP18.31■□□□□ 0.52
RORA-210ENST00000559343 LTBP4Q8N2S1 1624 aa18.31■□□□□ 0.52
RORA-210ENST00000559343 NRXN3Q9Y4C0 1643 aa18.3■□□□□ 0.52
RORA-210ENST00000559343 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
RORA-210ENST00000559343 IQSEC2Q5JU85 1478 aa18.29■□□□□ 0.52
RORA-210ENST00000559343 L3MBTL2Q969R5 705 aa18.29■□□□□ 0.52
RORA-210ENST00000559343 PRAG1Q86YV5 1406 aa18.29■□□□□ 0.52
RORA-210ENST00000559343 NKTRP30414 1462 aaKnown RBP18.28■□□□□ 0.52
RORA-210ENST00000559343 ALKQ9UM73 1620 aa18.27■□□□□ 0.52
RORA-210ENST00000559343 NWD1Q149M9 1564 aa18.27■□□□□ 0.52
RORA-210ENST00000559343 NCOA3Q9Y6Q9 1424 aa18.26■□□□□ 0.51
RORA-210ENST00000559343 METP08581 1390 aa18.26■□□□□ 0.51
RORA-210ENST00000559343 KDM2AQ9Y2K7 1162 aa18.25■□□□□ 0.51
RORA-210ENST00000559343 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
RORA-210ENST00000559343 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
RORA-210ENST00000559343 LAMC1P11047 1609 aa18.23■□□□□ 0.51
RORA-210ENST00000559343 SIRT1Q96EB6 747 aa18.23■□□□□ 0.51
RORA-210ENST00000559343 ABCC11Q96J66 1382 aa18.22■□□□□ 0.51
RORA-210ENST00000559343 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
RORA-210ENST00000559343 LRPPRCP42704 1394 aaKnown RBP18.21■□□□□ 0.51
RORA-210ENST00000559343 CFAP70Q5T0N1 1121 aa18.21■□□□□ 0.51
RORA-210ENST00000559343 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
RORA-210ENST00000559343 TECPR2O15040 1411 aa18.21■□□□□ 0.51
RORA-210ENST00000559343 PTCH1Q13635 1447 aa18.21■□□□□ 0.51
RORA-210ENST00000559343 CHD2O14647 1828 aaKnown RBP18.2■□□□□ 0.5
RORA-210ENST00000559343 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
RORA-210ENST00000559343 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
RORA-210ENST00000559343 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
RORA-210ENST00000559343 XRN1Q8IZH2 1706 aaKnown RBP18.18■□□□□ 0.5
RORA-210ENST00000559343 YTHDC2Q9H6S0 1430 aaKnown RBP18.17■□□□□ 0.5
RORA-210ENST00000559343 ADGRB1O14514 1584 aa18.17■□□□□ 0.5
RORA-210ENST00000559343 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
RORA-210ENST00000559343 KIAA1210Q9ULL0 1709 aa18.16■□□□□ 0.5
RORA-210ENST00000559343 FAM135BQ49AJ0 1406 aa18.15■□□□□ 0.5
RORA-210ENST00000559343 STRCP1A6NGW2 1772 aa18.15■□□□□ 0.5
RORA-210ENST00000559343 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
RORA-210ENST00000559343 TMEM132EQ6IEE7 984 aa18.14■□□□□ 0.49
RORA-210ENST00000559343 DLC1Q96QB1 1528 aa18.13■□□□□ 0.49
RORA-210ENST00000559343 C19orf44Q9H6X5 657 aa18.12■□□□□ 0.49
RORA-210ENST00000559343 GPRASP1Q5JY77 1395 aa18.12■□□□□ 0.49
RORA-210ENST00000559343 ROBO2Q9HCK4 1378 aa18.12■□□□□ 0.49
RORA-210ENST00000559343 DCCP43146 1447 aa18.11■□□□□ 0.49
RORA-210ENST00000559343 MSH6P52701 1360 aa18.1■□□□□ 0.49
RORA-210ENST00000559343 NBPF8Q3BBV2 869 aa18.1■□□□□ 0.49
RORA-210ENST00000559343 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
RORA-210ENST00000559343 TOM1O60784 492 aa18.09■□□□□ 0.49
RORA-210ENST00000559343 ADGRL3Q9HAR2 1447 aa18.08■□□□□ 0.49
RORA-210ENST00000559343 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.48
RORA-210ENST00000559343 STK26Q9P289 416 aa18.08■□□□□ 0.48
RORA-210ENST00000559343 RALGAPBQ86X10 1494 aa18.07■□□□□ 0.48
RORA-210ENST00000559343 ROCK2O75116 1388 aaKnown RBP18.07■□□□□ 0.48
RORA-210ENST00000559343 CADPS2Q86UW7 1296 aa18.07■□□□□ 0.48
RORA-210ENST00000559343 FBXO41Q8TF61 875 aa18.06■□□□□ 0.48
RORA-210ENST00000559343 C14orf37Q86TY3 774 aa18.05■□□□□ 0.48
RORA-210ENST00000559343 TRAK1Q9UPV9 953 aa18.05■□□□□ 0.48
RORA-210ENST00000559343 TRPM1Q7Z4N2 1603 aa18.05■□□□□ 0.48
RORA-210ENST00000559343 ATF3P18847 181 aa18.03■□□□□ 0.48
RORA-210ENST00000559343 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
RORA-210ENST00000559343 POGKQ9P215 609 aa18.03■□□□□ 0.48
RORA-210ENST00000559343 EIF3AQ14152 1382 aaKnown RBP18.03■□□□□ 0.48
RORA-210ENST00000559343 UBAP1LF5GYI3 381 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms