RNA–Protein interactions for RNA: ENST00000558438.1

TTC23-213, Transcript of tetratricopeptide repeat domain 23, humanhuman

TSL 2

Gene TTC23, Length 424 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC23-213ENST00000558438 XIRP1Q702N8 1843 aaKnown RBP20.04■□□□□ 0.8
TTC23-213ENST00000558438 ADGRB3O60242 1522 aa20.03■□□□□ 0.8
TTC23-213ENST00000558438 PTPN23Q9H3S7 1636 aa20.03■□□□□ 0.8
TTC23-213ENST00000558438 PPP1R15AO75807 674 aaPredicted RBP20.03■□□□□ 0.8
TTC23-213ENST00000558438 ZNF772Q68DY9 489 aaPredicted RBP20.03■□□□□ 0.8
TTC23-213ENST00000558438 TBX22Q9Y458 520 aa20.03■□□□□ 0.8
TTC23-213ENST00000558438 NWD1Q149M9 1564 aa20.03■□□□□ 0.8
TTC23-213ENST00000558438 CROCC2H7BZ55 1655 aa20.03■□□□□ 0.8
TTC23-213ENST00000558438 FGD6Q6ZV73 1430 aa20.02■□□□□ 0.8
TTC23-213ENST00000558438 CADPS2Q86UW7 1296 aa20.02■□□□□ 0.8
TTC23-213ENST00000558438 ROBO1Q9Y6N7 1651 aa20.02■□□□□ 0.8
TTC23-213ENST00000558438 PIK3R4Q99570 1358 aa20■□□□□ 0.79
TTC23-213ENST00000558438 C19orf44Q9H6X5 657 aa19.98■□□□□ 0.79
TTC23-213ENST00000558438 ADGRL2O95490 1459 aa19.97■□□□□ 0.79
TTC23-213ENST00000558438 ATF3P18847 181 aa19.96■□□□□ 0.79
TTC23-213ENST00000558438 C14orf37Q86TY3 774 aa19.96■□□□□ 0.79
TTC23-213ENST00000558438 CHIC2Q9UKJ5 165 aa19.96■□□□□ 0.79
TTC23-213ENST00000558438 ZFYVE9O95405 1425 aa19.95■□□□□ 0.78
TTC23-213ENST00000558438 MEX3CQ5U5Q3 659 aaKnown RBP19.95■□□□□ 0.78
TTC23-213ENST00000558438 ANKRD50Q9ULJ7 1429 aa19.94■□□□□ 0.78
TTC23-213ENST00000558438 RIMS2Q9UQ26 1411 aa19.93■□□□□ 0.78
TTC23-213ENST00000558438 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
TTC23-213ENST00000558438 PHLPP1O60346 1717 aa19.92■□□□□ 0.78
TTC23-213ENST00000558438 RBM33Q96EV2 1170 aaKnown RBP19.91■□□□□ 0.78
TTC23-213ENST00000558438 DIP2AQ14689 1571 aa19.91■□□□□ 0.78
TTC23-213ENST00000558438 CHD2O14647 1828 aaKnown RBP19.88■□□□□ 0.77
TTC23-213ENST00000558438 DCCP43146 1447 aa19.87■□□□□ 0.77
TTC23-213ENST00000558438 RXRBP28702 533 aa19.87■□□□□ 0.77
TTC23-213ENST00000558438 AHDC1Q5TGY3 1603 aaPredicted RBP19.85■□□□□ 0.77
TTC23-213ENST00000558438 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
TTC23-213ENST00000558438 CDK12Q9NYV4 1490 aaPredicted RBP19.85■□□□□ 0.77
TTC23-213ENST00000558438 COL16A1Q07092 1604 aaPredicted RBP19.84■□□□□ 0.77
TTC23-213ENST00000558438 CHGAP10645 457 aaKnown RBP19.84■□□□□ 0.77
TTC23-213ENST00000558438 TMEM131LA2VDJ0 1609 aa19.84■□□□□ 0.77
TTC23-213ENST00000558438 UPF1Q92900 1129 aaKnown RBP eCLIP19.83■□□□□ 0.77
TTC23-213ENST00000558438 FOXD1Q16676 465 aa19.82■□□□□ 0.76
TTC23-213ENST00000558438 LRRC59Q96AG4 307 aaKnown RBP19.81■□□□□ 0.76
TTC23-213ENST00000558438 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
TTC23-213ENST00000558438 ADAMTS13Q76LX8 1427 aa19.81■□□□□ 0.76
TTC23-213ENST00000558438 ROCK1Q13464 1354 aa19.81■□□□□ 0.76
TTC23-213ENST00000558438 TRPM2O94759 1503 aa19.81■□□□□ 0.76
TTC23-213ENST00000558438 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
TTC23-213ENST00000558438 SHPRHQ149N8 1683 aa19.78■□□□□ 0.76
TTC23-213ENST00000558438 GCC2Q8IWJ2 1684 aa19.78■□□□□ 0.76
TTC23-213ENST00000558438 SETD5Q9C0A6 1442 aa19.77■□□□□ 0.76
TTC23-213ENST00000558438 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
TTC23-213ENST00000558438 LRP6O75581 1613 aa19.76■□□□□ 0.75
TTC23-213ENST00000558438 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.75■□□□□ 0.75
TTC23-213ENST00000558438 UNC13BO14795 1591 aa19.74■□□□□ 0.75
TTC23-213ENST00000558438 NGLY1Q96IV0 654 aa19.73■□□□□ 0.75
TTC23-213ENST00000558438 RBM6P78332 1123 aaKnown RBP19.72■□□□□ 0.75
TTC23-213ENST00000558438 NUP155O75694 1391 aa19.71■□□□□ 0.75
TTC23-213ENST00000558438 NUTM2BA6NNL0 878 aaPredicted RBP19.71■□□□□ 0.75
TTC23-213ENST00000558438 NUTM2EB1AL46 878 aaPredicted RBP19.71■□□□□ 0.75
TTC23-213ENST00000558438 NUTM2AQ8IVF1 878 aaPredicted RBP19.71■□□□□ 0.75
TTC23-213ENST00000558438 AFF2P51816 1311 aa19.71■□□□□ 0.75
TTC23-213ENST00000558438 NUTM2DQ5VT03 806 aaPredicted RBP19.69■□□□□ 0.74
TTC23-213ENST00000558438 ASXL1Q8IXJ9 1541 aa19.69■□□□□ 0.74
TTC23-213ENST00000558438 IQGAP3Q86VI3 1631 aa19.69■□□□□ 0.74
TTC23-213ENST00000558438 SETD1AO15047 1707 aaKnown RBP19.68■□□□□ 0.74
TTC23-213ENST00000558438 MYO5BQ9ULV0 1848 aa19.68■□□□□ 0.74
TTC23-213ENST00000558438 SETBP1Q9Y6X0 1596 aa19.68■□□□□ 0.74
TTC23-213ENST00000558438 QTRT2Q9H974 415 aaKnown RBP19.67■□□□□ 0.74
TTC23-213ENST00000558438 MST1RQ04912 1400 aa19.67■□□□□ 0.74
TTC23-213ENST00000558438 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
TTC23-213ENST00000558438 PTPRUQ92729 1446 aa19.66■□□□□ 0.74
TTC23-213ENST00000558438 E9PCH4 1651 aa19.65■□□□□ 0.74
TTC23-213ENST00000558438 ADGRL3Q9HAR2 1447 aa19.65■□□□□ 0.74
TTC23-213ENST00000558438 C8orf37Q96NL8 207 aa19.64■□□□□ 0.73
TTC23-213ENST00000558438 ATAD2Q6PL18 1390 aa19.61■□□□□ 0.73
TTC23-213ENST00000558438 PNPLA6Q8IY17 1366 aa19.61■□□□□ 0.73
TTC23-213ENST00000558438 VGFO15240 615 aaPredicted RBP19.61■□□□□ 0.73
TTC23-213ENST00000558438 CCDC125Q86Z20 511 aa19.61■□□□□ 0.73
TTC23-213ENST00000558438 XRN1Q8IZH2 1706 aaKnown RBP19.61■□□□□ 0.73
TTC23-213ENST00000558438 NHSL1Q5SYE7 1610 aa19.59■□□□□ 0.73
TTC23-213ENST00000558438 TRPC5Q9UL62 973 aaPredicted RBP19.59■□□□□ 0.73
TTC23-213ENST00000558438 METP08581 1390 aa19.58■□□□□ 0.73
TTC23-213ENST00000558438 PTCH1Q13635 1447 aa19.57■□□□□ 0.72
TTC23-213ENST00000558438 RPGRIP1LQ68CZ1 1315 aa19.56■□□□□ 0.72
TTC23-213ENST00000558438 SOS2Q07890 1332 aaPredicted RBP19.55■□□□□ 0.72
TTC23-213ENST00000558438 RGS12O14924 1447 aa19.55■□□□□ 0.72
TTC23-213ENST00000558438 FNBP4Q8N3X1 1017 aaPredicted RBP19.55■□□□□ 0.72
TTC23-213ENST00000558438 USP21Q9UK80 565 aa19.55■□□□□ 0.72
TTC23-213ENST00000558438 C1orf167Q5SNV9 1468 aa19.54■□□□□ 0.72
TTC23-213ENST00000558438 ZRANB1Q9UGI0 708 aa19.54■□□□□ 0.72
TTC23-213ENST00000558438 PRAG1Q86YV5 1406 aa19.53■□□□□ 0.72
TTC23-213ENST00000558438 NRXN3Q9Y4C0 1643 aa19.53■□□□□ 0.72
TTC23-213ENST00000558438 HFM1A2PYH4 1435 aa19.52■□□□□ 0.72
TTC23-213ENST00000558438 ADAMTS2O95450 1211 aa19.52■□□□□ 0.72
TTC23-213ENST00000558438 LRPPRCP42704 1394 aaKnown RBP19.52■□□□□ 0.72
TTC23-213ENST00000558438 LAMC1P11047 1609 aa19.51■□□□□ 0.71
TTC23-213ENST00000558438 NPHP3Q7Z494 1330 aa19.51■□□□□ 0.71
TTC23-213ENST00000558438 SPHKAPQ2M3C7 1700 aa19.5■□□□□ 0.71
TTC23-213ENST00000558438 NEXMIFQ5QGS0 1516 aa19.47■□□□□ 0.71
TTC23-213ENST00000558438 ITGAEP38570 1179 aa19.47■□□□□ 0.71
TTC23-213ENST00000558438 DDX17Q92841 729 aaKnown RBP19.46■□□□□ 0.71
TTC23-213ENST00000558438 ORAI2Q96SN7 254 aa19.44■□□□□ 0.7
TTC23-213ENST00000558438 ATRNO75882 1429 aa19.43■□□□□ 0.7
TTC23-213ENST00000558438 ROBO2Q9HCK4 1378 aa19.43■□□□□ 0.7
TTC23-213ENST00000558438 NALCNQ8IZF0 1738 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms