RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CHGAP10645 457 aaKnown RBP16.06■□□□□ 0.16
TPM1-217ENST00000559108 MED14O60244 1454 aa16.05■□□□□ 0.16
TPM1-217ENST00000559108 THEMISQ8N1K5 641 aaPredicted RBP16.05■□□□□ 0.16
TPM1-217ENST00000559108 NUTM2DQ5VT03 806 aaPredicted RBP16.04■□□□□ 0.16
TPM1-217ENST00000559108 SETD1AO15047 1707 aaKnown RBP16.04■□□□□ 0.16
TPM1-217ENST00000559108 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
TPM1-217ENST00000559108 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
TPM1-217ENST00000559108 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
TPM1-217ENST00000559108 SENP3Q9H4L4 574 aaPredicted RBP16.02■□□□□ 0.16
TPM1-217ENST00000559108 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.15
TPM1-217ENST00000559108 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
TPM1-217ENST00000559108 RGL3Q3MIN7 710 aa15.99■□□□□ 0.15
TPM1-217ENST00000559108 ADAMTS13Q76LX8 1427 aa15.99■□□□□ 0.15
TPM1-217ENST00000559108 SETBP1Q9Y6X0 1596 aa15.99■□□□□ 0.15
TPM1-217ENST00000559108 ANKLE2Q86XL3 938 aa15.98■□□□□ 0.15
TPM1-217ENST00000559108 ZNF326Q5BKZ1 582 aaKnown RBP15.97■□□□□ 0.15
TPM1-217ENST00000559108 PLEKHG1Q9ULL1 1385 aa15.97■□□□□ 0.15
TPM1-217ENST00000559108 NRXN1Q9ULB1 1477 aa15.97■□□□□ 0.15
TPM1-217ENST00000559108 ASXL1Q8IXJ9 1541 aa15.96■□□□□ 0.15
TPM1-217ENST00000559108 MYOM2P54296 1465 aa15.96■□□□□ 0.14
TPM1-217ENST00000559108 ADGRF5Q8IZF2 1346 aa15.95■□□□□ 0.14
TPM1-217ENST00000559108 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
TPM1-217ENST00000559108 CHD2O14647 1828 aaKnown RBP15.94■□□□□ 0.14
TPM1-217ENST00000559108 ALKQ9UM73 1620 aa15.93■□□□□ 0.14
TPM1-217ENST00000559108 PIK3C2GO75747 1445 aa15.93■□□□□ 0.14
TPM1-217ENST00000559108 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
TPM1-217ENST00000559108 SLC26A8Q96RN1 970 aa15.92■□□□□ 0.14
TPM1-217ENST00000559108 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
TPM1-217ENST00000559108 RPGRIP1LQ68CZ1 1315 aa15.92■□□□□ 0.14
TPM1-217ENST00000559108 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
TPM1-217ENST00000559108 XIRP1Q702N8 1843 aaKnown RBP15.91■□□□□ 0.14
TPM1-217ENST00000559108 DIP2AQ14689 1571 aa15.91■□□□□ 0.14
TPM1-217ENST00000559108 ZNF335Q9H4Z2 1342 aaPredicted RBP15.91■□□□□ 0.14
TPM1-217ENST00000559108 XRN1Q8IZH2 1706 aaKnown RBP15.91■□□□□ 0.14
TPM1-217ENST00000559108 PPP1R15AO75807 674 aaPredicted RBP15.9■□□□□ 0.14
TPM1-217ENST00000559108 PTPRUQ92729 1446 aa15.9■□□□□ 0.14
TPM1-217ENST00000559108 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
TPM1-217ENST00000559108 L3MBTL2Q969R5 705 aa15.89■□□□□ 0.13
TPM1-217ENST00000559108 METP08581 1390 aa15.88■□□□□ 0.13
TPM1-217ENST00000559108 DCAF11Q8TEB1 546 aa15.87■□□□□ 0.13
TPM1-217ENST00000559108 ADGRB1O14514 1584 aa15.87■□□□□ 0.13
TPM1-217ENST00000559108 LAMC1P11047 1609 aa15.86■□□□□ 0.13
TPM1-217ENST00000559108 TRPM1Q7Z4N2 1603 aa15.86■□□□□ 0.13
TPM1-217ENST00000559108 PRAG1Q86YV5 1406 aa15.85■□□□□ 0.13
TPM1-217ENST00000559108 CCER1Q8TC90 406 aaPredicted RBP15.85■□□□□ 0.13
TPM1-217ENST00000559108 KDM2AQ9Y2K7 1162 aa15.85■□□□□ 0.13
TPM1-217ENST00000559108 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
TPM1-217ENST00000559108 VGFO15240 615 aaPredicted RBP15.84■□□□□ 0.13
TPM1-217ENST00000559108 KIAA1210Q9ULL0 1709 aa15.84■□□□□ 0.13
TPM1-217ENST00000559108 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.12
TPM1-217ENST00000559108 TBX22Q9Y458 520 aa15.83■□□□□ 0.12
TPM1-217ENST00000559108 KNDC1Q76NI1 1749 aa15.82■□□□□ 0.12
TPM1-217ENST00000559108 CFAP70Q5T0N1 1121 aa15.82■□□□□ 0.12
TPM1-217ENST00000559108 BCANQ96GW7 911 aa15.82■□□□□ 0.12
TPM1-217ENST00000559108 LRRC7Q96NW7 1537 aa15.82■□□□□ 0.12
TPM1-217ENST00000559108 NBPF8Q3BBV2 869 aa15.81■□□□□ 0.12
TPM1-217ENST00000559108 CLSPNQ9HAW4 1339 aa15.81■□□□□ 0.12
TPM1-217ENST00000559108 C14orf93Q9H972 538 aaKnown RBP15.8■□□□□ 0.12
TPM1-217ENST00000559108 CPS1P31327 1500 aa15.79■□□□□ 0.12
TPM1-217ENST00000559108 TONSLQ96HA7 1378 aa15.79■□□□□ 0.12
TPM1-217ENST00000559108 TMEM132EQ6IEE7 984 aa15.79■□□□□ 0.12
TPM1-217ENST00000559108 NKTRP30414 1462 aaKnown RBP15.78■□□□□ 0.12
TPM1-217ENST00000559108 NALCNQ8IZF0 1738 aa15.78■□□□□ 0.12
TPM1-217ENST00000559108 ARHGEF28Q8N1W1 1705 aaKnown RBP15.78■□□□□ 0.12
TPM1-217ENST00000559108 RBM33Q96EV2 1170 aaKnown RBP15.78■□□□□ 0.12
TPM1-217ENST00000559108 PIK3R4Q99570 1358 aa15.77■□□□□ 0.12
TPM1-217ENST00000559108 KCNA6P17658 529 aa15.77■□□□□ 0.12
TPM1-217ENST00000559108 ROBO2Q9HCK4 1378 aa15.76■□□□□ 0.11
TPM1-217ENST00000559108 NBPF1Q3BBV0 1214 aa15.76■□□□□ 0.11
TPM1-217ENST00000559108 TECPR2O15040 1411 aa15.76■□□□□ 0.11
TPM1-217ENST00000559108 YTHDC2Q9H6S0 1430 aaKnown RBP15.76■□□□□ 0.11
TPM1-217ENST00000559108 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.75■□□□□ 0.11
TPM1-217ENST00000559108 AMOTL2Q9Y2J4 779 aa15.75■□□□□ 0.11
TPM1-217ENST00000559108 LRPPRCP42704 1394 aaKnown RBP15.74■□□□□ 0.11
TPM1-217ENST00000559108 PLEKHH1Q9ULM0 1364 aa15.74■□□□□ 0.11
TPM1-217ENST00000559108 RALGAPBQ86X10 1494 aa15.73■□□□□ 0.11
TPM1-217ENST00000559108 PTCH1Q13635 1447 aa15.73■□□□□ 0.11
TPM1-217ENST00000559108 TMEM94Q12767 1356 aa15.73■□□□□ 0.11
TPM1-217ENST00000559108 STAC3Q96MF2 364 aa15.71■□□□□ 0.11
TPM1-217ENST00000559108 DLC1Q96QB1 1528 aa15.71■□□□□ 0.11
TPM1-217ENST00000559108 STK26Q9P289 416 aa15.7■□□□□ 0.1
TPM1-217ENST00000559108 ABCC11Q96J66 1382 aa15.7■□□□□ 0.1
TPM1-217ENST00000559108 CERKQ8TCT0 537 aa15.69■□□□□ 0.1
TPM1-217ENST00000559108 GPRASP1Q5JY77 1395 aa15.68■□□□□ 0.1
TPM1-217ENST00000559108 IQSEC2Q5JU85 1478 aa15.67■□□□□ 0.1
TPM1-217ENST00000559108 WAPLQ7Z5K2 1190 aa15.67■□□□□ 0.1
TPM1-217ENST00000559108 PROSER2Q86WR7 435 aaPredicted RBP15.67■□□□□ 0.1
TPM1-217ENST00000559108 QRICH2Q9H0J4 1663 aa15.67■□□□□ 0.1
TPM1-217ENST00000559108 TRAK1Q9UPV9 953 aa15.65■□□□□ 0.1
TPM1-217ENST00000559108 FAM135BQ49AJ0 1406 aa15.65■□□□□ 0.1
TPM1-217ENST00000559108 ADGRL3Q9HAR2 1447 aa15.65■□□□□ 0.1
TPM1-217ENST00000559108 ROCK2O75116 1388 aaKnown RBP15.64■□□□□ 0.09
TPM1-217ENST00000559108 TIMELESSQ9UNS1 1208 aa15.64■□□□□ 0.09
TPM1-217ENST00000559108 FMN2Q9NZ56 1722 aa15.63■□□□□ 0.09
TPM1-217ENST00000559108 ADGRB2O60241 1585 aa15.63■□□□□ 0.09
TPM1-217ENST00000559108 RGPD8O14715 1765 aaPredicted RBP15.63■□□□□ 0.09
TPM1-217ENST00000559108 USP32Q8NFA0 1604 aa15.63■□□□□ 0.09
TPM1-217ENST00000559108 CDC42BPGQ6DT37 1551 aa15.62■□□□□ 0.09
TPM1-217ENST00000559108 PRAM1Q96QH2 718 aa15.62■□□□□ 0.09
TPM1-217ENST00000559108 NCOA3Q9Y6Q9 1424 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms