RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ABCA6Q8N139 1617 aa15.27■□□□□ 0.04
CLPX-204ENST00000559152 MAP3K4Q9Y6R4 1608 aa15.27■□□□□ 0.04
CLPX-204ENST00000559152 GGT6Q6P531 493 aa15.27■□□□□ 0.04
CLPX-204ENST00000559152 NLRP13Q86W25 1043 aa15.27■□□□□ 0.04
CLPX-204ENST00000559152 CNGB1Q14028 1251 aaPredicted RBP15.27■□□□□ 0.03
CLPX-204ENST00000559152 NPATQ14207 1427 aa15.25■□□□□ 0.03
CLPX-204ENST00000559152 RPGRIP1LQ68CZ1 1315 aa15.25■□□□□ 0.03
CLPX-204ENST00000559152 RAPGEF3O95398 923 aa15.25■□□□□ 0.03
CLPX-204ENST00000559152 PANK3Q9H999 370 aa15.25■□□□□ 0.03
CLPX-204ENST00000559152 ABCC3O15438 1527 aa15.24■□□□□ 0.03
CLPX-204ENST00000559152 NRXN1Q9ULB1 1477 aa15.24■□□□□ 0.03
CLPX-204ENST00000559152 ADGRB3O60242 1522 aa15.24■□□□□ 0.03
CLPX-204ENST00000559152 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
CLPX-204ENST00000559152 UGGT1Q9NYU2 1555 aa15.24■□□□□ 0.03
CLPX-204ENST00000559152 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
CLPX-204ENST00000559152 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
CLPX-204ENST00000559152 IFT172Q9UG01 1749 aa15.22■□□□□ 0.03
CLPX-204ENST00000559152 ARHGAP31Q2M1Z3 1444 aa15.22■□□□□ 0.03
CLPX-204ENST00000559152 BCANQ96GW7 911 aa15.21■□□□□ 0.03
CLPX-204ENST00000559152 RICTORQ6R327 1708 aa15.21■□□□□ 0.03
CLPX-204ENST00000559152 SMG6Q86US8 1419 aaKnown RBP15.21■□□□□ 0.03
CLPX-204ENST00000559152 ADGRF5Q8IZF2 1346 aa15.21■□□□□ 0.03
CLPX-204ENST00000559152 INSRP06213 1382 aa15.21■□□□□ 0.03
CLPX-204ENST00000559152 SYNMO15061 1565 aa15.2■□□□□ 0.02
CLPX-204ENST00000559152 NOS1P29475 1434 aa15.2■□□□□ 0.02
CLPX-204ENST00000559152 CFAP70Q5T0N1 1121 aa15.2■□□□□ 0.02
CLPX-204ENST00000559152 ZC3H13Q5T200 1668 aaKnown RBP15.2■□□□□ 0.02
CLPX-204ENST00000559152 CAMSAP1Q5T5Y3 1602 aa15.19■□□□□ 0.02
CLPX-204ENST00000559152 SETBP1Q9Y6X0 1596 aa15.19■□□□□ 0.02
CLPX-204ENST00000559152 CHGAP10645 457 aaKnown RBP15.19■□□□□ 0.02
CLPX-204ENST00000559152 KNSTRNQ9Y448 316 aa15.19■□□□□ 0.02
CLPX-204ENST00000559152 ZMYM4Q5VZL5 1548 aa15.18■□□□□ 0.02
CLPX-204ENST00000559152 SBNO2Q9Y2G9 1366 aa15.18■□□□□ 0.02
CLPX-204ENST00000559152 MROH2AA6NES4 1674 aa15.18■□□□□ 0.02
CLPX-204ENST00000559152 NUDCQ9Y266 331 aa15.17■□□□□ 0.02
CLPX-204ENST00000559152 CC2D1BQ5T0F9 858 aaKnown RBP15.17■□□□□ 0.02
CLPX-204ENST00000559152 C14orf93Q9H972 538 aaKnown RBP15.16■□□□□ 0.02
CLPX-204ENST00000559152 PIK3C2GO75747 1445 aa15.16■□□□□ 0.02
CLPX-204ENST00000559152 SLC52A1Q9NWF4 448 aa15.16■□□□□ 0.02
CLPX-204ENST00000559152 NPC1L1Q9UHC9 1359 aa15.15■□□□□ 0.02
CLPX-204ENST00000559152 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
CLPX-204ENST00000559152 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
CLPX-204ENST00000559152 KDM5AP29375 1690 aaKnown RBP15.14■□□□□ 0.01
CLPX-204ENST00000559152 PIK3C2BO00750 1634 aa15.14■□□□□ 0.01
CLPX-204ENST00000559152 PPLO60437 1756 aa15.14■□□□□ 0.01
CLPX-204ENST00000559152 MYO3AQ8NEV4 1616 aa15.13■□□□□ 0.01
CLPX-204ENST00000559152 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
CLPX-204ENST00000559152 PDE3BQ13370 1112 aa15.13■□□□□ 0.01
CLPX-204ENST00000559152 ASXL1Q8IXJ9 1541 aa15.12■□□□□ 0.01
CLPX-204ENST00000559152 CENPJQ9HC77 1338 aaPredicted RBP15.12■□□□□ 0.01
CLPX-204ENST00000559152 PPP4R2Q9NY27 417 aa15.12■□□□□ 0.01
CLPX-204ENST00000559152 ERVK-7P63135 1459 aa15.11■□□□□ 0.01
CLPX-204ENST00000559152 AMER1Q5JTC6 1135 aaPredicted RBP15.11■□□□□ 0.01
CLPX-204ENST00000559152 ZFYVE9O95405 1425 aa15.1■□□□□ 0.01
CLPX-204ENST00000559152 REREQ9P2R6 1566 aa15.1■□□□□ 0.01
CLPX-204ENST00000559152 SIGLEC1Q9BZZ2 1709 aa15.08■□□□□ 0.01
CLPX-204ENST00000559152 ADGRB1O14514 1584 aa15.08■□□□□ 0
CLPX-204ENST00000559152 AGLP35573 1532 aa15.08■□□□□ 0
CLPX-204ENST00000559152 PPP2R1AP30153 589 aa15.08■□□□□ 0
CLPX-204ENST00000559152 PUS7Q96PZ0 661 aaKnown RBP15.08■□□□□ 0
CLPX-204ENST00000559152 RNF123Q5XPI4 1314 aa15.08■□□□□ 0
CLPX-204ENST00000559152 MYOM1P52179 1685 aa15.07■□□□□ 0
CLPX-204ENST00000559152 BLMP54132 1417 aaPredicted RBP15.07■□□□□ 0
CLPX-204ENST00000559152 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
CLPX-204ENST00000559152 IDI1Q13907 227 aa15.07■□□□□ 0
CLPX-204ENST00000559152 TSHZ2Q9NRE2 1034 aa15.07■□□□□ 0
CLPX-204ENST00000559152 NEXMIFQ5QGS0 1516 aa15.07■□□□□ 0
CLPX-204ENST00000559152 TRAK1Q9UPV9 953 aa15.05■□□□□ 0
CLPX-204ENST00000559152 CFAP65Q6ZU64 1925 aaKnown RBP15.05■□□□□ 0
CLPX-204ENST00000559152 WDR43Q15061 677 aaKnown RBP eCLIP15.04■□□□□ -0
CLPX-204ENST00000559152 PREX1Q8TCU6 1659 aa15.03■□□□□ -0
CLPX-204ENST00000559152 TMEM132EQ6IEE7 984 aa15.01□□□□□ -0.01
CLPX-204ENST00000559152 EVC2Q86UK5 1308 aa15.01□□□□□ -0.01
CLPX-204ENST00000559152 QRICH2Q9H0J4 1663 aa15.01□□□□□ -0.01
CLPX-204ENST00000559152 TMEM131LA2VDJ0 1609 aa15□□□□□ -0.01
CLPX-204ENST00000559152 ADAMTS8Q9UP79 889 aa14.99□□□□□ -0.01
CLPX-204ENST00000559152 CARD14Q9BXL6 1004 aa14.98□□□□□ -0.01
CLPX-204ENST00000559152 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
CLPX-204ENST00000559152 RCAN3Q9UKA8 241 aa14.97□□□□□ -0.01
CLPX-204ENST00000559152 NINLQ9Y2I6 1382 aa14.96□□□□□ -0.01
CLPX-204ENST00000559152 NUTM2DQ5VT03 806 aaPredicted RBP14.96□□□□□ -0.01
CLPX-204ENST00000559152 NGEFQ8N5V2 710 aa14.96□□□□□ -0.02
CLPX-204ENST00000559152 FBXO31Q5XUX0 539 aaPredicted RBP14.95□□□□□ -0.02
CLPX-204ENST00000559152 SALL2Q9Y467 1007 aaPredicted RBP14.95□□□□□ -0.02
CLPX-204ENST00000559152 ARHGEF28Q8N1W1 1705 aaKnown RBP14.95□□□□□ -0.02
CLPX-204ENST00000559152 NSD3Q9BZ95 1437 aa14.94□□□□□ -0.02
CLPX-204ENST00000559152 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
CLPX-204ENST00000559152 ARHGEF40Q8TER5 1519 aa14.94□□□□□ -0.02
CLPX-204ENST00000559152 RRP1P56182 461 aaKnown RBP14.93□□□□□ -0.02
CLPX-204ENST00000559152 SLC12A5Q9H2X9 1139 aa14.93□□□□□ -0.02
CLPX-204ENST00000559152 SPATA31D1Q6ZQQ2 1576 aa14.93□□□□□ -0.02
CLPX-204ENST00000559152 CGNL1Q0VF96 1302 aa14.93□□□□□ -0.02
CLPX-204ENST00000559152 USP32Q8NFA0 1604 aa14.93□□□□□ -0.02
CLPX-204ENST00000559152 POLR3AO14802 1390 aaPredicted RBP14.93□□□□□ -0.02
CLPX-204ENST00000559152 NSD2O96028 1365 aa14.93□□□□□ -0.02
CLPX-204ENST00000559152 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
CLPX-204ENST00000559152 ANKRD36BQ8N2N9 1353 aa14.93□□□□□ -0.02
CLPX-204ENST00000559152 B4GALNT3Q6L9W6 998 aa14.92□□□□□ -0.02
CLPX-204ENST00000559152 MORC1Q86VD1 984 aa14.92□□□□□ -0.02
CLPX-204ENST00000559152 CLTCQ00610 1675 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms