RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 HSPA2P54652 639 aa9.49□□□□□ -0.89
CHRNA3-204ENST00000559002 DCAF11Q8TEB1 546 aa9.49□□□□□ -0.89
CHRNA3-204ENST00000559002 L3MBTL2Q969R5 705 aa9.49□□□□□ -0.89
CHRNA3-204ENST00000559002 TIMELESSQ9UNS1 1208 aa9.49□□□□□ -0.89
CHRNA3-204ENST00000559002 SLIT1O75093 1534 aa9.49□□□□□ -0.89
CHRNA3-204ENST00000559002 ARHGAP23Q9P227 1491 aa9.48□□□□□ -0.89
CHRNA3-204ENST00000559002 NEXMIFQ5QGS0 1516 aa9.48□□□□□ -0.89
CHRNA3-204ENST00000559002 VGFO15240 615 aaPredicted RBP9.48□□□□□ -0.89
CHRNA3-204ENST00000559002 NUTM2DQ5VT03 806 aaPredicted RBP9.48□□□□□ -0.89
CHRNA3-204ENST00000559002 TXNDC2Q86VQ3 553 aa9.48□□□□□ -0.89
CHRNA3-204ENST00000559002 ANKLE2Q86XL3 938 aa9.48□□□□□ -0.89
CHRNA3-204ENST00000559002 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
CHRNA3-204ENST00000559002 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
CHRNA3-204ENST00000559002 SCAF11Q99590 1463 aaKnown RBP9.47□□□□□ -0.89
CHRNA3-204ENST00000559002 BCANQ96GW7 911 aa9.47□□□□□ -0.89
CHRNA3-204ENST00000559002 STAC3Q96MF2 364 aa9.47□□□□□ -0.89
CHRNA3-204ENST00000559002 MYO5BQ9ULV0 1848 aa9.47□□□□□ -0.89
CHRNA3-204ENST00000559002 MYOM2P54296 1465 aa9.47□□□□□ -0.89
CHRNA3-204ENST00000559002 LTKP29376 864 aa9.46□□□□□ -0.9
CHRNA3-204ENST00000559002 SENP3Q9H4L4 574 aaPredicted RBP9.45□□□□□ -0.9
CHRNA3-204ENST00000559002 NCKAP5LQ9HCH0 1330 aa9.45□□□□□ -0.9
CHRNA3-204ENST00000559002 PLEKHG1Q9ULL1 1385 aa9.45□□□□□ -0.9
CHRNA3-204ENST00000559002 PPLO60437 1756 aa9.45□□□□□ -0.9
CHRNA3-204ENST00000559002 ZEB1P37275 1124 aaPredicted RBP9.44□□□□□ -0.9
CHRNA3-204ENST00000559002 ADGRF5Q8IZF2 1346 aa9.44□□□□□ -0.9
CHRNA3-204ENST00000559002 IFT172Q9UG01 1749 aa9.43□□□□□ -0.9
CHRNA3-204ENST00000559002 NPHP4O75161 1426 aaPredicted RBP9.43□□□□□ -0.9
CHRNA3-204ENST00000559002 PRAG1Q86YV5 1406 aa9.43□□□□□ -0.9
CHRNA3-204ENST00000559002 NRXN1Q9ULB1 1477 aa9.42□□□□□ -0.9
CHRNA3-204ENST00000559002 PIK3C2GO75747 1445 aa9.42□□□□□ -0.9
CHRNA3-204ENST00000559002 POLR1AO95602 1720 aaPredicted RBP9.42□□□□□ -0.9
CHRNA3-204ENST00000559002 MED14O60244 1454 aa9.41□□□□□ -0.9
CHRNA3-204ENST00000559002 DMRT2Q9Y5R5 561 aa9.41□□□□□ -0.9
CHRNA3-204ENST00000559002 SETBP1Q9Y6X0 1596 aa9.41□□□□□ -0.9
CHRNA3-204ENST00000559002 IQGAP1P46940 1657 aa9.4□□□□□ -0.9
CHRNA3-204ENST00000559002 SLC26A8Q96RN1 970 aa9.4□□□□□ -0.9
CHRNA3-204ENST00000559002 DIP2AQ14689 1571 aa9.39□□□□□ -0.91
CHRNA3-204ENST00000559002 NBPF8Q3BBV2 869 aa9.39□□□□□ -0.91
CHRNA3-204ENST00000559002 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
CHRNA3-204ENST00000559002 C14orf93Q9H972 538 aaKnown RBP9.39□□□□□ -0.91
CHRNA3-204ENST00000559002 ADAMTS13Q76LX8 1427 aa9.39□□□□□ -0.91
CHRNA3-204ENST00000559002 ROCK2O75116 1388 aaKnown RBP9.38□□□□□ -0.91
CHRNA3-204ENST00000559002 LAMC1P11047 1609 aa9.38□□□□□ -0.91
CHRNA3-204ENST00000559002 ALKQ9UM73 1620 aa9.38□□□□□ -0.91
CHRNA3-204ENST00000559002 TBX22Q9Y458 520 aa9.38□□□□□ -0.91
CHRNA3-204ENST00000559002 RALGAPBQ86X10 1494 aa9.38□□□□□ -0.91
CHRNA3-204ENST00000559002 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
CHRNA3-204ENST00000559002 STRCQ7RTU9 1775 aa9.37□□□□□ -0.91
CHRNA3-204ENST00000559002 TRPM1Q7Z4N2 1603 aa9.36□□□□□ -0.91
CHRNA3-204ENST00000559002 TMEM132EQ6IEE7 984 aa9.36□□□□□ -0.91
CHRNA3-204ENST00000559002 CARD11Q9BXL7 1154 aa9.36□□□□□ -0.91
CHRNA3-204ENST00000559002 KIAA1210Q9ULL0 1709 aa9.36□□□□□ -0.91
CHRNA3-204ENST00000559002 METP08581 1390 aa9.36□□□□□ -0.91
CHRNA3-204ENST00000559002 PIK3R4Q99570 1358 aa9.36□□□□□ -0.91
CHRNA3-204ENST00000559002 NBPF1Q3BBV0 1214 aa9.35□□□□□ -0.91
CHRNA3-204ENST00000559002 ASXL1Q8IXJ9 1541 aa9.35□□□□□ -0.91
CHRNA3-204ENST00000559002 GPRASP1Q5JY77 1395 aa9.35□□□□□ -0.91
CHRNA3-204ENST00000559002 ADGRB1O14514 1584 aa9.34□□□□□ -0.91
CHRNA3-204ENST00000559002 YTHDC2Q9H6S0 1430 aaKnown RBP9.34□□□□□ -0.91
CHRNA3-204ENST00000559002 STK26Q9P289 416 aa9.34□□□□□ -0.91
CHRNA3-204ENST00000559002 LRPPRCP42704 1394 aaKnown RBP9.34□□□□□ -0.91
CHRNA3-204ENST00000559002 SETD1AO15047 1707 aaKnown RBP9.34□□□□□ -0.92
CHRNA3-204ENST00000559002 KCNA6P17658 529 aa9.33□□□□□ -0.92
CHRNA3-204ENST00000559002 AMOTL2Q9Y2J4 779 aa9.33□□□□□ -0.92
CHRNA3-204ENST00000559002 EIF3AQ14152 1382 aaKnown RBP9.33□□□□□ -0.92
CHRNA3-204ENST00000559002 PTPRUQ92729 1446 aa9.32□□□□□ -0.92
CHRNA3-204ENST00000559002 TRAK1Q9UPV9 953 aa9.32□□□□□ -0.92
CHRNA3-204ENST00000559002 ABCC11Q96J66 1382 aa9.32□□□□□ -0.92
CHRNA3-204ENST00000559002 POTEDQ86YR6 584 aa9.31□□□□□ -0.92
CHRNA3-204ENST00000559002 POGKQ9P215 609 aa9.31□□□□□ -0.92
CHRNA3-204ENST00000559002 NWD1Q149M9 1564 aa9.31□□□□□ -0.92
CHRNA3-204ENST00000559002 TECPR2O15040 1411 aa9.31□□□□□ -0.92
CHRNA3-204ENST00000559002 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
CHRNA3-204ENST00000559002 ZNF335Q9H4Z2 1342 aaPredicted RBP9.31□□□□□ -0.92
CHRNA3-204ENST00000559002 NKTRP30414 1462 aaKnown RBP9.3□□□□□ -0.92
CHRNA3-204ENST00000559002 USP47Q96K76 1375 aa9.3□□□□□ -0.92
CHRNA3-204ENST00000559002 XRN1Q8IZH2 1706 aaKnown RBP9.3□□□□□ -0.92
CHRNA3-204ENST00000559002 CPS1P31327 1500 aa9.3□□□□□ -0.92
CHRNA3-204ENST00000559002 DLC1Q96QB1 1528 aa9.3□□□□□ -0.92
CHRNA3-204ENST00000559002 EIF4G2P78344 907 aaKnown RBP eCLIP9.29□□□□□ -0.92
CHRNA3-204ENST00000559002 PRAM1Q96QH2 718 aa9.29□□□□□ -0.92
CHRNA3-204ENST00000559002 FAM135BQ49AJ0 1406 aa9.29□□□□□ -0.92
CHRNA3-204ENST00000559002 CENPJQ9HC77 1338 aaPredicted RBP9.29□□□□□ -0.92
CHRNA3-204ENST00000559002 KNDC1Q76NI1 1749 aa9.28□□□□□ -0.92
CHRNA3-204ENST00000559002 ROBO2Q9HCK4 1378 aa9.28□□□□□ -0.92
CHRNA3-204ENST00000559002 SAFB2Q14151 953 aaKnown RBP eCLIP9.28□□□□□ -0.92
CHRNA3-204ENST00000559002 C14orf37Q86TY3 774 aa9.28□□□□□ -0.92
CHRNA3-204ENST00000559002 PROSER2Q86WR7 435 aaPredicted RBP9.28□□□□□ -0.92
CHRNA3-204ENST00000559002 SIRT1Q96EB6 747 aa9.28□□□□□ -0.92
CHRNA3-204ENST00000559002 CHD2O14647 1828 aaKnown RBP9.28□□□□□ -0.92
CHRNA3-204ENST00000559002 HSPA5P11021 654 aaKnown RBP9.27□□□□□ -0.93
CHRNA3-204ENST00000559002 WAPLQ7Z5K2 1190 aa9.27□□□□□ -0.93
CHRNA3-204ENST00000559002 TMEM94Q12767 1356 aa9.26□□□□□ -0.93
CHRNA3-204ENST00000559002 PLEKHH1Q9ULM0 1364 aa9.26□□□□□ -0.93
CHRNA3-204ENST00000559002 ARHGEF28Q8N1W1 1705 aaKnown RBP9.26□□□□□ -0.93
CHRNA3-204ENST00000559002 ST20-MTHFSA0A0A6YYL1 179 aa9.26□□□□□ -0.93
CHRNA3-204ENST00000559002 RBM33Q96EV2 1170 aaKnown RBP9.25□□□□□ -0.93
CHRNA3-204ENST00000559002 MINK1Q8N4C8 1332 aaPredicted RBP9.25□□□□□ -0.93
CHRNA3-204ENST00000559002 LRRC7Q96NW7 1537 aa9.25□□□□□ -0.93
CHRNA3-204ENST00000559002 STRCP1A6NGW2 1772 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms