RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 KDM2AQ9Y2K7 1162 aa18.21■□□□□ 0.51
SMAD3-207ENST00000558763 GPRASP1Q5JY77 1395 aa18.2■□□□□ 0.5
SMAD3-207ENST00000558763 CCDC7Q96M83 1385 aa18.2■□□□□ 0.5
SMAD3-207ENST00000558763 ADGRB3O60242 1522 aa18.19■□□□□ 0.5
SMAD3-207ENST00000558763 MYO3AQ8NEV4 1616 aa18.19■□□□□ 0.5
SMAD3-207ENST00000558763 IFT172Q9UG01 1749 aa18.18■□□□□ 0.5
SMAD3-207ENST00000558763 MYO5BQ9ULV0 1848 aa18.18■□□□□ 0.5
SMAD3-207ENST00000558763 TMEM131LA2VDJ0 1609 aa18.17■□□□□ 0.5
SMAD3-207ENST00000558763 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
SMAD3-207ENST00000558763 NLRP1Q9C000 1473 aa18.15■□□□□ 0.5
SMAD3-207ENST00000558763 KIF7Q2M1P5 1343 aa18.15■□□□□ 0.5
SMAD3-207ENST00000558763 ROCK2O75116 1388 aaKnown RBP18.15■□□□□ 0.5
SMAD3-207ENST00000558763 CARD11Q9BXL7 1154 aa18.14■□□□□ 0.49
SMAD3-207ENST00000558763 UBR1Q8IWV7 1749 aa18.13■□□□□ 0.49
SMAD3-207ENST00000558763 NBPF1Q3BBV0 1214 aa18.12■□□□□ 0.49
SMAD3-207ENST00000558763 A2ML1A8K2U0 1454 aa18.12■□□□□ 0.49
SMAD3-207ENST00000558763 CEP170BQ9Y4F5 1589 aaPredicted RBP18.11■□□□□ 0.49
SMAD3-207ENST00000558763 MYOM2P54296 1465 aa18.11■□□□□ 0.49
SMAD3-207ENST00000558763 KIAA1210Q9ULL0 1709 aa18.1■□□□□ 0.49
SMAD3-207ENST00000558763 IQGAP1P46940 1657 aa18.1■□□□□ 0.49
SMAD3-207ENST00000558763 KDM5AP29375 1690 aaKnown RBP18.09■□□□□ 0.49
SMAD3-207ENST00000558763 ZNF142P52746 1687 aaPredicted RBP18.09■□□□□ 0.49
SMAD3-207ENST00000558763 SETD1BQ9UPS6 1966 aaKnown RBP18.09■□□□□ 0.49
SMAD3-207ENST00000558763 PPLO60437 1756 aa18.09■□□□□ 0.49
SMAD3-207ENST00000558763 NEXMIFQ5QGS0 1516 aa18.08■□□□□ 0.49
SMAD3-207ENST00000558763 NRXN1Q9ULB1 1477 aa18.08■□□□□ 0.48
SMAD3-207ENST00000558763 NUTM2DQ5VT03 806 aaPredicted RBP18.08■□□□□ 0.48
SMAD3-207ENST00000558763 YTHDC1Q96MU7 727 aaKnown RBP18.08■□□□□ 0.48
SMAD3-207ENST00000558763 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
SMAD3-207ENST00000558763 STAC3Q96MF2 364 aa18.06■□□□□ 0.48
SMAD3-207ENST00000558763 RPGRIP1LQ68CZ1 1315 aa18.04■□□□□ 0.48
SMAD3-207ENST00000558763 ANP32CO43423 234 aa18.04■□□□□ 0.48
SMAD3-207ENST00000558763 RIMS2Q9UQ26 1411 aa18.03■□□□□ 0.48
SMAD3-207ENST00000558763 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
SMAD3-207ENST00000558763 TMEM2Q9UHN6 1383 aa18.02■□□□□ 0.48
SMAD3-207ENST00000558763 CCER2I3L3R5 266 aa18.02■□□□□ 0.48
SMAD3-207ENST00000558763 ADGRF5Q8IZF2 1346 aa18.02■□□□□ 0.48
SMAD3-207ENST00000558763 ZFYVE9O95405 1425 aa18.02■□□□□ 0.47
SMAD3-207ENST00000558763 CENPBP07199 599 aaPredicted RBP18.01■□□□□ 0.47
SMAD3-207ENST00000558763 THEMISQ8N1K5 641 aaPredicted RBP18.01■□□□□ 0.47
SMAD3-207ENST00000558763 TESK2Q96S53 571 aa18■□□□□ 0.47
SMAD3-207ENST00000558763 SLIT1O75093 1534 aa17.99■□□□□ 0.47
SMAD3-207ENST00000558763 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
SMAD3-207ENST00000558763 ARHGAP23Q9P227 1491 aa17.98■□□□□ 0.47
SMAD3-207ENST00000558763 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
SMAD3-207ENST00000558763 PIK3C2GO75747 1445 aa17.97■□□□□ 0.47
SMAD3-207ENST00000558763 LMTK3Q96Q04 1460 aa17.96■□□□□ 0.47
SMAD3-207ENST00000558763 LTKP29376 864 aa17.96■□□□□ 0.47
SMAD3-207ENST00000558763 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMAD3-207ENST00000558763 TXNDC2Q86VQ3 553 aa17.95■□□□□ 0.46
SMAD3-207ENST00000558763 DISP3Q9P2K9 1392 aa17.95■□□□□ 0.46
SMAD3-207ENST00000558763 SETBP1Q9Y6X0 1596 aa17.95■□□□□ 0.46
SMAD3-207ENST00000558763 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
SMAD3-207ENST00000558763 HDGFP51858 240 aaKnown RBP17.94■□□□□ 0.46
SMAD3-207ENST00000558763 HSPA2P54652 639 aa17.93■□□□□ 0.46
SMAD3-207ENST00000558763 PRKRIP1Q9H875 184 aaPredicted RBP17.93■□□□□ 0.46
SMAD3-207ENST00000558763 ADGRB1O14514 1584 aa17.93■□□□□ 0.46
SMAD3-207ENST00000558763 CFAP70Q5T0N1 1121 aa17.92■□□□□ 0.46
SMAD3-207ENST00000558763 BCANQ96GW7 911 aa17.92■□□□□ 0.46
SMAD3-207ENST00000558763 NRXN3Q9Y4C0 1643 aa17.91■□□□□ 0.46
SMAD3-207ENST00000558763 ANKLE2Q86XL3 938 aa17.9■□□□□ 0.46
SMAD3-207ENST00000558763 PLEKHG1Q9ULL1 1385 aa17.89■□□□□ 0.45
SMAD3-207ENST00000558763 ALKQ9UM73 1620 aa17.89■□□□□ 0.45
SMAD3-207ENST00000558763 POLR3GLQ9BT43 218 aa17.88■□□□□ 0.45
SMAD3-207ENST00000558763 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
SMAD3-207ENST00000558763 C14orf93Q9H972 538 aaKnown RBP17.88■□□□□ 0.45
SMAD3-207ENST00000558763 NCKAP5LQ9HCH0 1330 aa17.87■□□□□ 0.45
SMAD3-207ENST00000558763 SETD1AO15047 1707 aaKnown RBP17.86■□□□□ 0.45
SMAD3-207ENST00000558763 MYOM1P52179 1685 aa17.86■□□□□ 0.45
SMAD3-207ENST00000558763 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
SMAD3-207ENST00000558763 ASXL1Q8IXJ9 1541 aa17.85■□□□□ 0.45
SMAD3-207ENST00000558763 CCDC184Q52MB2 194 aa17.85■□□□□ 0.45
SMAD3-207ENST00000558763 SLC26A8Q96RN1 970 aa17.85■□□□□ 0.45
SMAD3-207ENST00000558763 ADAMTS13Q76LX8 1427 aa17.85■□□□□ 0.45
SMAD3-207ENST00000558763 EIF3AQ14152 1382 aaKnown RBP17.84■□□□□ 0.45
SMAD3-207ENST00000558763 NPHP4O75161 1426 aaPredicted RBP17.83■□□□□ 0.45
SMAD3-207ENST00000558763 TMF1P82094 1093 aa17.82■□□□□ 0.44
SMAD3-207ENST00000558763 ARHGEF28Q8N1W1 1705 aaKnown RBP17.82■□□□□ 0.44
SMAD3-207ENST00000558763 SBNO2Q9Y2G9 1366 aa17.81■□□□□ 0.44
SMAD3-207ENST00000558763 MED14O60244 1454 aa17.81■□□□□ 0.44
SMAD3-207ENST00000558763 METP08581 1390 aa17.81■□□□□ 0.44
SMAD3-207ENST00000558763 PER1O15534 1290 aaPredicted RBP17.8■□□□□ 0.44
SMAD3-207ENST00000558763 QRICH2Q9H0J4 1663 aa17.8■□□□□ 0.44
SMAD3-207ENST00000558763 STRCQ7RTU9 1775 aa17.8■□□□□ 0.44
SMAD3-207ENST00000558763 DIP2AQ14689 1571 aa17.8■□□□□ 0.44
SMAD3-207ENST00000558763 STK26Q9P289 416 aa17.79■□□□□ 0.44
SMAD3-207ENST00000558763 AEBP2Q6ZN18 517 aaPredicted RBP17.78■□□□□ 0.44
SMAD3-207ENST00000558763 TRAK1Q9UPV9 953 aa17.78■□□□□ 0.44
SMAD3-207ENST00000558763 YTHDC2Q9H6S0 1430 aaKnown RBP17.77■□□□□ 0.44
SMAD3-207ENST00000558763 TBX22Q9Y458 520 aa17.76■□□□□ 0.43
SMAD3-207ENST00000558763 KTN1Q86UP2 1357 aaKnown RBP17.74■□□□□ 0.43
SMAD3-207ENST00000558763 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
SMAD3-207ENST00000558763 PTPRUQ92729 1446 aa17.73■□□□□ 0.43
SMAD3-207ENST00000558763 LRPPRCP42704 1394 aaKnown RBP17.73■□□□□ 0.43
SMAD3-207ENST00000558763 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
SMAD3-207ENST00000558763 CENPJQ9HC77 1338 aaPredicted RBP17.72■□□□□ 0.43
SMAD3-207ENST00000558763 PANK3Q9H999 370 aa17.72■□□□□ 0.43
SMAD3-207ENST00000558763 MRS2Q9HD23 443 aa17.72■□□□□ 0.43
SMAD3-207ENST00000558763 KNDC1Q76NI1 1749 aa17.72■□□□□ 0.43
SMAD3-207ENST00000558763 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms