RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 LTKP29376 864 aa22.63■■□□□ 1.21
CDC42BPB-204ENST00000559043 TIMELESSQ9UNS1 1208 aa22.63■■□□□ 1.21
CDC42BPB-204ENST00000559043 NEXMIFQ5QGS0 1516 aa22.63■■□□□ 1.21
CDC42BPB-204ENST00000559043 LMTK3Q96Q04 1460 aa22.63■■□□□ 1.21
CDC42BPB-204ENST00000559043 HSPA2P54652 639 aa22.63■■□□□ 1.21
CDC42BPB-204ENST00000559043 ZFYVE9O95405 1425 aa22.63■■□□□ 1.21
CDC42BPB-204ENST00000559043 RPGRIP1LQ68CZ1 1315 aa22.62■■□□□ 1.21
CDC42BPB-204ENST00000559043 ADGRF5Q8IZF2 1346 aa22.62■■□□□ 1.21
CDC42BPB-204ENST00000559043 PPP1R15AO75807 674 aaPredicted RBP22.61■■□□□ 1.21
CDC42BPB-204ENST00000559043 RIMS2Q9UQ26 1411 aa22.61■■□□□ 1.21
CDC42BPB-204ENST00000559043 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
CDC42BPB-204ENST00000559043 ARHGAP23Q9P227 1491 aa22.6■■□□□ 1.21
CDC42BPB-204ENST00000559043 IFT172Q9UG01 1749 aa22.6■■□□□ 1.21
CDC42BPB-204ENST00000559043 PPLO60437 1756 aa22.6■■□□□ 1.21
CDC42BPB-204ENST00000559043 NBPF8Q3BBV2 869 aa22.59■■□□□ 1.21
CDC42BPB-204ENST00000559043 SLIT1O75093 1534 aa22.59■■□□□ 1.21
CDC42BPB-204ENST00000559043 TXNDC2Q86VQ3 553 aa22.58■■□□□ 1.21
CDC42BPB-204ENST00000559043 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
CDC42BPB-204ENST00000559043 MYOM2P54296 1465 aa22.53■■□□□ 1.2
CDC42BPB-204ENST00000559043 NCKAP5LQ9HCH0 1330 aa22.53■■□□□ 1.2
CDC42BPB-204ENST00000559043 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.52■■□□□ 1.2
CDC42BPB-204ENST00000559043 NRXN1Q9ULB1 1477 aa22.52■■□□□ 1.2
CDC42BPB-204ENST00000559043 ANKLE2Q86XL3 938 aa22.52■■□□□ 1.2
CDC42BPB-204ENST00000559043 MIER1Q8N108 512 aa22.52■■□□□ 1.2
CDC42BPB-204ENST00000559043 STAC3Q96MF2 364 aa22.52■■□□□ 1.2
CDC42BPB-204ENST00000559043 EID1Q9Y6B2 187 aa22.52■■□□□ 1.2
CDC42BPB-204ENST00000559043 PRAG1Q86YV5 1406 aa22.52■■□□□ 1.19
CDC42BPB-204ENST00000559043 HDGFP51858 240 aaKnown RBP22.5■■□□□ 1.19
CDC42BPB-204ENST00000559043 SCAF11Q99590 1463 aaKnown RBP22.5■■□□□ 1.19
CDC42BPB-204ENST00000559043 PIK3C2GO75747 1445 aa22.49■■□□□ 1.19
CDC42BPB-204ENST00000559043 CFAP70Q5T0N1 1121 aa22.49■■□□□ 1.19
CDC42BPB-204ENST00000559043 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
CDC42BPB-204ENST00000559043 SCAF1Q9H7N4 1312 aaKnown RBP22.48■■□□□ 1.19
CDC42BPB-204ENST00000559043 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
CDC42BPB-204ENST00000559043 NBPF1Q3BBV0 1214 aa22.47■■□□□ 1.19
CDC42BPB-204ENST00000559043 PLEKHG1Q9ULL1 1385 aa22.46■■□□□ 1.19
CDC42BPB-204ENST00000559043 C14orf93Q9H972 538 aaKnown RBP22.45■■□□□ 1.18
CDC42BPB-204ENST00000559043 NRXN3Q9Y4C0 1643 aa22.45■■□□□ 1.18
CDC42BPB-204ENST00000559043 SLC26A8Q96RN1 970 aa22.44■■□□□ 1.18
CDC42BPB-204ENST00000559043 STRCQ7RTU9 1775 aa22.44■■□□□ 1.18
CDC42BPB-204ENST00000559043 ADAMTS13Q76LX8 1427 aa22.43■■□□□ 1.18
CDC42BPB-204ENST00000559043 BCANQ96GW7 911 aa22.42■■□□□ 1.18
CDC42BPB-204ENST00000559043 MED14O60244 1454 aa22.42■■□□□ 1.18
CDC42BPB-204ENST00000559043 TMEM132EQ6IEE7 984 aa22.41■■□□□ 1.18
CDC42BPB-204ENST00000559043 SETBP1Q9Y6X0 1596 aa22.41■■□□□ 1.18
CDC42BPB-204ENST00000559043 ALKQ9UM73 1620 aa22.41■■□□□ 1.18
CDC42BPB-204ENST00000559043 IQGAP1P46940 1657 aa22.4■■□□□ 1.18
CDC42BPB-204ENST00000559043 POLR1AO95602 1720 aaPredicted RBP22.4■■□□□ 1.18
CDC42BPB-204ENST00000559043 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
CDC42BPB-204ENST00000559043 TRPM1Q7Z4N2 1603 aa22.39■■□□□ 1.18
CDC42BPB-204ENST00000559043 METP08581 1390 aa22.38■■□□□ 1.17
CDC42BPB-204ENST00000559043 SETD1AO15047 1707 aaKnown RBP22.36■■□□□ 1.17
CDC42BPB-204ENST00000559043 TBX22Q9Y458 520 aa22.36■■□□□ 1.17
CDC42BPB-204ENST00000559043 RALGAPBQ86X10 1494 aa22.36■■□□□ 1.17
CDC42BPB-204ENST00000559043 ASXL1Q8IXJ9 1541 aa22.36■■□□□ 1.17
CDC42BPB-204ENST00000559043 ADGRB1O14514 1584 aa22.34■■□□□ 1.17
CDC42BPB-204ENST00000559043 KIAA1210Q9ULL0 1709 aa22.34■■□□□ 1.17
CDC42BPB-204ENST00000559043 ROCK2O75116 1388 aaKnown RBP22.33■■□□□ 1.17
CDC42BPB-204ENST00000559043 GPRASP1Q5JY77 1395 aa22.32■■□□□ 1.16
CDC42BPB-204ENST00000559043 CARD11Q9BXL7 1154 aa22.3■■□□□ 1.16
CDC42BPB-204ENST00000559043 PTPRUQ92729 1446 aa22.3■■□□□ 1.16
CDC42BPB-204ENST00000559043 LAMC1P11047 1609 aa22.3■■□□□ 1.16
CDC42BPB-204ENST00000559043 STK26Q9P289 416 aa22.29■■□□□ 1.16
CDC42BPB-204ENST00000559043 TRAK1Q9UPV9 953 aa22.27■■□□□ 1.15
CDC42BPB-204ENST00000559043 YTHDC2Q9H6S0 1430 aaKnown RBP22.26■■□□□ 1.15
CDC42BPB-204ENST00000559043 DIP2AQ14689 1571 aa22.26■■□□□ 1.15
CDC42BPB-204ENST00000559043 AMOTL2Q9Y2J4 779 aa22.25■■□□□ 1.15
CDC42BPB-204ENST00000559043 LRPPRCP42704 1394 aaKnown RBP22.24■■□□□ 1.15
CDC42BPB-204ENST00000559043 ABCC11Q96J66 1382 aa22.22■■□□□ 1.15
CDC42BPB-204ENST00000559043 KCNA6P17658 529 aa22.22■■□□□ 1.15
CDC42BPB-204ENST00000559043 YTHDC1Q96MU7 727 aaKnown RBP22.22■■□□□ 1.15
CDC42BPB-204ENST00000559043 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
CDC42BPB-204ENST00000559043 PIK3R4Q99570 1358 aa22.21■■□□□ 1.15
CDC42BPB-204ENST00000559043 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
CDC42BPB-204ENST00000559043 CHD2O14647 1828 aaKnown RBP22.21■■□□□ 1.15
CDC42BPB-204ENST00000559043 USP47Q96K76 1375 aa22.2■■□□□ 1.14
CDC42BPB-204ENST00000559043 WAPLQ7Z5K2 1190 aa22.19■■□□□ 1.14
CDC42BPB-204ENST00000559043 ROBO2Q9HCK4 1378 aa22.19■■□□□ 1.14
CDC42BPB-204ENST00000559043 HSPA5P11021 654 aaKnown RBP22.19■■□□□ 1.14
CDC42BPB-204ENST00000559043 ZNF335Q9H4Z2 1342 aaPredicted RBP22.18■■□□□ 1.14
CDC42BPB-204ENST00000559043 ST20-MTHFSA0A0A6YYL1 179 aa22.18■■□□□ 1.14
CDC42BPB-204ENST00000559043 STRCP1A6NGW2 1772 aa22.18■■□□□ 1.14
CDC42BPB-204ENST00000559043 PLEKHH1Q9ULM0 1364 aa22.17■■□□□ 1.14
CDC42BPB-204ENST00000559043 TECPR2O15040 1411 aa22.17■■□□□ 1.14
CDC42BPB-204ENST00000559043 XRN1Q8IZH2 1706 aaKnown RBP22.16■■□□□ 1.14
CDC42BPB-204ENST00000559043 EIF4G2P78344 907 aaKnown RBP eCLIP22.16■■□□□ 1.14
CDC42BPB-204ENST00000559043 PRAM1Q96QH2 718 aa22.16■■□□□ 1.14
CDC42BPB-204ENST00000559043 RBM33Q96EV2 1170 aaKnown RBP22.16■■□□□ 1.14
CDC42BPB-204ENST00000559043 SAFB2Q14151 953 aaKnown RBP eCLIP22.15■■□□□ 1.14
CDC42BPB-204ENST00000559043 GTF3C3Q9Y5Q9 886 aa22.15■■□□□ 1.14
CDC42BPB-204ENST00000559043 ARHGEF28Q8N1W1 1705 aaKnown RBP22.15■■□□□ 1.14
CDC42BPB-204ENST00000559043 SIRT1Q96EB6 747 aa22.14■■□□□ 1.13
CDC42BPB-204ENST00000559043 DLC1Q96QB1 1528 aa22.12■■□□□ 1.13
CDC42BPB-204ENST00000559043 NWD1Q149M9 1564 aa22.12■■□□□ 1.13
CDC42BPB-204ENST00000559043 KNDC1Q76NI1 1749 aa22.12■■□□□ 1.13
CDC42BPB-204ENST00000559043 CPS1P31327 1500 aa22.12■■□□□ 1.13
CDC42BPB-204ENST00000559043 TESK2Q96S53 571 aa22.12■■□□□ 1.13
CDC42BPB-204ENST00000559043 POGKQ9P215 609 aa22.1■■□□□ 1.13
CDC42BPB-204ENST00000559043 CENPJQ9HC77 1338 aaPredicted RBP22.1■■□□□ 1.13
CDC42BPB-204ENST00000559043 FAM135BQ49AJ0 1406 aa22.1■■□□□ 1.13
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