RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 THEMISQ8N1K5 641 aaPredicted RBP18.1■□□□□ 0.49
GABPB1-208ENST00000558970 SLIT1O75093 1534 aa18.08■□□□□ 0.48
GABPB1-208ENST00000558970 NEXMIFQ5QGS0 1516 aa18.08■□□□□ 0.48
GABPB1-208ENST00000558970 SPATA31E1Q6ZUB1 1445 aa18.07■□□□□ 0.48
GABPB1-208ENST00000558970 RIMS2Q9UQ26 1411 aa18.07■□□□□ 0.48
GABPB1-208ENST00000558970 TMEM2Q9UHN6 1383 aa18.06■□□□□ 0.48
GABPB1-208ENST00000558970 NCKAP5LQ9HCH0 1330 aa18.06■□□□□ 0.48
GABPB1-208ENST00000558970 NEURL4Q96JN8 1562 aa18.05■□□□□ 0.48
GABPB1-208ENST00000558970 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
GABPB1-208ENST00000558970 ARHGAP23Q9P227 1491 aa18.05■□□□□ 0.48
GABPB1-208ENST00000558970 IQGAP1P46940 1657 aa18.04■□□□□ 0.48
GABPB1-208ENST00000558970 SCAF11Q99590 1463 aaKnown RBP18.04■□□□□ 0.48
GABPB1-208ENST00000558970 ZFYVE9O95405 1425 aa18.04■□□□□ 0.48
GABPB1-208ENST00000558970 LTKP29376 864 aa18.03■□□□□ 0.48
GABPB1-208ENST00000558970 TXNDC2Q86VQ3 553 aa18.03■□□□□ 0.48
GABPB1-208ENST00000558970 ANKLE2Q86XL3 938 aa18.02■□□□□ 0.48
GABPB1-208ENST00000558970 BCANQ96GW7 911 aa18.02■□□□□ 0.48
GABPB1-208ENST00000558970 EID1Q9Y6B2 187 aa18.02■□□□□ 0.48
GABPB1-208ENST00000558970 KDM2AQ9Y2K7 1162 aa18.01■□□□□ 0.47
GABPB1-208ENST00000558970 DISP3Q9P2K9 1392 aa18.01■□□□□ 0.47
GABPB1-208ENST00000558970 IQSEC2Q5JU85 1478 aa18.01■□□□□ 0.47
GABPB1-208ENST00000558970 SOCS7O14512 581 aa17.99■□□□□ 0.47
GABPB1-208ENST00000558970 TONSLQ96HA7 1378 aa17.99■□□□□ 0.47
GABPB1-208ENST00000558970 DCAF11Q8TEB1 546 aa17.98■□□□□ 0.47
GABPB1-208ENST00000558970 NRXN3Q9Y4C0 1643 aa17.98■□□□□ 0.47
GABPB1-208ENST00000558970 NPHP4O75161 1426 aaPredicted RBP17.98■□□□□ 0.47
GABPB1-208ENST00000558970 ILDR2Q71H61 639 aa17.97■□□□□ 0.47
GABPB1-208ENST00000558970 HDGFP51858 240 aaKnown RBP17.96■□□□□ 0.47
GABPB1-208ENST00000558970 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.96■□□□□ 0.47
GABPB1-208ENST00000558970 LTBP4Q8N2S1 1624 aa17.95■□□□□ 0.46
GABPB1-208ENST00000558970 L3MBTL2Q969R5 705 aa17.95■□□□□ 0.46
GABPB1-208ENST00000558970 RPGRIP1LQ68CZ1 1315 aa17.95■□□□□ 0.46
GABPB1-208ENST00000558970 ADGRF5Q8IZF2 1346 aa17.95■□□□□ 0.46
GABPB1-208ENST00000558970 CLSPNQ9HAW4 1339 aa17.95■□□□□ 0.46
GABPB1-208ENST00000558970 MYOM2P54296 1465 aa17.94■□□□□ 0.46
GABPB1-208ENST00000558970 PLEKHG1Q9ULL1 1385 aa17.93■□□□□ 0.46
GABPB1-208ENST00000558970 VGFO15240 615 aaPredicted RBP17.93■□□□□ 0.46
GABPB1-208ENST00000558970 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
GABPB1-208ENST00000558970 MED14O60244 1454 aa17.93■□□□□ 0.46
GABPB1-208ENST00000558970 SETD1AO15047 1707 aaKnown RBP17.92■□□□□ 0.46
GABPB1-208ENST00000558970 SETBP1Q9Y6X0 1596 aa17.91■□□□□ 0.46
GABPB1-208ENST00000558970 ALKQ9UM73 1620 aa17.9■□□□□ 0.46
GABPB1-208ENST00000558970 PIK3C2GO75747 1445 aa17.89■□□□□ 0.45
GABPB1-208ENST00000558970 LAMC1P11047 1609 aa17.88■□□□□ 0.45
GABPB1-208ENST00000558970 STRCP1A6NGW2 1772 aa17.88■□□□□ 0.45
GABPB1-208ENST00000558970 ADAMTS13Q76LX8 1427 aa17.88■□□□□ 0.45
GABPB1-208ENST00000558970 DIP2AQ14689 1571 aa17.87■□□□□ 0.45
GABPB1-208ENST00000558970 NRXN1Q9ULB1 1477 aa17.87■□□□□ 0.45
GABPB1-208ENST00000558970 TRPM1Q7Z4N2 1603 aa17.87■□□□□ 0.45
GABPB1-208ENST00000558970 CHD2O14647 1828 aaKnown RBP17.86■□□□□ 0.45
GABPB1-208ENST00000558970 PRAG1Q86YV5 1406 aa17.85■□□□□ 0.45
GABPB1-208ENST00000558970 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
GABPB1-208ENST00000558970 KIAA1210Q9ULL0 1709 aa17.84■□□□□ 0.45
GABPB1-208ENST00000558970 ASXL1Q8IXJ9 1541 aa17.83■□□□□ 0.45
GABPB1-208ENST00000558970 METP08581 1390 aa17.82■□□□□ 0.44
GABPB1-208ENST00000558970 ZNF335Q9H4Z2 1342 aaPredicted RBP17.82■□□□□ 0.44
GABPB1-208ENST00000558970 TMEM132EQ6IEE7 984 aa17.82■□□□□ 0.44
GABPB1-208ENST00000558970 NBPF8Q3BBV2 869 aa17.81■□□□□ 0.44
GABPB1-208ENST00000558970 UBAP1LF5GYI3 381 aa17.8■□□□□ 0.44
GABPB1-208ENST00000558970 XRN1Q8IZH2 1706 aaKnown RBP17.79■□□□□ 0.44
GABPB1-208ENST00000558970 TBX22Q9Y458 520 aa17.79■□□□□ 0.44
GABPB1-208ENST00000558970 PTPRUQ92729 1446 aa17.79■□□□□ 0.44
GABPB1-208ENST00000558970 STK26Q9P289 416 aa17.78■□□□□ 0.44
GABPB1-208ENST00000558970 NWD1Q149M9 1564 aa17.78■□□□□ 0.44
GABPB1-208ENST00000558970 NBPF1Q3BBV0 1214 aa17.77■□□□□ 0.44
GABPB1-208ENST00000558970 STAC3Q96MF2 364 aa17.77■□□□□ 0.44
GABPB1-208ENST00000558970 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.44
GABPB1-208ENST00000558970 ADGRB1O14514 1584 aa17.77■□□□□ 0.44
GABPB1-208ENST00000558970 KNDC1Q76NI1 1749 aa17.76■□□□□ 0.43
GABPB1-208ENST00000558970 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
GABPB1-208ENST00000558970 RBM33Q96EV2 1170 aaKnown RBP17.75■□□□□ 0.43
GABPB1-208ENST00000558970 ROCK2O75116 1388 aaKnown RBP17.75■□□□□ 0.43
GABPB1-208ENST00000558970 ARHGEF28Q8N1W1 1705 aaKnown RBP17.75■□□□□ 0.43
GABPB1-208ENST00000558970 TIMELESSQ9UNS1 1208 aa17.74■□□□□ 0.43
GABPB1-208ENST00000558970 AMOTL2Q9Y2J4 779 aa17.74■□□□□ 0.43
GABPB1-208ENST00000558970 YTHDC2Q9H6S0 1430 aaKnown RBP17.73■□□□□ 0.43
GABPB1-208ENST00000558970 KCNA6P17658 529 aa17.73■□□□□ 0.43
GABPB1-208ENST00000558970 RALGAPBQ86X10 1494 aa17.73■□□□□ 0.43
GABPB1-208ENST00000558970 PIK3R4Q99570 1358 aa17.72■□□□□ 0.43
GABPB1-208ENST00000558970 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
GABPB1-208ENST00000558970 CPS1P31327 1500 aa17.71■□□□□ 0.43
GABPB1-208ENST00000558970 NALCNQ8IZF0 1738 aa17.69■□□□□ 0.42
GABPB1-208ENST00000558970 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
GABPB1-208ENST00000558970 LRPPRCP42704 1394 aaKnown RBP17.68■□□□□ 0.42
GABPB1-208ENST00000558970 TOM1O60784 492 aa17.68■□□□□ 0.42
GABPB1-208ENST00000558970 SAFB2Q14151 953 aaKnown RBP eCLIP17.68■□□□□ 0.42
GABPB1-208ENST00000558970 PROSER2Q86WR7 435 aaPredicted RBP17.68■□□□□ 0.42
GABPB1-208ENST00000558970 QRICH2Q9H0J4 1663 aa17.67■□□□□ 0.42
GABPB1-208ENST00000558970 LRRC7Q96NW7 1537 aa17.67■□□□□ 0.42
GABPB1-208ENST00000558970 ROBO2Q9HCK4 1378 aa17.67■□□□□ 0.42
GABPB1-208ENST00000558970 CARD11Q9BXL7 1154 aa17.67■□□□□ 0.42
GABPB1-208ENST00000558970 C14orf37Q86TY3 774 aa17.66■□□□□ 0.42
GABPB1-208ENST00000558970 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
GABPB1-208ENST00000558970 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.65■□□□□ 0.42
GABPB1-208ENST00000558970 WAPLQ7Z5K2 1190 aa17.65■□□□□ 0.42
GABPB1-208ENST00000558970 TMEM94Q12767 1356 aa17.65■□□□□ 0.42
GABPB1-208ENST00000558970 PTCH1Q13635 1447 aa17.64■□□□□ 0.42
GABPB1-208ENST00000558970 DLC1Q96QB1 1528 aa17.64■□□□□ 0.41
GABPB1-208ENST00000558970 ABCC11Q96J66 1382 aa17.64■□□□□ 0.41
GABPB1-208ENST00000558970 TECPR2O15040 1411 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms