RNA–Protein interactions for RNA: ENST00000558926.1

AP3S2-207, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-207ENST00000558926 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
AP3S2-207ENST00000558926 TMEM131LA2VDJ0 1609 aa17.09■□□□□ 0.33
AP3S2-207ENST00000558926 TRIM52Q96A61 297 aa17.08■□□□□ 0.32
AP3S2-207ENST00000558926 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.32
AP3S2-207ENST00000558926 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
AP3S2-207ENST00000558926 HSPA1LP34931 641 aa17.07■□□□□ 0.32
AP3S2-207ENST00000558926 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
AP3S2-207ENST00000558926 HDGFP51858 240 aaKnown RBP17.05■□□□□ 0.32
AP3S2-207ENST00000558926 NAIPQ13075 1403 aa17.04■□□□□ 0.32
AP3S2-207ENST00000558926 SPHKAPQ2M3C7 1700 aa17.04■□□□□ 0.32
AP3S2-207ENST00000558926 PROSER2Q86WR7 435 aaPredicted RBP17.04■□□□□ 0.32
AP3S2-207ENST00000558926 KCNA6P17658 529 aa17.03■□□□□ 0.32
AP3S2-207ENST00000558926 ZNF326Q5BKZ1 582 aaKnown RBP17.03■□□□□ 0.32
AP3S2-207ENST00000558926 ZFYVE9O95405 1425 aa17.03■□□□□ 0.32
AP3S2-207ENST00000558926 ALKQ9UM73 1620 aa17.03■□□□□ 0.32
AP3S2-207ENST00000558926 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
AP3S2-207ENST00000558926 TMEM94Q12767 1356 aa17.01■□□□□ 0.31
AP3S2-207ENST00000558926 PLEKHG1Q9ULL1 1385 aa17.01■□□□□ 0.31
AP3S2-207ENST00000558926 CHD2O14647 1828 aaKnown RBP16.98■□□□□ 0.31
AP3S2-207ENST00000558926 HFM1A2PYH4 1435 aa16.97■□□□□ 0.31
AP3S2-207ENST00000558926 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
AP3S2-207ENST00000558926 ILDR2Q71H61 639 aa16.96■□□□□ 0.31
AP3S2-207ENST00000558926 C14orf37Q86TY3 774 aa16.96■□□□□ 0.31
AP3S2-207ENST00000558926 KIF1BO60333 1816 aa16.96■□□□□ 0.3
AP3S2-207ENST00000558926 CLTCL1P53675 1640 aa16.96■□□□□ 0.3
AP3S2-207ENST00000558926 FOXD1Q16676 465 aa16.94■□□□□ 0.3
AP3S2-207ENST00000558926 TBX22Q9Y458 520 aa16.94■□□□□ 0.3
AP3S2-207ENST00000558926 NWD1Q149M9 1564 aa16.94■□□□□ 0.3
AP3S2-207ENST00000558926 ADAMTS13Q76LX8 1427 aa16.92■□□□□ 0.3
AP3S2-207ENST00000558926 NKTRP30414 1462 aaKnown RBP16.92■□□□□ 0.3
AP3S2-207ENST00000558926 TRPM2O94759 1503 aa16.91■□□□□ 0.3
AP3S2-207ENST00000558926 MSH6P52701 1360 aa16.91■□□□□ 0.3
AP3S2-207ENST00000558926 AMOTL2Q9Y2J4 779 aa16.89■□□□□ 0.29
AP3S2-207ENST00000558926 DIP2AQ14689 1571 aa16.88■□□□□ 0.29
AP3S2-207ENST00000558926 MED1Q15648 1581 aaPredicted RBP16.88■□□□□ 0.29
AP3S2-207ENST00000558926 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
AP3S2-207ENST00000558926 NRXN3Q9Y4C0 1643 aa16.86■□□□□ 0.29
AP3S2-207ENST00000558926 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
AP3S2-207ENST00000558926 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
AP3S2-207ENST00000558926 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
AP3S2-207ENST00000558926 PTPRUQ92729 1446 aa16.85■□□□□ 0.29
AP3S2-207ENST00000558926 MPHOSPH9Q99550 1183 aa16.84■□□□□ 0.29
AP3S2-207ENST00000558926 FAM135BQ49AJ0 1406 aa16.84■□□□□ 0.29
AP3S2-207ENST00000558926 METP08581 1390 aa16.83■□□□□ 0.28
AP3S2-207ENST00000558926 ATF3P18847 181 aa16.83■□□□□ 0.28
AP3S2-207ENST00000558926 RGL3Q3MIN7 710 aa16.83■□□□□ 0.28
AP3S2-207ENST00000558926 PIK3R4Q99570 1358 aa16.83■□□□□ 0.28
AP3S2-207ENST00000558926 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.83■□□□□ 0.28
AP3S2-207ENST00000558926 SETBP1Q9Y6X0 1596 aa16.83■□□□□ 0.28
AP3S2-207ENST00000558926 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
AP3S2-207ENST00000558926 VGFO15240 615 aaPredicted RBP16.8■□□□□ 0.28
AP3S2-207ENST00000558926 C19orf44Q9H6X5 657 aa16.8■□□□□ 0.28
AP3S2-207ENST00000558926 SETD5Q9C0A6 1442 aa16.79■□□□□ 0.28
AP3S2-207ENST00000558926 PPLO60437 1756 aa16.79■□□□□ 0.28
AP3S2-207ENST00000558926 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
AP3S2-207ENST00000558926 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
AP3S2-207ENST00000558926 CADPS2Q86UW7 1296 aa16.78■□□□□ 0.28
AP3S2-207ENST00000558926 SOCS7O14512 581 aa16.77■□□□□ 0.28
AP3S2-207ENST00000558926 NCOA3Q9Y6Q9 1424 aa16.76■□□□□ 0.27
AP3S2-207ENST00000558926 RPGRIP1LQ68CZ1 1315 aa16.75■□□□□ 0.27
AP3S2-207ENST00000558926 RAB3GAP2Q9H2M9 1393 aa16.75■□□□□ 0.27
AP3S2-207ENST00000558926 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
AP3S2-207ENST00000558926 ADGRF5Q8IZF2 1346 aa16.72■□□□□ 0.27
AP3S2-207ENST00000558926 NALCNQ8IZF0 1738 aa16.71■□□□□ 0.27
AP3S2-207ENST00000558926 STK26Q9P289 416 aa16.71■□□□□ 0.27
AP3S2-207ENST00000558926 BRINP3Q76B58 766 aa16.7■□□□□ 0.26
AP3S2-207ENST00000558926 ROBO2Q9HCK4 1378 aa16.69■□□□□ 0.26
AP3S2-207ENST00000558926 COL16A1Q07092 1604 aaPredicted RBP16.69■□□□□ 0.26
AP3S2-207ENST00000558926 SPATA31E1Q6ZUB1 1445 aa16.69■□□□□ 0.26
AP3S2-207ENST00000558926 IFT172Q9UG01 1749 aa16.68■□□□□ 0.26
AP3S2-207ENST00000558926 DDX17Q92841 729 aaKnown RBP16.68■□□□□ 0.26
AP3S2-207ENST00000558926 ADGRL3Q9HAR2 1447 aa16.68■□□□□ 0.26
AP3S2-207ENST00000558926 JCADQ9P266 1359 aa16.67■□□□□ 0.26
AP3S2-207ENST00000558926 TMEM132EQ6IEE7 984 aa16.67■□□□□ 0.26
AP3S2-207ENST00000558926 ACIN1Q9UKV3 1341 aaKnown RBP16.67■□□□□ 0.26
AP3S2-207ENST00000558926 DCCP43146 1447 aa16.66■□□□□ 0.26
AP3S2-207ENST00000558926 MST1RQ04912 1400 aa16.66■□□□□ 0.26
AP3S2-207ENST00000558926 RGS17Q9UGC6 210 aaPredicted RBP16.66■□□□□ 0.26
AP3S2-207ENST00000558926 ANKRD30BQ9BXX2 1392 aa16.65■□□□□ 0.26
AP3S2-207ENST00000558926 NUTM2BA6NNL0 878 aaPredicted RBP16.65■□□□□ 0.26
AP3S2-207ENST00000558926 NUTM2EB1AL46 878 aaPredicted RBP16.65■□□□□ 0.26
AP3S2-207ENST00000558926 MEX3CQ5U5Q3 659 aaKnown RBP16.65■□□□□ 0.26
AP3S2-207ENST00000558926 NUTM2AQ8IVF1 878 aaPredicted RBP16.65■□□□□ 0.26
AP3S2-207ENST00000558926 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
AP3S2-207ENST00000558926 AHDC1Q5TGY3 1603 aaPredicted RBP16.64■□□□□ 0.25
AP3S2-207ENST00000558926 PTCH1Q13635 1447 aa16.63■□□□□ 0.25
AP3S2-207ENST00000558926 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
AP3S2-207ENST00000558926 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
AP3S2-207ENST00000558926 ORAI2Q96SN7 254 aa16.61■□□□□ 0.25
AP3S2-207ENST00000558926 KDM2AQ9Y2K7 1162 aa16.61■□□□□ 0.25
AP3S2-207ENST00000558926 POTEAQ6S8J7 498 aa16.6■□□□□ 0.25
AP3S2-207ENST00000558926 C1orf167Q5SNV9 1468 aa16.6■□□□□ 0.25
AP3S2-207ENST00000558926 NHSL1Q5SYE7 1610 aa16.59■□□□□ 0.25
AP3S2-207ENST00000558926 SHPRHQ149N8 1683 aa16.59■□□□□ 0.25
AP3S2-207ENST00000558926 CFAP70Q5T0N1 1121 aa16.59■□□□□ 0.25
AP3S2-207ENST00000558926 PIK3C2GO75747 1445 aa16.59■□□□□ 0.25
AP3S2-207ENST00000558926 SPATA31A6Q5VVP1 1343 aa16.58■□□□□ 0.24
AP3S2-207ENST00000558926 LRP6O75581 1613 aa16.58■□□□□ 0.24
AP3S2-207ENST00000558926 LRPPRCP42704 1394 aaKnown RBP16.57■□□□□ 0.24
AP3S2-207ENST00000558926 PLEKHH1Q9ULM0 1364 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms