RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 SLC26A8Q96RN1 970 aa23.04■■□□□ 1.28
IDH3A-205ENST00000558509 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
IDH3A-205ENST00000558509 RBM33Q96EV2 1170 aaKnown RBP23.01■■□□□ 1.27
IDH3A-205ENST00000558509 CHD2O14647 1828 aaKnown RBP23.01■■□□□ 1.27
IDH3A-205ENST00000558509 TMEM94Q12767 1356 aa23.01■■□□□ 1.27
IDH3A-205ENST00000558509 ROCK1Q13464 1354 aa23■■□□□ 1.27
IDH3A-205ENST00000558509 SLC52A1Q9NWF4 448 aa22.98■■□□□ 1.27
IDH3A-205ENST00000558509 RIMS2Q9UQ26 1411 aa22.98■■□□□ 1.27
IDH3A-205ENST00000558509 ROBO1Q9Y6N7 1651 aa22.97■■□□□ 1.27
IDH3A-205ENST00000558509 NKTRP30414 1462 aaKnown RBP22.96■■□□□ 1.27
IDH3A-205ENST00000558509 KCNA6P17658 529 aa22.95■■□□□ 1.26
IDH3A-205ENST00000558509 PLEKHG1Q9ULL1 1385 aa22.94■■□□□ 1.26
IDH3A-205ENST00000558509 ITGAEP38570 1179 aa22.93■■□□□ 1.26
IDH3A-205ENST00000558509 SPHKAPQ2M3C7 1700 aa22.92■■□□□ 1.26
IDH3A-205ENST00000558509 ADAMTS13Q76LX8 1427 aa22.91■■□□□ 1.26
IDH3A-205ENST00000558509 NUTM2DQ5VT03 806 aaPredicted RBP22.89■■□□□ 1.25
IDH3A-205ENST00000558509 PROSER2Q86WR7 435 aaPredicted RBP22.89■■□□□ 1.25
IDH3A-205ENST00000558509 FAM135BQ49AJ0 1406 aa22.89■■□□□ 1.25
IDH3A-205ENST00000558509 NRXN3Q9Y4C0 1643 aa22.88■■□□□ 1.25
IDH3A-205ENST00000558509 NUP155O75694 1391 aa22.88■■□□□ 1.25
IDH3A-205ENST00000558509 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
IDH3A-205ENST00000558509 BCANQ96GW7 911 aa22.86■■□□□ 1.25
IDH3A-205ENST00000558509 DIP2AQ14689 1571 aa22.84■■□□□ 1.25
IDH3A-205ENST00000558509 PPP1R15AO75807 674 aaPredicted RBP22.83■■□□□ 1.25
IDH3A-205ENST00000558509 CLTCL1P53675 1640 aa22.82■■□□□ 1.24
IDH3A-205ENST00000558509 PHLPP1O60346 1717 aa22.82■■□□□ 1.24
IDH3A-205ENST00000558509 RGS17Q9UGC6 210 aaPredicted RBP22.82■■□□□ 1.24
IDH3A-205ENST00000558509 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.82■■□□□ 1.24
IDH3A-205ENST00000558509 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
IDH3A-205ENST00000558509 PTPRUQ92729 1446 aa22.81■■□□□ 1.24
IDH3A-205ENST00000558509 MSH6P52701 1360 aa22.79■■□□□ 1.24
IDH3A-205ENST00000558509 XRN1Q8IZH2 1706 aaKnown RBP22.79■■□□□ 1.24
IDH3A-205ENST00000558509 COL16A1Q07092 1604 aaPredicted RBP22.79■■□□□ 1.24
IDH3A-205ENST00000558509 TBX22Q9Y458 520 aa22.78■■□□□ 1.24
IDH3A-205ENST00000558509 TRPM2O94759 1503 aa22.77■■□□□ 1.24
IDH3A-205ENST00000558509 NAIPQ13075 1403 aa22.76■■□□□ 1.23
IDH3A-205ENST00000558509 SETBP1Q9Y6X0 1596 aa22.76■■□□□ 1.23
IDH3A-205ENST00000558509 NEXMIFQ5QGS0 1516 aa22.74■■□□□ 1.23
IDH3A-205ENST00000558509 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.74■■□□□ 1.23
IDH3A-205ENST00000558509 KIF1BO60333 1816 aa22.71■■□□□ 1.23
IDH3A-205ENST00000558509 SLAIN2Q9P270 581 aa22.71■■□□□ 1.23
IDH3A-205ENST00000558509 HDGFP51858 240 aaKnown RBP22.7■■□□□ 1.22
IDH3A-205ENST00000558509 PIK3R4Q99570 1358 aa22.7■■□□□ 1.22
IDH3A-205ENST00000558509 SETD1AO15047 1707 aaKnown RBP22.7■■□□□ 1.22
IDH3A-205ENST00000558509 NCOA3Q9Y6Q9 1424 aa22.68■■□□□ 1.22
IDH3A-205ENST00000558509 AHDC1Q5TGY3 1603 aaPredicted RBP22.68■■□□□ 1.22
IDH3A-205ENST00000558509 NALCNQ8IZF0 1738 aa22.67■■□□□ 1.22
IDH3A-205ENST00000558509 LRP6O75581 1613 aa22.67■■□□□ 1.22
IDH3A-205ENST00000558509 METP08581 1390 aa22.66■■□□□ 1.22
IDH3A-205ENST00000558509 AMOTL2Q9Y2J4 779 aa22.66■■□□□ 1.22
IDH3A-205ENST00000558509 POTEAQ6S8J7 498 aa22.65■■□□□ 1.22
IDH3A-205ENST00000558509 SHPRHQ149N8 1683 aa22.64■■□□□ 1.21
IDH3A-205ENST00000558509 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
IDH3A-205ENST00000558509 C14orf37Q86TY3 774 aa22.62■■□□□ 1.21
IDH3A-205ENST00000558509 JCADQ9P266 1359 aa22.62■■□□□ 1.21
IDH3A-205ENST00000558509 ZNF326Q5BKZ1 582 aaKnown RBP22.61■■□□□ 1.21
IDH3A-205ENST00000558509 PPLO60437 1756 aa22.61■■□□□ 1.21
IDH3A-205ENST00000558509 NHSL1Q5SYE7 1610 aa22.6■■□□□ 1.21
IDH3A-205ENST00000558509 C19orf44Q9H6X5 657 aa22.6■■□□□ 1.21
IDH3A-205ENST00000558509 ASXL1Q8IXJ9 1541 aa22.59■■□□□ 1.21
IDH3A-205ENST00000558509 MST1RQ04912 1400 aa22.58■■□□□ 1.21
IDH3A-205ENST00000558509 DCCP43146 1447 aa22.57■■□□□ 1.2
IDH3A-205ENST00000558509 BRINP3Q76B58 766 aa22.56■■□□□ 1.2
IDH3A-205ENST00000558509 CADPS2Q86UW7 1296 aa22.56■■□□□ 1.2
IDH3A-205ENST00000558509 ATF3P18847 181 aa22.55■■□□□ 1.2
IDH3A-205ENST00000558509 ADGRL3Q9HAR2 1447 aa22.54■■□□□ 1.2
IDH3A-205ENST00000558509 TRIM52Q96A61 297 aa22.52■■□□□ 1.2
IDH3A-205ENST00000558509 IFT172Q9UG01 1749 aa22.51■■□□□ 1.19
IDH3A-205ENST00000558509 FOXD1Q16676 465 aa22.5■■□□□ 1.19
IDH3A-205ENST00000558509 ROBO2Q9HCK4 1378 aa22.49■■□□□ 1.19
IDH3A-205ENST00000558509 DDX17Q92841 729 aaKnown RBP22.48■■□□□ 1.19
IDH3A-205ENST00000558509 SLC4A1APQ9BWU0 796 aaKnown RBP22.47■■□□□ 1.19
IDH3A-205ENST00000558509 PTCH1Q13635 1447 aa22.47■■□□□ 1.19
IDH3A-205ENST00000558509 SPATA31A6Q5VVP1 1343 aa22.46■■□□□ 1.19
IDH3A-205ENST00000558509 LAMC1P11047 1609 aa22.46■■□□□ 1.19
IDH3A-205ENST00000558509 PRAG1Q86YV5 1406 aa22.45■■□□□ 1.18
IDH3A-205ENST00000558509 SETD5Q9C0A6 1442 aa22.44■■□□□ 1.18
IDH3A-205ENST00000558509 C1orf167Q5SNV9 1468 aa22.42■■□□□ 1.18
IDH3A-205ENST00000558509 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
IDH3A-205ENST00000558509 ADGRF5Q8IZF2 1346 aa22.38■■□□□ 1.17
IDH3A-205ENST00000558509 NUTM2BA6NNL0 878 aaPredicted RBP22.38■■□□□ 1.17
IDH3A-205ENST00000558509 NUTM2EB1AL46 878 aaPredicted RBP22.38■■□□□ 1.17
IDH3A-205ENST00000558509 NUTM2AQ8IVF1 878 aaPredicted RBP22.38■■□□□ 1.17
IDH3A-205ENST00000558509 PNPLA6Q8IY17 1366 aa22.38■■□□□ 1.17
IDH3A-205ENST00000558509 VGFO15240 615 aaPredicted RBP22.37■■□□□ 1.17
IDH3A-205ENST00000558509 MEX3CQ5U5Q3 659 aaKnown RBP22.37■■□□□ 1.17
IDH3A-205ENST00000558509 RPGRIP1LQ68CZ1 1315 aa22.36■■□□□ 1.17
IDH3A-205ENST00000558509 KNDC1Q76NI1 1749 aa22.36■■□□□ 1.17
IDH3A-205ENST00000558509 CDC42BPGQ6DT37 1551 aa22.35■■□□□ 1.17
IDH3A-205ENST00000558509 CCDC144AA2RUR9 1427 aa22.34■■□□□ 1.17
IDH3A-205ENST00000558509 ORAI2Q96SN7 254 aa22.34■■□□□ 1.17
IDH3A-205ENST00000558509 MPHOSPH9Q99550 1183 aa22.31■■□□□ 1.16
IDH3A-205ENST00000558509 AFF2P51816 1311 aa22.31■■□□□ 1.16
IDH3A-205ENST00000558509 RGL3Q3MIN7 710 aa22.3■■□□□ 1.16
IDH3A-205ENST00000558509 PLEKHH1Q9ULM0 1364 aa22.29■■□□□ 1.16
IDH3A-205ENST00000558509 COL22A1Q8NFW1 1626 aaPredicted RBP22.29■■□□□ 1.16
IDH3A-205ENST00000558509 ZNF772Q68DY9 489 aaPredicted RBP22.29■■□□□ 1.16
IDH3A-205ENST00000558509 TECPR2O15040 1411 aa22.29■■□□□ 1.16
IDH3A-205ENST00000558509 PIK3C2GO75747 1445 aa22.29■■□□□ 1.16
IDH3A-205ENST00000558509 LRRC59Q96AG4 307 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms