RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 SIN3AQ96ST3 1273 aa8.71□□□□□ -1.02
SHC4-206ENST00000559289 IFT172Q9UG01 1749 aa8.71□□□□□ -1.02
SHC4-206ENST00000559289 ARHGAP23Q9P227 1491 aa8.7□□□□□ -1.02
SHC4-206ENST00000559289 PPLO60437 1756 aa8.69□□□□□ -1.02
SHC4-206ENST00000559289 SLIT1O75093 1534 aa8.69□□□□□ -1.02
SHC4-206ENST00000559289 NEXMIFQ5QGS0 1516 aa8.69□□□□□ -1.02
SHC4-206ENST00000559289 CLSPNQ9HAW4 1339 aa8.68□□□□□ -1.02
SHC4-206ENST00000559289 ZFYVE9O95405 1425 aa8.68□□□□□ -1.02
SHC4-206ENST00000559289 STRCQ7RTU9 1775 aa8.68□□□□□ -1.02
SHC4-206ENST00000559289 POLR1AO95602 1720 aaPredicted RBP8.66□□□□□ -1.02
SHC4-206ENST00000559289 TMEM2Q9UHN6 1383 aa8.66□□□□□ -1.02
SHC4-206ENST00000559289 CHGAP10645 457 aaKnown RBP8.66□□□□□ -1.02
SHC4-206ENST00000559289 HSPA2P54652 639 aa8.66□□□□□ -1.02
SHC4-206ENST00000559289 CCER1Q8TC90 406 aaPredicted RBP8.66□□□□□ -1.02
SHC4-206ENST00000559289 RIMS2Q9UQ26 1411 aa8.65□□□□□ -1.02
SHC4-206ENST00000559289 LTKP29376 864 aa8.65□□□□□ -1.02
SHC4-206ENST00000559289 NEUROD1Q13562 356 aa8.65□□□□□ -1.02
SHC4-206ENST00000559289 THEMISQ8N1K5 641 aaPredicted RBP8.65□□□□□ -1.02
SHC4-206ENST00000559289 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.03
SHC4-206ENST00000559289 RGL3Q3MIN7 710 aa8.64□□□□□ -1.03
SHC4-206ENST00000559289 STAG3Q9UJ98 1225 aa8.64□□□□□ -1.03
SHC4-206ENST00000559289 SETD1AO15047 1707 aaKnown RBP8.63□□□□□ -1.03
SHC4-206ENST00000559289 L3MBTL2Q969R5 705 aa8.63□□□□□ -1.03
SHC4-206ENST00000559289 MED14O60244 1454 aa8.63□□□□□ -1.03
SHC4-206ENST00000559289 MYOM2P54296 1465 aa8.63□□□□□ -1.03
SHC4-206ENST00000559289 SCAF11Q99590 1463 aaKnown RBP8.63□□□□□ -1.03
SHC4-206ENST00000559289 NRXN1Q9ULB1 1477 aa8.63□□□□□ -1.03
SHC4-206ENST00000559289 IQGAP1P46940 1657 aa8.62□□□□□ -1.03
SHC4-206ENST00000559289 RPGRIP1LQ68CZ1 1315 aa8.62□□□□□ -1.03
SHC4-206ENST00000559289 NCKAP5LQ9HCH0 1330 aa8.62□□□□□ -1.03
SHC4-206ENST00000559289 ZNF326Q5BKZ1 582 aaKnown RBP8.62□□□□□ -1.03
SHC4-206ENST00000559289 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
SHC4-206ENST00000559289 SETBP1Q9Y6X0 1596 aa8.61□□□□□ -1.03
SHC4-206ENST00000559289 ADGRF5Q8IZF2 1346 aa8.61□□□□□ -1.03
SHC4-206ENST00000559289 TXNDC2Q86VQ3 553 aa8.61□□□□□ -1.03
SHC4-206ENST00000559289 ANKLE2Q86XL3 938 aa8.6□□□□□ -1.03
SHC4-206ENST00000559289 DCAF11Q8TEB1 546 aa8.6□□□□□ -1.03
SHC4-206ENST00000559289 PIK3C2GO75747 1445 aa8.6□□□□□ -1.03
SHC4-206ENST00000559289 ADAMTS13Q76LX8 1427 aa8.6□□□□□ -1.03
SHC4-206ENST00000559289 PLEKHG1Q9ULL1 1385 aa8.6□□□□□ -1.03
SHC4-206ENST00000559289 ALKQ9UM73 1620 aa8.59□□□□□ -1.03
SHC4-206ENST00000559289 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.59□□□□□ -1.03
SHC4-206ENST00000559289 KDM2AQ9Y2K7 1162 aa8.59□□□□□ -1.03
SHC4-206ENST00000559289 NPHP4O75161 1426 aaPredicted RBP8.59□□□□□ -1.03
SHC4-206ENST00000559289 PRAG1Q86YV5 1406 aa8.59□□□□□ -1.03
SHC4-206ENST00000559289 TONSLQ96HA7 1378 aa8.59□□□□□ -1.03
SHC4-206ENST00000559289 ASXL1Q8IXJ9 1541 aa8.59□□□□□ -1.03
SHC4-206ENST00000559289 TRPM1Q7Z4N2 1603 aa8.58□□□□□ -1.04
SHC4-206ENST00000559289 VGFO15240 615 aaPredicted RBP8.58□□□□□ -1.04
SHC4-206ENST00000559289 NBPF8Q3BBV2 869 aa8.58□□□□□ -1.04
SHC4-206ENST00000559289 EID1Q9Y6B2 187 aa8.58□□□□□ -1.04
SHC4-206ENST00000559289 KIAA1210Q9ULL0 1709 aa8.57□□□□□ -1.04
SHC4-206ENST00000559289 DIP2AQ14689 1571 aa8.57□□□□□ -1.04
SHC4-206ENST00000559289 STRCP1A6NGW2 1772 aa8.57□□□□□ -1.04
SHC4-206ENST00000559289 LAMC1P11047 1609 aa8.57□□□□□ -1.04
SHC4-206ENST00000559289 ADGRB1O14514 1584 aa8.56□□□□□ -1.04
SHC4-206ENST00000559289 PPP1R15AO75807 674 aaPredicted RBP8.56□□□□□ -1.04
SHC4-206ENST00000559289 HDGFP51858 240 aaKnown RBP8.56□□□□□ -1.04
SHC4-206ENST00000559289 STAC3Q96MF2 364 aa8.56□□□□□ -1.04
SHC4-206ENST00000559289 TIMELESSQ9UNS1 1208 aa8.56□□□□□ -1.04
SHC4-206ENST00000559289 CHD2O14647 1828 aaKnown RBP8.56□□□□□ -1.04
SHC4-206ENST00000559289 CFAP70Q5T0N1 1121 aa8.55□□□□□ -1.04
SHC4-206ENST00000559289 SLC26A8Q96RN1 970 aa8.55□□□□□ -1.04
SHC4-206ENST00000559289 C14orf93Q9H972 538 aaKnown RBP8.55□□□□□ -1.04
SHC4-206ENST00000559289 METP08581 1390 aa8.55□□□□□ -1.04
SHC4-206ENST00000559289 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
SHC4-206ENST00000559289 XRN1Q8IZH2 1706 aaKnown RBP8.54□□□□□ -1.04
SHC4-206ENST00000559289 NWD1Q149M9 1564 aa8.54□□□□□ -1.04
SHC4-206ENST00000559289 TBX22Q9Y458 520 aa8.54□□□□□ -1.04
SHC4-206ENST00000559289 RALGAPBQ86X10 1494 aa8.53□□□□□ -1.04
SHC4-206ENST00000559289 NBPF1Q3BBV0 1214 aa8.53□□□□□ -1.04
SHC4-206ENST00000559289 KNDC1Q76NI1 1749 aa8.53□□□□□ -1.04
SHC4-206ENST00000559289 GPRASP1Q5JY77 1395 aa8.52□□□□□ -1.05
SHC4-206ENST00000559289 TMEM132EQ6IEE7 984 aa8.52□□□□□ -1.05
SHC4-206ENST00000559289 ARHGEF28Q8N1W1 1705 aaKnown RBP8.51□□□□□ -1.05
SHC4-206ENST00000559289 PIK3R4Q99570 1358 aa8.51□□□□□ -1.05
SHC4-206ENST00000559289 RNF216Q9NWF9 866 aaPredicted RBP8.51□□□□□ -1.05
SHC4-206ENST00000559289 XIRP1Q702N8 1843 aaKnown RBP8.51□□□□□ -1.05
SHC4-206ENST00000559289 LTBP4Q8N2S1 1624 aa8.51□□□□□ -1.05
SHC4-206ENST00000559289 CPS1P31327 1500 aa8.5□□□□□ -1.05
SHC4-206ENST00000559289 TECPR2O15040 1411 aa8.5□□□□□ -1.05
SHC4-206ENST00000559289 BCANQ96GW7 911 aa8.5□□□□□ -1.05
SHC4-206ENST00000559289 YTHDC2Q9H6S0 1430 aaKnown RBP8.5□□□□□ -1.05
SHC4-206ENST00000559289 ZNF335Q9H4Z2 1342 aaPredicted RBP8.5□□□□□ -1.05
SHC4-206ENST00000559289 LRPPRCP42704 1394 aaKnown RBP8.49□□□□□ -1.05
SHC4-206ENST00000559289 DLC1Q96QB1 1528 aa8.49□□□□□ -1.05
SHC4-206ENST00000559289 ROCK2O75116 1388 aaKnown RBP8.48□□□□□ -1.05
SHC4-206ENST00000559289 ABCC11Q96J66 1382 aa8.48□□□□□ -1.05
SHC4-206ENST00000559289 KCNA6P17658 529 aa8.48□□□□□ -1.05
SHC4-206ENST00000559289 AMOTL2Q9Y2J4 779 aa8.48□□□□□ -1.05
SHC4-206ENST00000559289 NKTRP30414 1462 aaKnown RBP8.48□□□□□ -1.05
SHC4-206ENST00000559289 ROBO2Q9HCK4 1378 aa8.48□□□□□ -1.05
SHC4-206ENST00000559289 PTCH1Q13635 1447 aa8.47□□□□□ -1.05
SHC4-206ENST00000559289 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.47□□□□□ -1.05
SHC4-206ENST00000559289 PLEKHH1Q9ULM0 1364 aa8.47□□□□□ -1.05
SHC4-206ENST00000559289 NALCNQ8IZF0 1738 aa8.46□□□□□ -1.05
SHC4-206ENST00000559289 LRRC7Q96NW7 1537 aa8.46□□□□□ -1.05
SHC4-206ENST00000559289 STK26Q9P289 416 aa8.46□□□□□ -1.06
SHC4-206ENST00000559289 TRAK1Q9UPV9 953 aa8.46□□□□□ -1.06
SHC4-206ENST00000559289 QRICH2Q9H0J4 1663 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms