RNA–Protein interactions for RNA: ENST00000558672.1

LHX6-208, Transcript of LIM homeobox 6, humanhuman

TSL 4

Gene LHX6, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6-208ENST00000558672 ANKRD50Q9ULJ7 1429 aa21.95■■□□□ 1.1
LHX6-208ENST00000558672 CHD2O14647 1828 aaKnown RBP21.94■■□□□ 1.1
LHX6-208ENST00000558672 KCNA6P17658 529 aa21.94■■□□□ 1.1
LHX6-208ENST00000558672 STAG3Q9UJ98 1225 aa21.93■■□□□ 1.1
LHX6-208ENST00000558672 SLC26A8Q96RN1 970 aa21.91■■□□□ 1.1
LHX6-208ENST00000558672 SLC52A1Q9NWF4 448 aa21.91■■□□□ 1.1
LHX6-208ENST00000558672 E9PCH4 1651 aa21.9■■□□□ 1.1
LHX6-208ENST00000558672 PLEKHG1Q9ULL1 1385 aa21.88■■□□□ 1.09
LHX6-208ENST00000558672 IQGAP3Q86VI3 1631 aa21.86■■□□□ 1.09
LHX6-208ENST00000558672 RIMS2Q9UQ26 1411 aa21.86■■□□□ 1.09
LHX6-208ENST00000558672 RBM33Q96EV2 1170 aaKnown RBP21.85■■□□□ 1.09
LHX6-208ENST00000558672 PHLPP1O60346 1717 aa21.84■■□□□ 1.09
LHX6-208ENST00000558672 PROSER2Q86WR7 435 aaPredicted RBP21.84■■□□□ 1.09
LHX6-208ENST00000558672 COL16A1Q07092 1604 aaPredicted RBP21.84■■□□□ 1.09
LHX6-208ENST00000558672 DIP2AQ14689 1571 aa21.82■■□□□ 1.08
LHX6-208ENST00000558672 ADAMTS13Q76LX8 1427 aa21.82■■□□□ 1.08
LHX6-208ENST00000558672 FAM50AQ14320 339 aaKnown RBP21.81■■□□□ 1.08
LHX6-208ENST00000558672 MSH6P52701 1360 aa21.81■■□□□ 1.08
LHX6-208ENST00000558672 ROCK1Q13464 1354 aa21.79■■□□□ 1.08
LHX6-208ENST00000558672 NCOA3Q9Y6Q9 1424 aa21.78■■□□□ 1.08
LHX6-208ENST00000558672 POTEAQ6S8J7 498 aa21.77■■□□□ 1.08
LHX6-208ENST00000558672 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.77■■□□□ 1.08
LHX6-208ENST00000558672 AHDC1Q5TGY3 1603 aaPredicted RBP21.75■■□□□ 1.07
LHX6-208ENST00000558672 NRXN3Q9Y4C0 1643 aa21.75■■□□□ 1.07
LHX6-208ENST00000558672 SETD1AO15047 1707 aaKnown RBP21.75■■□□□ 1.07
LHX6-208ENST00000558672 SLAIN2Q9P270 581 aa21.74■■□□□ 1.07
LHX6-208ENST00000558672 TBX22Q9Y458 520 aa21.74■■□□□ 1.07
LHX6-208ENST00000558672 PIK3R4Q99570 1358 aa21.73■■□□□ 1.07
LHX6-208ENST00000558672 JCADQ9P266 1359 aa21.73■■□□□ 1.07
LHX6-208ENST00000558672 XRN1Q8IZH2 1706 aaKnown RBP21.72■■□□□ 1.07
LHX6-208ENST00000558672 LRP6O75581 1613 aa21.72■■□□□ 1.07
LHX6-208ENST00000558672 TRPM2O94759 1503 aa21.71■■□□□ 1.07
LHX6-208ENST00000558672 PPP1R15AO75807 674 aaPredicted RBP21.71■■□□□ 1.07
LHX6-208ENST00000558672 SHPRHQ149N8 1683 aa21.71■■□□□ 1.07
LHX6-208ENST00000558672 SPHKAPQ2M3C7 1700 aa21.7■■□□□ 1.06
LHX6-208ENST00000558672 BCANQ96GW7 911 aa21.7■■□□□ 1.06
LHX6-208ENST00000558672 PTPRUQ92729 1446 aa21.7■■□□□ 1.06
LHX6-208ENST00000558672 SETBP1Q9Y6X0 1596 aa21.69■■□□□ 1.06
LHX6-208ENST00000558672 HDGFP51858 240 aaKnown RBP21.68■■□□□ 1.06
LHX6-208ENST00000558672 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.68■■□□□ 1.06
LHX6-208ENST00000558672 NUTM2DQ5VT03 806 aaPredicted RBP21.65■■□□□ 1.06
LHX6-208ENST00000558672 DCCP43146 1447 aa21.63■■□□□ 1.05
LHX6-208ENST00000558672 NUP155O75694 1391 aa21.63■■□□□ 1.05
LHX6-208ENST00000558672 CHGAP10645 457 aaKnown RBP21.63■■□□□ 1.05
LHX6-208ENST00000558672 NHSL1Q5SYE7 1610 aa21.62■■□□□ 1.05
LHX6-208ENST00000558672 C19orf44Q9H6X5 657 aa21.61■■□□□ 1.05
LHX6-208ENST00000558672 SPATA31A6Q5VVP1 1343 aa21.6■■□□□ 1.05
LHX6-208ENST00000558672 CADPS2Q86UW7 1296 aa21.6■■□□□ 1.05
LHX6-208ENST00000558672 CLTCL1P53675 1640 aa21.59■■□□□ 1.05
LHX6-208ENST00000558672 ASXL1Q8IXJ9 1541 aa21.59■■□□□ 1.05
LHX6-208ENST00000558672 NEXMIFQ5QGS0 1516 aa21.58■■□□□ 1.04
LHX6-208ENST00000558672 MST1RQ04912 1400 aa21.57■■□□□ 1.04
LHX6-208ENST00000558672 AMOTL2Q9Y2J4 779 aa21.57■■□□□ 1.04
LHX6-208ENST00000558672 NALCNQ8IZF0 1738 aa21.57■■□□□ 1.04
LHX6-208ENST00000558672 BRINP3Q76B58 766 aa21.55■■□□□ 1.04
LHX6-208ENST00000558672 C14orf37Q86TY3 774 aa21.55■■□□□ 1.04
LHX6-208ENST00000558672 METP08581 1390 aa21.54■■□□□ 1.04
LHX6-208ENST00000558672 ATF3P18847 181 aa21.54■■□□□ 1.04
LHX6-208ENST00000558672 SETD5Q9C0A6 1442 aa21.53■■□□□ 1.04
LHX6-208ENST00000558672 ADGRL3Q9HAR2 1447 aa21.52■■□□□ 1.04
LHX6-208ENST00000558672 LAMC1P11047 1609 aa21.51■■□□□ 1.03
LHX6-208ENST00000558672 KIF1BO60333 1816 aa21.5■■□□□ 1.03
LHX6-208ENST00000558672 RRBP1Q9P2E9 1410 aaKnown RBP21.48■■□□□ 1.03
LHX6-208ENST00000558672 ITGAEP38570 1179 aa21.48■■□□□ 1.03
LHX6-208ENST00000558672 CDK12Q9NYV4 1490 aaPredicted RBP21.47■■□□□ 1.03
LHX6-208ENST00000558672 PRAG1Q86YV5 1406 aa21.46■■□□□ 1.03
LHX6-208ENST00000558672 ZNF772Q68DY9 489 aaPredicted RBP21.46■■□□□ 1.03
LHX6-208ENST00000558672 NAIPQ13075 1403 aa21.46■■□□□ 1.03
LHX6-208ENST00000558672 PTCH1Q13635 1447 aa21.45■■□□□ 1.02
LHX6-208ENST00000558672 MEX3CQ5U5Q3 659 aaKnown RBP21.44■■□□□ 1.02
LHX6-208ENST00000558672 PPLO60437 1756 aa21.41■■□□□ 1.02
LHX6-208ENST00000558672 PNPLA6Q8IY17 1366 aa21.41■■□□□ 1.02
LHX6-208ENST00000558672 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
LHX6-208ENST00000558672 UPF1Q92900 1129 aaKnown RBP eCLIP21.4■■□□□ 1.02
LHX6-208ENST00000558672 C1orf167Q5SNV9 1468 aa21.39■■□□□ 1.02
LHX6-208ENST00000558672 PPARGC1BQ86YN6 1023 aaKnown RBP21.39■■□□□ 1.01
LHX6-208ENST00000558672 TRIM52Q96A61 297 aa21.39■■□□□ 1.01
LHX6-208ENST00000558672 ROBO2Q9HCK4 1378 aa21.37■■□□□ 1.01
LHX6-208ENST00000558672 AFF2P51816 1311 aa21.37■■□□□ 1.01
LHX6-208ENST00000558672 DDX17Q92841 729 aaKnown RBP21.37■■□□□ 1.01
LHX6-208ENST00000558672 NUTM2BA6NNL0 878 aaPredicted RBP21.36■■□□□ 1.01
LHX6-208ENST00000558672 NUTM2EB1AL46 878 aaPredicted RBP21.36■■□□□ 1.01
LHX6-208ENST00000558672 NUTM2AQ8IVF1 878 aaPredicted RBP21.36■■□□□ 1.01
LHX6-208ENST00000558672 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
LHX6-208ENST00000558672 RGS12O14924 1447 aa21.36■■□□□ 1.01
LHX6-208ENST00000558672 RXRBP28702 533 aa21.34■■□□□ 1.01
LHX6-208ENST00000558672 LRRC59Q96AG4 307 aaKnown RBP21.34■■□□□ 1.01
LHX6-208ENST00000558672 COL22A1Q8NFW1 1626 aaPredicted RBP21.33■■□□□ 1.01
LHX6-208ENST00000558672 CDC42BPGQ6DT37 1551 aa21.31■■□□□ 1
LHX6-208ENST00000558672 SOS2Q07890 1332 aaPredicted RBP21.3■■□□□ 1
LHX6-208ENST00000558672 IFT172Q9UG01 1749 aa21.29■■□□□ 1
LHX6-208ENST00000558672 C8orf37Q96NL8 207 aa21.27■■□□□ 1
LHX6-208ENST00000558672 RPGRIP1LQ68CZ1 1315 aa21.27■□□□□ 0.99
LHX6-208ENST00000558672 VGFO15240 615 aaPredicted RBP21.26■□□□□ 0.99
LHX6-208ENST00000558672 KNDC1Q76NI1 1749 aa21.25■□□□□ 0.99
LHX6-208ENST00000558672 ORAI2Q96SN7 254 aa21.25■□□□□ 0.99
LHX6-208ENST00000558672 MARF1Q9Y4F3 1742 aaKnown RBP21.25■□□□□ 0.99
LHX6-208ENST00000558672 MYOM2P54296 1465 aa21.25■□□□□ 0.99
LHX6-208ENST00000558672 TECPR2O15040 1411 aa21.24■□□□□ 0.99
LHX6-208ENST00000558672 RBM6P78332 1123 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms